Query= MSMg01no503_p18.b1 MSMg01no503_p18.b1 CHROMAT_FILE:
MSMg01no503_p18.b1 PHD_FILE: MSMg01no503_p18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:26 2005
(438 letters)
>mm_chr19_52513526_52514363
Length = 838
Score = 793 bits (410), Expect = 0.0
Identities = 431/438 (98%)
Strand = Plus / Plus
Query: 1 tggaggctcagagatgtcctcaccagatatcaaacctttagtgccttgataatggacttt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tggaggctcagagatgtcctcaccagatatcaaacctttggtgccttgataatggacttt 260
Query: 61 ctagcctccaaaactatgagaaattaattactcagtgtagtatctccaaatggactaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagcctccaaaactatgagaaattaattactcagtgtagtatctccaaatggactaaaa 320
Query: 121 cagtaatacagagcattggcccaggaaaatgaatgctagctgtagccaatgtcatgaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtaatacagagcattggcccaggaaaatgaatgctagctgtagccaatgtcatgaaat 380
Query: 181 gaagccatcagggaaatcaccttgtttctctgaagaggaaaagactaggggaaaaactga 240
|||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 381 gaagccatcaggtaaatcaccttgttcctctgaagaggaaaagactagggggaaaactga 440
Query: 241 tctgttttgcagattagtgtagaatcagtgccttagtctaaaatcaccaagaaaatagat 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctgttttgaagattagtgtagaatcagtgccttagtctaaaatcaccaagaaaatagat 500
Query: 301 caaacatgggattgatagaaaatgaaaattattacttgtggcaacagaaaagatgctaag 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaacatgggaatgatagaaaatgaaaattattacttgtggcaacagaaaagatgctaag 560
Query: 361 ttctcttctgatttctattccgtagcctccttgtcatcatttgggaagagattgagatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctcttctgatttctattccgtagcctccttgtcatcatttgggaagagattgagatgt 620
Query: 421 gtccagtggcatttagtg 438
||||||||||||||||||
Sbjct: 621 gtccagtggcatttagtg 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_p18.g1 MSMg01no503_p18.g1 CHROMAT_FILE:
MSMg01no503_p18.g1 PHD_FILE: MSMg01no503_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:26 2005
(109 letters)
>mm_chr19_52649939_52650448
Length = 510
Score = 205 bits (106), Expect = 6e-58
Identities = 109/110 (99%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 1 agctgtatcttcttggaggtgcatttaatgacactgtga-ttttttttctggaatatgag 59
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 310 agctgtatcttcttggaggtgcatttaatgacactgtgatttttttttctggaatatgag 251
Query: 60 gagtgtaaggggtgtttgagtcatgggagaatgaaagatttgggatgatg 109
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gagtgtaaggggtgtttgagtcatgggagaatgaaagatttgggatgatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 510
Length adjustment: 8
Effective length of query: 101
Effective length of database: 502
Effective search space: 50702
Effective search space used: 50702
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
