Query= MSMg01no494_o19.b1 MSMg01no494_o19.b1 CHROMAT_FILE:
MSMg01no494_o19.b1 PHD_FILE: MSMg01no494_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:53 2005
(611 letters)
>mm_chr19_28604675_28605685
Length = 1011
Score = 1133 bits (586), Expect = 0.0
Identities = 604/612 (98%), Gaps = 5/612 (0%)
Strand = Plus / Plus
Query: 1 aattccattcttat-tgccaatctcccagaccccaagactcacctaaattttcaaaggaa 59
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aattccattcttaaatgtcaatctcccagaccccaagactcacctaaattttcaaaggaa 263
Query: 60 aaaacaaacaaacaaacaaacaaacaaacacaaacctgaacatttactttggaaagagca 119
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 264 aaaacaaacaaacaaacaaacaaaca----caaacctgaacatttactttggaaagagca 319
Query: 120 aaagcttgcttgtggctcagtgaatggtcccctccacttgaacagccatgcagttaagag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaagcttgcttgtggctcagtgaatggtcccctccacttgaacagccatgcagttaagag 379
Query: 180 aacaccacgtctgtgtcattctcacaatcccaaactaaagcagactggcctccactactt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aacaccacgtctgtgtcattctcacaatcccaaactaaagcagactggcctccactactt 439
Query: 240 ctggggcatgggaaccgagctagaactggagagaaaccagcagtcaccagctatcaaaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctggggcatgggaaccgagctagaactggagagaaaccagcagtcaccagctatcaaaga 499
Query: 300 atccttccccttgcaccagctagaggaagaggagagaaacctaataggtaccttgaccat 359
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atccttccccttgcaccagttagaggaagaggagagaaacctaataggtaccttgaccat 559
Query: 360 cacacatccaagtcccacagaaatagaaactcttacctgccttttctgtcctgtttgata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacacatccaagtcccacagaaatagaaactcttacctgccttttctgtcctgtttgata 619
Query: 420 aaatgcatgcatgacagtaagctggaccttccagagaggtggcccaggacctcggaaact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaatgcatgcatgacagtaagctggaccttccagagaggtggcccaggacctcggaaact 679
Query: 480 ccaactcaccgtacacttgttgggcttctccccagagtggaccctcatgtggatcagcag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ccaactcaccgtacacttgttgggcttctccccagagtggaccctcatgtggatcagcag 739
Query: 540 tttataccgtgcgttgaaaggcttgtatcttctagggcagccagtccagaagcacgtgaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttataccgtgcgttgaaaggcttgtatcttctagggcagccagtccagaagcacgtgaa 799
Query: 600 gtcttccccctt 611
||||||||||||
Sbjct: 800 gtcttccccctt 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_o19.g1 MSMg01no494_o19.g1 CHROMAT_FILE:
MSMg01no494_o19.g1 PHD_FILE: MSMg01no494_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:53 2005
(623 letters)
>mm_chr19_28783032_28784054
Length = 1023
Score = 826 bits (427), Expect = 0.0
Identities = 430/431 (99%)
Strand = Plus / Minus
Query: 1 cacctatcctcaagtcactgtaaggagcatttctcttccccattcatttattttgtatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cacctatcctcaagtcactgtaaggagcatttctcttccccattcatttattttgtatct 372
Query: 61 gtgtggatacccagactctctctgcaggcaatgttctataatgcgtgtcaatgtggtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gtgtggatacccagactctctctgcaggcaatgttctataatgcgtgtcaatgtggtctc 312
Query: 121 agtgctaacatggccatcactggccagtgaagtcccttctagttagctatgcttctttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agtgctaacatggccatcactggccagtgaagtcccttctagttagctatgcttctttca 252
Query: 181 cttcatttagaagctaaactctgggcactcatgtgctcacagttgcctgaatagttgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cttcatttagaagctaaactctgggcactcatgtgctcacagttgcctgaatagttgttt 192
Query: 241 cctttgtcgatacaacaaaacacccacaagcaccttaaggaaaggagggtttcttttcgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cctttgtcgatacaacaaaacacccacaagcaccttaaggaaaggagggtttcttttcgc 132
Query: 301 tcacagtttgaggtaaggcccagaatggcaaacaaagaatggccacatgtgggaaaggct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 131 tcacagtttgaggtaaggcccagaatggcaaacaaagaatggccacatgtgggagaggct 72
Query: 361 cttgatcctcacgtcacgtggcagccacaggtcacggggcagccacaggccacggggcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cttgatcctcacgtcacgtggcagccacaggtcacggggcagccacaggccacggggcag 12
Query: 421 ccacaggcagg 431
|||||||||||
Sbjct: 11 ccacaggcagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
