Query= MSMg01no519_f08.b1 MSMg01no519_f08.b1 CHROMAT_FILE:
MSMg01no519_f08.b1 PHD_FILE: MSMg01no519_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:01 2005
(449 letters)
>mm_chr19_27354240_27355087
Length = 848
Score = 762 bits (394), Expect = 0.0
Identities = 436/450 (96%), Gaps = 3/450 (0%)
Strand = Plus / Minus
Query: 1 tagtacactagggtgttgagagtgaacaatatatggattaactctgaaaggtgtgtgggc 60
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 487 tagtacact-gggtgttgagagtgaacaatatgtggattaactctgaaaggtgtgtgggc 429
Query: 61 tgcagtgagagatatgcaccagtccagagagttgtgtgtgccgcagtgacagagatgtag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 428 tgcagtgagagatatgcaccagtccagagagttgtgtgtgctgcagtgacagagatgtag 369
Query: 121 gttaacacggagaggtgtgtggactacagtgacagagatgagggttaaccctgaaaggtg 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gttaacatggagaggtgtgtggactacagtgacagagatgagggttaaccctgaaaggtg 309
Query: 181 tgcgagctgcagtgacagatgtgggttaaccctgctaggtgggtgggctgcagtgacaga 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttcgagctgcagtgacagatgtgggttaaccctgctaggtgggtgggctgcagtgacaga 249
Query: 241 tgagggttaaccctgacaggtgtgtgggccgcagagacagatgagggttgtagtggctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tgagggttaaccctgacaggtgtgtgggccgcagagacagatgagggttgtagtggctat 189
Query: 301 ttctggttgtcaacttgactatatctggaatgaactacaatccagaattggaaggctcac 360
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttctggttctcaatttgactatatctggaatgaactacaatccagaattggaaggctcac 129
Query: 361 cagtgatcctaatctggagtctgggggat-gcaagtttctgacctggatcttggtatgga 419
||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||||
Sbjct: 128 cagtgatcctaatctggagtctgggagatag-aagtttctgacctggatcttggcatgga 70
Query: 420 gatcttgaggcatagtggctatggattcca 449
||||||| |||| |||||||||| ||||||
Sbjct: 69 gatcttgtggcaaagtggctatgaattcca 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 848
Length adjustment: 10
Effective length of query: 439
Effective length of database: 838
Effective search space: 367882
Effective search space used: 367882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_f08.g1 MSMg01no519_f08.g1 CHROMAT_FILE:
MSMg01no519_f08.g1 PHD_FILE: MSMg01no519_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:01 2005
(323 letters)
>mm_chr19_27213737_27214459
Length = 723
Score = 609 bits (315), Expect = e-179
Identities = 321/323 (99%)
Strand = Plus / Plus
Query: 1 tttatatagaccagcctggccttgaactcttagagatccacctgcctttgctccctaggt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tttatatagaccagcctggccttgaactcttagagatccacctgcctttgcttcctaggt 260
Query: 61 gttgcagttaagggtgtgtgacaccatgcaccaagctaagaggctgagataatctgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgcagttaagggtgtgtgacaccatgcaccaagctaagaggctgagataatctgtaga 320
Query: 121 gatttttaaggacatatgacgttttccagctcacctgggaacaactcttcctgtcaccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttttaaggacatatgacgttttccagctcacctgggaacaactcttcctgtcaccca 380
Query: 181 tgaacacaaatttgaaattagcaggtccaattctgtgtgtgccacagaaaacttcataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaacacaaatttgaaattagcaggtccaattctgtgtgtgccacagaaaacttcataaa 440
Query: 241 gatgaaccacaattcatatatccaaagtgtgactatttgcaccattataaccctgatgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgaaccacaattcatatatccaaagtgtgactatttgcaccattataaccctgatgtg 500
Query: 301 actggctacagagcctgctagaa 323
|||||||||||||| ||||||||
Sbjct: 501 actggctacagagcatgctagaa 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
