XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGAACACGATCCGCGGAAT
TCCAGGACTGCCAAAACTATACAGAGAAACCCTGTCTCAGAAAAACAAAA
CAGAAAAAAACACAATGGAATTTCTTCAGCCATAAAAAGTAGACTGATGT
CATTTTCAGGAAAATTAATACAAATGGAGACAATCACTTTAAGTGAAGTA
ATTCAGTCTCAGGAAGATAAATATTGCATGCTTTGGCTCATTTGTTTTTC
TTATATTTTATATATATATATATATATATATATATAAAACTAGGTATGTA
TATGTGAAATAAAATTATTTTTCAAAGCAAACATGCCCAAGAGAACAAGG
ACAAAAGGCAGAAGGCACTCCATTTACATGCTATACTTATATGAAGATGT
CCTTATGTGATGTGACTTAGTGCTATATTCAATAATGATACACAATGAAG
TATTCTTAAATCAAGAAATTAATTAATCCTTGTGCCCATTTGCCTACCTG
ATTCAGACTGGATCAAAGGGCAATTAATTCTACTTTCTCATCTCCAGGAT
CCCAGAGAGAATGGGCACCCTTTTAACACTCATTAGTCCTCCCCCGGACC
AGTTTGGGATCCAAATAACCCCTGGGGGGAAAACCCAAACTGGCCCAAGA
TCACATGGCTTTGGAAGCCCAATAAAAGGTTGGGGGGGTTAAAAGGGAGG
GCCCTTTCGGGGCCACCCCCTCCTTTTAACCACACTTN

NNNCCTCGATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAACCAAGGAAGCTTTG
ATCGTCTAGAGGACATAAGCTCTGACAAACCCAGAGTAGAGACCACTCTA
GTGGTATTTGAGAGCAGGTGAGATGTCACAGATTGAGCAGAGGCCAGTCC
TAGAAGCCAAACATTCTGCAGATTCAGCAGAGTTTGTTACTTGGTGGCCG
ATGGCTTGGCGTCAACCTAGTTACATCATTTTGTTAGACCCAATTTTTAC
AGCTCTCAGATGGTCTTAGTGATAGGTCCGTCACTGAGAAGTTTAGTCTG
AAATTATACATAAAGTGTGTAGCACAGAAATGGCTGGCATCGTGCAACAG
TTGCTTTGATTACTGATTCCATCACAAAGTAGAAAGAAACCACAACAAAC
AGTTAATAAAGCCTTGATCAGGAAATCTATAAAGGCTCCTTTTTTTGCAC
ATTCTTGAGATACTTTAGCCATGCCAAACCTCTGATTTCTTTAACAATGA
AGACAAACTCAGACACAGGTATCCAAGTCATAGGCTATCTCCTTCCCTTT
GTGTACATTTAGCTGCAAGGAGTTAGTGTTAGATCTTTGAGAACCACATG
TCCAAAGCCCCAGCAAGGACAATGCCTCTGCCCCTAGTCCCAGCTGCAGA
TGGCTACTCTATCAGTCATCCTCACAGCCTCCAGCACATCACTGTGGCAT
CCAN

Query= MSMg01no495_d08.g1 MSMg01no495_d08.g1 CHROMAT_FILE:
MSMg01no495_d08.g1 PHD_FILE: MSMg01no495_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:14 2005
         (572 letters)



>mm_chr19_18032251_18033226
          Length = 976

 Score =  996 bits (515), Expect = 0.0
 Identities = 560/577 (97%), Gaps = 6/577 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaccaaggaagctttgatcgtctagaggacataagctctgacaaacccagagtagaga 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaccaaggaagccttgatcgtctagaggacataagctctgacaaacccagagtagaga 260

                                                                       
Query: 61  ccactctagtggtatttgagagcaggtgagatgtcacagattgagcagaggccagtccta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccactctagtggtatttgagagcaggtgagatgtcacagattgagcagaggccagtccta 320

                                                                       
Query: 121 gaagccaaacattctgcagattcagcagagtttgttacttggtggccgatggcttggcgt 180
           | |||||||||| |||||||| |||| |||||||| |||||||||| |||||||||||||
Sbjct: 321 ggagccaaacatcctgcagatccagcggagtttgtcacttggtggctgatggcttggcgt 380

                                                                       
Query: 181 caacctagttacatcattttgttagacccaatttttacagctctcagatggtcttagtga 240
           ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 caatctagttacatcattttgttagacccaatttttacagctctcagatagtcttagtga 440

                                                                       
Query: 241 taggtccgtcactgagaagtttagtctgaaattatacataaagtgtgtagcacagaaatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggtccgtcactgagaagtttagtctgaaattatacataaagtgtgtagcacagaaatg 500

                                                                       
Query: 301 gctggcatcgtgcaacagttgctttgattactgattccatcacaaagtagaaagaaacca 360
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctggcatcatgcaacagttgctttgattactgattccatcacaaagtagaaagaaacca 560

                                                                       
Query: 361 caacaaacagttaataaagccttgatcaggaaatctataaaggctccttttttt-gcaca 419
           |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||
Sbjct: 561 caacaaacagttaataaagccttgatcaggaaatctttaa-ggctccttttttttgcaca 619

                                                                       
Query: 420 ttcttgagatactttagccatgccaaacctctgatttctttaacaat----gaagacaaa 475
           |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||
Sbjct: 620 ttcttgagatactttagccatgccaaacctctgatttctttaacaattaatgaagacaaa 679

                                                                       
Query: 476 ctcagacacaggtatccaagtcataggctatctccttccctttgtgtacatttagctgca 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctcagacacaggtatccaagtcataggctatctccttccctttgtgtacatttagctgca 739

                                                
Query: 536 aggagttagtgttagatctttgagaaccacatgtcca 572
           |||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggagttagtgttagatctttgagaaccacatgtcca 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 976
Length adjustment: 10
Effective length of query: 562
Effective length of database: 966
Effective search space:   542892
Effective search space used:   542892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)