Query= MSMg01no482_h01.b1 MSMg01no482_h01.b1 CHROMAT_FILE:
MSMg01no482_h01.b1 PHD_FILE: MSMg01no482_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:21 2005
(188 letters)
>mm_chr19_9097227_9097814
Length = 588
Score = 333 bits (172), Expect = 5e-96
Identities = 184/188 (97%)
Strand = Plus / Minus
Query: 1 ccactttcaaaatccccaaccagagatcacgccaaggccaagcatgccaccagcctccgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 388 ccactttcaaaatccccaaccagagatcacgccaaggccaagcatgccaccagcctccag 329
Query: 61 agcgcacttgccaaataaacttgcccaaacttggacttctcgcttgaaaacttacattta 120
|| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 328 agtgcacttgcgaaataaacttgcccaaacttggacttctcgcttgaaaacttagattta 269
Query: 121 cttgttaattctgaagggaaaacatggcaagattacaaggaagaagtctggcaagctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cttgttaattctgaagggaaaacatggcaagattacaaggaagaagtctggcaagctcct 209
Query: 181 acttaatt 188
||||||||
Sbjct: 208 acttaatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no482_h01.g1 MSMg01no482_h01.g1 CHROMAT_FILE:
MSMg01no482_h01.g1 PHD_FILE: MSMg01no482_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:21 2005
(458 letters)
>mm_chr19_8939571_8940428
Length = 858
Score = 526 bits (272), Expect = e-153
Identities = 287/292 (98%)
Strand = Plus / Plus
Query: 167 ctggttccaccttcaaacagctgtaaataggacgaccctaagcccacgctgggatatttc 226
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 367 ctggttccactttcaaacagctgtaaataggacgaccctaagcccacactgggatatttc 426
Query: 227 caaaggaaccgtgcctgcttcattctaccaagatacctcctagaaaattttctctatgca 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 caaaggaaccgtgcctgcttcattctaccaagatacctcctagaaaattttctctatgca 486
Query: 287 gattcctgtagccacacacagttgatcaaccccagaaatggtagatgaatgcatttccag 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gattcctgtagccacacacagttgatcaaccccagaaatggtagatgaatgcatttccag 546
Query: 347 gcccctgaaaccacttggcttgtttgctagtatttaacccagtgggcttttgagctcttt 406
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 547 gcccctgaaaccacttggcttgtttgctagtatttaacccagtgtgcttttgagctcttt 606
Query: 407 acagtaaggagaggaaactactttgcatcctcatgtatgtcacacctcagat 458
||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 607 acagtaaggagagcacactactttgcatcctcatgtatgtcacacctcagat 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
