Query= MSMg01no510_p23.b1 MSMg01no510_p23.b1 CHROMAT_FILE:
MSMg01no510_p23.b1 PHD_FILE: MSMg01no510_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:44 2005
(648 letters)
>mm_chr19_45432570_45433617
Length = 1048
Score = 1199 bits (620), Expect = 0.0
Identities = 641/648 (98%)
Strand = Plus / Minus
Query: 1 ggaattcaaatatttgtacccccaccccttgtgaaatttttatgcaaatgttttaatctc 60
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ggaattcaaatatttttaccctcaccccttgtgaaatttttatgcaaatgttttaatctc 925
Query: 61 ctcctcaactaataaaccctttctttattcccacaaaagtccacttgtattcctggaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ctcctcaactaataaaccctttctttattcccacaaaagtccacttgtattcctggaatc 865
Query: 121 tgatatagcctgaggccctgaccactgtctccttggaacaaccctttcccttccctagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tgatatagcctgaggccctgaccactgtctccttggaacaaccctttcccttccctagat 805
Query: 181 tttctcttcagtttaagtacagaacttactctgcagatcaggctggcctcgaactcaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tttctcttcagtttaagtacagaacttactctgcagatcaggctggcctcgaactcaggg 745
Query: 241 atccacctgcctctgtctcccgagtgtggaggttaaaggcatgtgccaccactcccgaag 300
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 744 atccacctgcctctgtctcccgagtgtggaggttaaaggcgtgtaccaccactcccgaag 685
Query: 301 agtgtttatttttttcaacatttattcttttcagttacacggatgtgtactttacatgtt 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agtgcttatttttttcaacatttattcttttcagttacacggatgtgtactttacatgtt 625
Query: 361 tgtctgtctgtatgacagtgctgaaaagcaaacttagctcctcaggcattctaagcaagt 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtctgtctggatgacagtgctgaaaagcaaacttagctcctcaggcattctaagcaagt 565
Query: 421 gccccaaagctgagttacactcaactcacaattgtgtacattttagagtttccagatgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccccaaagctgagttacactcaactcacaattgtgtacattttagagtttccagatgtc 505
Query: 481 agaggccaataccaggcatggtggtatactgcttgttattctgacactcaggaggtagaa 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 agaggccaataccaggcatggtggtatactgcttgttattctgatactcaggaggtagaa 445
Query: 541 gcaggagccagggtcatcttgccaatgctagaaataagtttggggtcaaaaaggaggaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcaggagccagggtcatcttgccaatgctagaaataagtttggggtcaaaaaggaggaga 385
Query: 601 ctacatagaaaagccctgtctcaaaagacaagacaaaacaaacaaaca 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctacatagaaaagccctgtctcaaaagacaagacaaaacaaacaaaca 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_p23.g1 MSMg01no510_p23.g1 CHROMAT_FILE:
MSMg01no510_p23.g1 PHD_FILE: MSMg01no510_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:44 2005
(316 letters)
>mm_chr19_45296182_45296897
Length = 716
Score = 590 bits (305), Expect = e-173
Identities = 314/317 (99%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 1 gatgagaaaacagactctaaatgtctagtccctcccagagcatctgagggagccggccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatgagaaaacagactctaaatgtctagtccctcccagagcatctgagggagccggccat 260
Query: 61 tctcttcctttccagagtcaatctctcatcccctcccaaccccaccccatcccaggcagc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tctcttcctttccagagtcaatctctcatcccctcccacccccaccccatcccaggcagc 320
Query: 121 ctgtaattggaaaaactttgtcttgtaacttgtgtgacccctctccagtcttttccatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtaattggaaaaactttgtcttgtaacttgtgtgacccctctccagtcttttccatct 380
Query: 181 tctgaggtttgacccaaagcg-ccccctatcccttcccattccttattttgtgatttcag 239
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tctgaggtttgacccaaagcgtccccc-atcccttcccattccttattttgtgatttcag 439
Query: 240 tcggacttggggaaggaagaccatcaaaggtcccaaagtagcctcgtggctagttgggca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcggacttggggaaggaagaccatcaaaggtcccaaagtagcctcgtggctagttgggca 499
Query: 300 agcattaatcacattca 316
|||||||||||||||||
Sbjct: 500 agcattaatcacattca 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
