Query= MSMg01no521_p10.b1 MSMg01no521_p10.b1 CHROMAT_FILE:
MSMg01no521_p10.b1 PHD_FILE: MSMg01no521_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:27 2005
(258 letters)
>mm_chr19_45636135_45636792
Length = 658
Score = 451 bits (233), Expect = e-131
Identities = 248/253 (98%)
Strand = Plus / Plus
Query: 1 tgccaaattctgtgctagagcagatagaaaaaacagacaatagcaaagtcaaaacaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tgccaaattctgtgctagagcagatagaaaaaacagacaatagcaaagttaaaacaaaca 260
Query: 61 agaagacgacaaccatggcttatgctttcctgggatcataaaattatcaagaaaaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaagacgacaaccatggcttatgctttcctgggatcataaaattatcaagaaaaaaata 320
Query: 121 tgtaaggaaatagcagcttgtgttaaatagaggttgggatcttagaaaggcaaggatagc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtaaggaaatagcagcttgtattaaatagaggttgggatcttagaaaggcaaggatagc 380
Query: 181 cccatgcctgccatctctgcactcaggaggtcaaggcaggagactttggaaggaaggaag 240
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 381 cccatgcctgccatctctgcactcaggaggtcaaggcaggagactcaggaaggaatgaag 440
Query: 241 gaaggaaggaagg 253
|||||||||||||
Sbjct: 441 gaaggaaggaagg 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no521_p10.g1 MSMg01no521_p10.g1 CHROMAT_FILE:
MSMg01no521_p10.g1 PHD_FILE: MSMg01no521_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:27 2005
(530 letters)
>mm_chr19_45802031_45802957
Length = 927
Score = 814 bits (421), Expect = 0.0
Identities = 451/465 (96%), Gaps = 8/465 (1%)
Strand = Plus / Minus
Query: 66 aatgctgcaaccctttacagttcctcatgctgtggtgaccaccagccataaaattatttt 125
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 927 aatgctgcaaccctttacagttcctcgtgctgtggtgaccaccagccataaaattatttt 868
Query: 126 gttgctcctgtagctgtgattttgctagtgttatggattgtaatgtaaatacctgacctg 185
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 867 gttgctcctgtagctgtgattttgctagtgttatggattgtaatgtaaat-----acctg 813
Query: 186 atatgcagaatatttgatatatgacccctatgaaaaagtcgtttgaccgccaaaggcctt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 atatgcagaatatttgatatatgacccctatgaaaaagtcgtttgaccgccaaaggcctt 753
Query: 246 gcaaaccaaaggttgagaacagctggcccgagagataggcctgcgagaccaggggatgga 305
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 752 gcaaaccaaaggttgagaacagctggcccgagagataggcctgcgagaccacgggatgga 693
Query: 306 actatcctggatccgattagaacggtcagcatcaacgtttgtgtgagtaggggagtccag 365
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 692 actatcctggatccgattagaatggtcagcatcaacgtttgtgtgagtaggggagtccag 633
Query: 366 cgggtgctttagaatgtcactctttggaccagtggcttctgtgggcagggactctggggg 425
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 632 cgggtgctttagaatgtcactctttggaccagtggcttctgtgggcagggactctgtggg 573
Query: 426 aggagctgggccacctgagtaagggctctgaggtcaggcatgcagattgacaccatcact 485
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 572 aggagctgggccacctgagtaagggctctgaggtcaggcgtgcagattgacaccatcact 513
Query: 486 ggtaccgtaagaagaagatgcactgagcctctatggaggctgctt 530
|||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 512 ggtaccgt---aagaagatgcactgggcctctatggaggctgctt 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 927
Length adjustment: 10
Effective length of query: 520
Effective length of database: 917
Effective search space: 476840
Effective search space used: 476840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
