Query= MSMg01no481_g03.b1 MSMg01no481_g03.b1 CHROMAT_FILE:
MSMg01no481_g03.b1 PHD_FILE: MSMg01no481_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:00 2005
(628 letters)
>mm_chr19_13792961_13793987
Length = 1027
Score = 1122 bits (580), Expect = 0.0
Identities = 616/628 (98%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 1 gactaagatcatctccatctgtgccacccatctcactgcaacattgccctacttttatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gactaagatcatctccatctgtgccacccatctcactgcaacattgccctacttttatca 260
Query: 61 ccatcatactcttttaattgagagatatctgagggtagacttcaaagaaaaatcaggtaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatcatactcttttaactgagagatatctgagggtagacttcaaagaaaaatcaggtaa 320
Query: 121 tgtccatgttctacataatgatattcccttgttgaatccccatatctacaggtaaagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtccatgttctacataatgatattcccttgttgaatccccatatctacaggtaaagaaa 380
Query: 181 gttctcaataaagtcaagctttcctaacaacttctcacattgggggcattttaggatatt 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttctcaatagagtcaagctttcctaacaacttctcacattgggggcattttaggatatt 440
Query: 241 gtcatttcagatcttatattgtttaggataatatacttgttatataaatgtatataatat 300
||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcatttcaaatcagatattatttaggataatatacttgttatataaatgtatataatat 500
Query: 301 gaacatggtttgtaaaagaggaaaaatatttaacttcatgcataggggagattatatgga 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 gaacatggtttgtaaaagaggaaaa-tatttaacttcatgcataggggagattatatgga 559
Query: 361 gaagacatttgagtgtgcactgtggctctaaggacacatacaatctaaatatggcaggtc 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaagacatttgagtgtacactgtggctctaaggacacatacaatctaaatatggcaggtc 619
Query: 421 tcaaagatctgtgatgatagactataatatttgaaaatatcctatgaaattttcattgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcaaagatctgtgatgatagactataatatttgaaaatatcctatgaaattttcattgta 679
Query: 481 taagagttgtgttggatataatgtttagtatattttatactcaatagatcctctaatttt 540
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 680 taggagttgtgttggatataatgtttagtatattttatactcaatagatcctgtaatttt 739
Query: 541 taatatttgtatagagtttctgactgtgggtaggcagatattcactgaattcaattcagg 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 taatatgtgtatagagtttctgactgtgggtaggcagatattcactgaattcaattcagg 799
Query: 601 aacaacaggatgtcttcctaatctgcca 628
||||||||||| ||||||||||||||||
Sbjct: 800 aacaacaggatatcttcctaatctgcca 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1027
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1017
Effective search space: 628506
Effective search space used: 628506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_g03.g1 MSMg01no481_g03.g1 CHROMAT_FILE:
MSMg01no481_g03.g1 PHD_FILE: MSMg01no481_g03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:00 2005
(630 letters)
>mm_chr19_13962342_13963371
Length = 1030
Score = 1137 bits (588), Expect = 0.0
Identities = 599/604 (99%), Gaps = 3/604 (0%)
Strand = Plus / Minus
Query: 27 ttatcttcagcaatgggatcctgatgtaaatttgagaaaattaatcaatttccttggcaa 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 ttatcttcagcaatgggatcctgatgtaaatttgagaaaattaatcaatttccttggcaa 969
Query: 87 taatctgaaatgtctggggctttttacttcgtctttctgttcaacagcttaagatgtaac 146
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 968 taatctgaaatgtctggggcttttcacttcgtctttctgttcaacagcttaagatgtaac 909
Query: 147 ctattatcagcatgggtgcttacatttagtgatgagagatgtataagttgacacctcgta 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 ctattatcagcatgggtgcttacatttagtgatgagagatgtataagttgacacctcgta 849
Query: 207 ttatttgatacttcttcttagtattttgactgtggtgttgtaatcttagtaaacaaggag 266
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ttatttgata---cttcttagtattttgactgtggtgttgtaatcttagtaaacaaggag 792
Query: 267 aaacacaaggtccagaaaggatgttcaaagtctgaaaactttttatctatactgttgtat 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 aaacacaaggtccagaaaggatgttcaaagtctgaaaactttttatctatactgttgtat 732
Query: 327 gaattgtttctgtgaaacctttttctggctgcacatgaattcaatatacaaccccaagta 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaattgtttctgtgaaacctttttctggctgcacatgaattcaatatacaaccccaagta 672
Query: 387 gtggacgtgcaaaaacttggaagtccctgagaaacttaatactagattggaatttgcctg 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtggacgtgcaaaaacttggaagtccctgagaaacttaatactagattggaatttgcctg 612
Query: 447 tttcctaattaagagaccttgtggggtgtttcagtcactttatctctttgtaattcttta 506
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 611 tttcctaattaagagaccttgtggggtgtgtcagtcactttatctctttgtaattcttta 552
Query: 507 gtcaaaagtgggattaacacaacatttttgtgctatgcaggatttttagttcaagcaaaa 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gtcaaaagtgggattaacacaacatttttgtgctatgcaggatttttagttcaagcaaaa 492
Query: 567 ctaagcttgtgaaagttgaaaagtattttgcaaatgaggctcattactgagaaccaagca 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctaagcttgtgaaagttgaaaagtattttgcaaatgaggctcattactgagaaccaagca 432
Query: 627 gttt 630
||||
Sbjct: 431 gttt 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
