Query= MSMg01no511_m24.b1 MSMg01no511_m24.b1 CHROMAT_FILE:
MSMg01no511_m24.b1 PHD_FILE: MSMg01no511_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:46 2005
(542 letters)
>mm_chr19_34680916_34681857
Length = 942
Score = 880 bits (455), Expect = 0.0
Identities = 509/527 (96%)
Strand = Plus / Minus
Query: 1 agcaacttgagattgttaatggcataagaggtaagcacacacctgctagacccactgtgt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 672 agcaacttgagattgttaatggcataagaggtaagcacatacctgctagacccactgtgt 613
Query: 61 ttgccttaagcctaaactttggaagcctcaggtagcaaagccacagaaaggatacaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 612 ttgccttaagcctaaactttggaagcctcaggtagcaaagccacagaaaggatacaactt 553
Query: 121 tcattggtctcatttccttcagtggttcagagcacaatgcctgattttggtctagtggga 180
|||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tcattgatctcattttctttagtggttcagagcacaatgcctgattttggtctagtggga 493
Query: 181 cttggaatgctaatgtacaagcccaaggaggatgggcctgcatccttctgcttctttact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 492 cttggaatgctaatgtacaagcccaaggaggatgggcctgcatccttctgcttctttgct 433
Query: 241 ctgatgggtaggaaacggtgggctggacacttaggcattttgtcttgatataagagatgt 300
||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 432 ctgatggataggaaacggtgggctggacacttaggcattgtgccttgatataagagatgt 373
Query: 301 tgttttagcactgcagaaaatctctaagtaacagaagttattaaatcaggcaaatggcac 360
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 372 tgctttagcactgcagaaaatctctaagtaacagaagttgttaaatcaggcaaatggcac 313
Query: 361 actctcaaggttgttccgtctttgaagaatatagggggctatggttgactgattgactga 420
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 actcacaaggttgttccctctttgaagaatatagggggctatggttgactgattgactga 253
Query: 421 tacatcaattgattttctcgctttctgcctctctgttgcttttgctctgctttgtgtgta 480
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 252 tacatcaattgattttcttgctttctgcctctctgtttcttttgctctgctttgtgtgta 193
Query: 481 tacacatgtacatgtgtgtgcgtgcatgcctctgtgtgtgtgtgtgt 527
|||| |||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 192 tacaaatgtacatgtgtgtgcatgcatgcctctgcgtgtgtgtgtgt 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_m24.g1 MSMg01no511_m24.g1 CHROMAT_FILE:
MSMg01no511_m24.g1 PHD_FILE: MSMg01no511_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:46 2005
(534 letters)
>mm_chr19_34519968_34520905
Length = 938
Score = 1009 bits (522), Expect = 0.0
Identities = 533/538 (99%), Gaps = 4/538 (0%)
Strand = Plus / Plus
Query: 1 tctgccaaatacagctatgtgatttggaaccttatcttttgtccagaaaaagcaaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgccaaatacagctatgtgatttggaaccttatcttttgtccagaaaaagcaaatgaa 260
Query: 61 atctgtgtctttgtgactcaaatggccgaagtggtcactttcattttctctatgtcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctgtgtctttgtgactcaaatggccgaagtggtcactttcattttctctatgtcttca 320
Query: 121 ggctgttgtaacaggacacagctgggatgaatcagaggacagcaacatgtctcacccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctgttgtaacaggacacagctgggatgaatcagaggacagcaacatgtctcacccttc 380
Query: 181 tccataagcctccttttcctgt-aactgcttcttaaccactagcatatgcttatgaaact 239
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccataagcctccttttcctgttaactgcttcttaaccactagcatatgcttatgaaact 440
Query: 240 cgcccagaaaatggaattgaataattgggaacagaatttctgagacccgttataacaatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgcccagaaaatggaattgaataattgggaacagaatttctgagacccgttataacaatg 500
Query: 300 tataggcaacaataacctttatctcaatgccaagacataaaaaaaaaa---tcttaactc 356
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 501 tataggcaacaataacctttatctcaatgccaagacataaaaaaaaaaaaatctcaactc 560
Query: 357 tgtgctgaaaatagagattactgctccctttagtgtgggttcagaggtatgtgaggacaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgctgaaaatagagattactgctccctttagtgtgggttcagaggtatgtgaggacaa 620
Query: 417 aagtcctcagtatctaaggattagagaaaaggagagattttcctgtaaagaggaagaaag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtcctcagtatctaaggattagagaaaaggagagattttcctgtaaagaggaagaaag 680
Query: 477 tgttctaaatccataaatatgattacttgtgtgggattggatcctttgatgcatgaag 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttctaaatccataaatatgattacttgtgtgggattggatcctttgatgcatgaag 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 938
Length adjustment: 10
Effective length of query: 524
Effective length of database: 928
Effective search space: 486272
Effective search space used: 486272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
