Query= MSMg01no519_n04.b1 MSMg01no519_n04.b1 CHROMAT_FILE:
MSMg01no519_n04.b1 PHD_FILE: MSMg01no519_n04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:39 2005
(438 letters)
>mm_chr11_3055744_3056581
Length = 838
Score = 219 bits (113), Expect = 4e-61
Identities = 127/132 (96%), Gaps = 2/132 (1%)
Strand = Plus / Minus
Query: 308 taggcngttctcttcaatagtttgttgagcaggggcaacaattctcttcattggttttat 367
||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 taggcagttcccttcaatggtttgttgagcaggggcaacaattctcttcattggttttat 579
Query: 368 ttctgagtgtagattcttttt-aaatgattaagcacatgatctacatactatgtagcctc 426
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttctgagtgtagatt-tttttaaaatgattaagcacatgatctacatactatgtagcctc 520
Query: 427 aacattcattag 438
||||||||||||
Sbjct: 519 aacattcattag 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_n04.g1 MSMg01no519_n04.g1 CHROMAT_FILE:
MSMg01no519_n04.g1 PHD_FILE: MSMg01no519_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:39 2005
(642 letters)
>mm_chr19_10652425_10653466
Length = 1042
Score = 1234 bits (638), Expect = 0.0
Identities = 641/642 (99%)
Strand = Plus / Plus
Query: 1 ttagtgtccctccgtctttgaggaggaaacaactaactctgccctttggtctttttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagtgtccctccgtctttgaggaggaaacaactaactctgccctttggtctttttgttt 260
Query: 61 gtagctctaacttctaaaagtaactgtgtttggagtacagccttttcctgagagtaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagctctaacttctaaaagtaactgtgtttggagtacagccttttcctgagagtaatgg 320
Query: 121 aaggttcatttcttaacccagggactgattctgttttagctcagcctatgagaatccttt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggttcacttcttaacccagggactgattctgttttagctcagcctatgagaatccttt 380
Query: 181 agccagtgaattgaggaaaacattaaatagaggttcggtacacttcttaaatcaaggtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccagtgaattgaggaaaacattaaatagaggttcggtacacttcttaaatcaaggtag 440
Query: 241 ataaactacaccccatacatctaaccctgagtggcttttacatatttaaactattggggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaactacaccccatacatctaaccctgagtggcttttacatatttaaactattggggc 500
Query: 301 agagggatcatattgtgtgaaatgtgaaaatcatgtaaaacttagacatcagtgtctgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagggatcatattgtgtgaaatgtgaaaatcatgtaaaacttagacatcagtgtctgtg 560
Query: 361 gtgttaacgaggcacagccatgctcatttgttgagatacccttcctggctactcttatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgttaacgaggcacagccatgctcatttgttgagatacccttcctggctactcttatat 620
Query: 421 tacaccagccaagaatgaatatagttgtgacagaggcttcaagcccaaacagcctaaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacaccagccaagaatgaatatagttgtgacagaggcttcaagcccaaacagcctaaaga 680
Query: 481 gtctgtggactccctccttgagcatggggctcagccaagcaaggacaggagacccggcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtctgtggactccctccttgagcatggggctcagccaagcaaggacaggagacccggcag 740
Query: 541 tggtgagcatgtctggtgtcttagtacaaactgctctctcagtgcaagtgagagcgtagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggtgagcatgtctggtgtcttagtacaaactgctctctcagtgcaagtgagagcgtagt 800
Query: 601 ctcagcctttgcctgcgttcttttccttgcttttgctatttt 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctcagcctttgcctgcgttcttttccttgcttttgctatttt 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
