Query= MSMg01no511_a08.b1 MSMg01no511_a08.b1 CHROMAT_FILE:
MSMg01no511_a08.b1 PHD_FILE: MSMg01no511_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:46 2005
(600 letters)
>mm_chr19_60605726_60606726
Length = 1001
Score = 1127 bits (583), Expect = 0.0
Identities = 592/595 (99%), Gaps = 1/595 (0%)
Strand = Plus / Minus
Query: 6 aatgaggtggaata-acaggccagagccttgacactggactgggaaatgaattggaattg 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aatgaggtggaaaagacaggccagagccttgacactggactgggaaatgaattggaattg 741
Query: 65 attttgaactaatggaaagctatgatgggttttaatcagaggtgtgaactatcttactta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 attttgaactaatggaaagctatgatgggttttaatcagaggtgtgaactatcttactta 681
Query: 125 tacctttatatatgttgctcttatcaagaataataggaagcttgaagatagtgtggggat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tacctttatatatgttgctcttatcaagaataataggaagcttgaagatagtgtggggat 621
Query: 185 ggagctgaacgtatattgtattgtggatatggtaaattttcattatgtctctaatgataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggagctgaacgtatattgtattgtggatatggtaaattttcattatgtctctaatgataa 561
Query: 245 agatgctgggccttcaaatctcagaaatcagagctgcctataaatctgagtgagagccac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agatgctgggccttcaaatctcagaaatcagagctgcctataaatctgagtgagagccac 501
Query: 305 agagctggtatgctctgcatcttagaaaagaaggaagaatgtatatagagaagaaaaagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agagctggtatgctctgcatcttagaaaagaaggaagaatgtatatagagaagaaaaagt 441
Query: 365 ggcttgtgacattattcagcagagccaacaacagtgaataggagaaagctcagaagaagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggcttgtgacattattcagcagagccaacaacagtgaataggagaaagctcagaagaagc 381
Query: 425 taagaaaagaaagagttcaggaaagatggtttgagtttcatctttggttgactaacaagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taagaaaagaaagagttcaggaaagatggtttgagtttcatctttggttgactaacaagc 321
Query: 485 aactggcgcccttactactcattgcttaagcattggagtctgagttagtgtctgggaagc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aactggcgcccttactactcattgcttaagcattggagtctgagttagtgtctgggaagc 261
Query: 545 cagaaatgggattcatgggtgacttatagcccgttcacaaccactcctaactgta 599
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 260 cagaaatgggattcatgggtgacttatagcccgttcacaaccactcttaactgta 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1001
Length adjustment: 10
Effective length of query: 590
Effective length of database: 991
Effective search space: 584690
Effective search space used: 584690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_a08.g1 MSMg01no511_a08.g1 CHROMAT_FILE:
MSMg01no511_a08.g1 PHD_FILE: MSMg01no511_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:46 2005
(479 letters)
>mm_chr19_60558754_60559632
Length = 879
Score = 926 bits (479), Expect = 0.0
Identities = 479/479 (100%)
Strand = Plus / Plus
Query: 1 cttccacttcaagctcacaagggcttcattgcctcccagaattcccaagaccatggcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttccacttcaagctcacaagggcttcattgcctcccagaattcccaagaccatggcctc 260
Query: 61 tcttgtcccataccccaatttcaatctgcacttgtgtttcagctctctcttgggtcttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttgtcccataccccaatttcaatctgcacttgtgtttcagctctctcttgggtcttat 320
Query: 121 ttgtctggcttaattgcccccaagtgaccattgaaagctggtaatttacccacccattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtctggcttaattgcccccaagtgaccattgaaagctggtaatttacccacccattcc 380
Query: 181 cccatagtattctgcaagtgccagttaaatcacatcaagagaaggagtcttgtcaagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccatagtattctgcaagtgccagttaaatcacatcaagagaaggagtcttgtcaagttc 440
Query: 241 cagaaggagctgcagctgtgagtagcagcatccccataggacataggtttctttcctgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagaaggagctgcagctgtgagtagcagcatccccataggacataggtttctttcctgtc 500
Query: 301 aacagaatgccatcaaaaagaaatttccatgcaggaagatggtaacaatatccttctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagaatgccatcaaaaagaaatttccatgcaggaagatggtaacaatatccttctgct 560
Query: 361 gcagaaatcccacctttgctccctgttttgatttattgaaggcagagcatcagttttaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcagaaatcccacctttgctccctgttttgatttattgaaggcagagcatcagttttaca 620
Query: 421 gggggaaaggactgactctcacaatatctgctcttccttttctactcagtatgaacttc 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggggaaaggactgactctcacaatatctgctcttccttttctactcagtatgaacttc 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
