XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTGAT
CTTTTTCCACTTTTATCATGAATGGGTGTTGGATCTTGTCAAATGCTTTT
TCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTAT
ATAATGGATTACATTGATGGATTTTCGTATATTAAACCATCCCTGCATCC
CTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTTAATGTGTTCT
TGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTGCATCGATATTCAT
AAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGGTCTTTCTGTGGTT
TAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTGGGTAGAGTACCT
TCTACTTCTATTTTGTGAAATAGTTTGTGCAGAATTGGAATTAGATCTTC
TTTGAAGGTCTGGTAGAACTCTGCACTAAACCCATCTGGTCCTGGGCTTT
TTTTGGTTGGGAGACTATTAATAACTGCTTCTATTTCTTTAGGTGATATG
GGACTGTTTAGATGGTCAACTTGATCCTGATTCAACTTTGGTACCTGGTA
TCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTTTCCAGTTTTGTTGAGT
ATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGGATTTCTTCAGGATCT
GTTGTTATGTCTCCCTTTTCATTTCTGATTTTGN

TGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCTTCCCAAATTCTTTTTCATTTGAGCTTTTAAAATATATTGTTTATGC
TTTGTGATCTGTATTTACTACAGTATTTTGAAACTGTTTTAAATATCTTT
GAAGACTTTGCAGCATTGAAAACCCTGCACTCTCTCTCTCTCTCTCTTTA
CACACACACACACACACACACACACACACACACACACAGAGAGAGAGAGA
GAGAGAGAGACATACATACATACATACATACATACATAATGGTGTCCCAG
GACTTAGACCATTATATTTTATATGAGGACTGGCACTCTGGGAGAACTAA
GTGAGATGCCAGCCAGATGGGCACTTCTTGCTTCAGTTTTGACCTCTGAC
ATAGCAGACAAGTAGCACAATGACGCCTATGGGCTGGAAGTTCTTTGGCT
CAAAGAGAATGAGTACTTAGCTGATTCATGATCCATGGTCCTCAGGAAGT
GCCTTAGCTCTGCAACACTTAATTCTTTATATATAAAACAAAACAAATAG
TGTCTGTCTGAAGACATTGTGTTACAGAGTAAACAGATTAATAAAGTAGA
AAATGATTATTCATTGAAGCACTACGCCATACAGGATATAAAGAAAAGGA
ACCACCTATTTTTTGCCCACAAGAAACACATGTCACCATCAAAGACAGGC
GTGACTTTAGAATAAAAGGATGGGAAAGGGTGTCCCAAGTAAATGAAC

Query= MSMg01no491_n19.g1 MSMg01no491_n19.g1 CHROMAT_FILE:
MSMg01no491_n19.g1 PHD_FILE: MSMg01no491_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:54 2005
         (605 letters)



>mm_chr19_22945416_22946416
          Length = 1001

 Score =  907 bits (469), Expect = 0.0
 Identities = 541/585 (92%), Gaps = 36/585 (6%)
 Strand = Plus / Minus

                                                                        
Query: 49   atttactacagtattttgaaactgttttaaatatctttgaagactttgcagcattgaaaa 108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 atttactacagtattttgaaactgttttaaatatctttgaagactttgcagcattgaaaa 942

                                                                        
Query: 109  ccctgcactctctctctctctctcttt--------------acacacacacacacacaca 154
            |||||||  ||||||||||| ||||||              |||||||||||||||||||
Sbjct: 941  ccctgca--ctctctctctcactctttacacacacacacacacacacacacacacacaca 884

                                                                        
Query: 155  cacacacacacacacacacagagagagagagagagagag------------agacataca 202
            |||||||||||||||||||||| ||||||||||||||||            | |||||||
Sbjct: 883  cacacacacacacacacacagaaagagagagagagagagatacatacatacatacataca 824

                                                                        
Query: 203  tacatacatacatacatacataatggtgtcccaggacttagaccattatat-ttt-atat 260
            |||||||||||||||||||||||||||||||||||||||      | |||| ||| ||||
Sbjct: 823  tacatacatacatacatacataatggtgtcccaggactt------tcatatctttgatat 770

                                                                        
Query: 261  gaggactggcactctgggagaactaagtgagatgccagccagatgggcacttcttgcttc 320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769  gaggactggcactctgggagaactaagtgagatgccagccagatgggcacttcttgcttc 710

                                                                        
Query: 321  agttttgacctctgacatagcagacaagtagcacaatgacgcctatgggctggaagttct 380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709  agttttgacctctgacatagcagacaagtagcacaatgacgcctatgggctggaagttct 650

                                                                        
Query: 381  ttggctcaaagagaatgagtacttagctgattcatgatccatggtcctcaggaagtgcct 440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649  ttggctcaaagagaatgagtacttagctgattcatgatccatggtcctcaggaagtgcct 590

                                                                        
Query: 441  tagctctgcaacacttaattctttatatataaaacaaaacaaatagtgtctgtctgaaga 500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589  tagctctgcaacacttaattctttatatataaaacaaaacaaatagtgtctgtctgaaga 530

                                                                        
Query: 501  cattgtgttacagagtaaacagattaataaagtagaaaatgattattcattgaagcacta 560
            |||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 529  cattgtgttatagagtaaacagattgataaaatagaaaatgattattcattgaagcacta 470

                                                         
Query: 561  cgccatacaggatataaagaaaaggaaccacctattttttgccca 605
            |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 469  cgccatacaggatataaagaaaaggaaccacctattttctgccca 425


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1001
Length adjustment: 10
Effective length of query: 595
Effective length of database: 991
Effective search space:   589645
Effective search space used:   589645
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)