NNNNTTTTTCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACTTTCTTTCTTTCTTTCTTTCTTCACTAGAGTGGTTT
TATACATAATGAACCTCTCCAAGCTGTCAGTACTTGTTTAATGAATAGAT
CTCATATTTGCTCAAAGCATTGCCTTGGGGAACTATGTGGCAATGGAAGA
TTTTGCTCTATCAAGTAATTTATTTAAAATCCTTTGGGTTAGGTGGTAGG
AGAGTTTTGTTAGCCTATTTTATGTCCATTGTAAAGCATAACAAGCTGTC
TAGAGAACTAACCTAAACATAACTTTTAAGAATCAAGAAGAAACAGGAAA
TTGGGAAATCAATGTTATAAATTATATTTATAAAAAGAGACGCAAATCCT
CCCTTTTAAAAAAATATTTTATTTTATGTATGTGAGTACACTGTTACTCT
CCTCAGACACTTCAGAAGAGAGGATCAGATCCCATTACAGATGGTTATGA
GCTACAATGCAGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGTACT
CAGTGCTCTTAACTACAGAAGCATCTCTCCATTCTAAATTCTCAGTTCTG
TTCCTTGTAAGTAGTGTAGCTATATTTAGATATGAAATGTTTACATATGC
AGTGGCATATTTTCTACTTGGGAAACTGAAACTTGCAGGCAAAATACTAG
TAGATTTGCTAGAAGATCATAGAAAGCCCCNGAAACACAAAGAAGACCTG
T

CGAAAAAACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTTGTAGACAAGGCT
GGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATT
AAGGGCATGTGCCACCACCACCGGGCTTCTTTACATTTCTTAAGACAAGA
AATATGTGTTCCTCCAACCATAAATTGTTGGTAACCTTGTAGCTATATAA
ATGAAGATTTTCCAAAGGGATTGACCAAAGAAGTCACCTGTAATTGTGAC
CAATCACAAATTTTCTTTGCTTTCTTCCCAGGTTCATTTGAATAAATCCT
TCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCNCCCCTCCCCNCCCC
NCCCCNCNCNNNNNNCNCNNNNCNNCNNCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCNCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCNCCCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCCNC
CCCCNCCCCNCCCCCCCCCCNCCCCCCCCCCCCCCCCCCCNNCCCCCCCC
CNCCCCCCCNCTTCCCCCCCCCCCCCNCCCCNCCCCCCCCCCCCCCCCCC
CCCTCCCCCCCCCCCCNNCTCTTTTTTTTTCTTTTCTTTTCTTTTTTTTT
TTTCTTTCTTTTTTTTTTTTCTTTCTTCTCTTTTTTTTTCCCTTCCTTTT
TT

Query= MSMg01no522_b10.b1 MSMg01no522_b10.b1 CHROMAT_FILE:
MSMg01no522_b10.b1 PHD_FILE: MSMg01no522_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:36 2005
         (622 letters)



>mm_chr19_49795004_49796025
          Length = 1022

 Score = 1166 bits (603), Expect = 0.0
 Identities = 609/611 (99%)
 Strand = Plus / Plus

                                                                       
Query: 12  ctttctttctttctttctttcttcactagagtggttttatacataatgaacctctccaag 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ctttctttctttctttctttcttcactagagtggttttatacataatgaacctctccaag 271

                                                                       
Query: 72  ctgtcagtacttgtttaatgaatagatctcatatttgctcaaagcattgccttggggaac 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctgtcagtacttgtttaatgaatagatctcatatttgctcaaagcattgccttggggaac 331

                                                                       
Query: 132 tatgtggcaatggaagattttgctctatcaagtaatttatttaaaatcctttgggttagg 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tatgtggcaatggaagattttgctctatcaagtaatttatttaaaatcctttgggttagg 391

                                                                       
Query: 192 tggtaggagagttttgttagcctattttatgtccattgtaaagcataacaagctgtctag 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tggtaggagagttttgttagcctattttatgtccattgtaaagcataacaagctgtctag 451

                                                                       
Query: 252 agaactaacctaaacataacttttaagaatcaagaagaaacaggaaattgggaaatcaat 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agaactaacctaaacataacttttaagaatcaagaagaaacaggaaattgggaaatcaat 511

                                                                       
Query: 312 gttataaattatatttataaaaagagacgcaaatcctcccttttaaaaaaatattttatt 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gttataaattatatttataaaaagagacgcaaatcctcccttttaaaaaaatattttatt 571

                                                                       
Query: 372 ttatgtatgtgagtacactgttactctcctcagacacttcagaagagaggatcagatccc 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ttatgtatgtgagtacactgttactctcctcagacacttcagaagagaggatcagatccc 631

                                                                       
Query: 432 attacagatggttatgagctacaatgcagttgctgggatttgaactcaggacctctggaa 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 attacagatggttatgagctacaatgcagttgctgggatttgaactcaggacctctggaa 691

                                                                       
Query: 492 gagtactcagtgctcttaactacagaagcatctctccattctaaattctcagttctgttc 551
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 692 gagtactcagtgctcttaactaccgaagcatctctccattctaaattctcagttctgttc 751

                                                                       
Query: 552 cttgtaagtagtgtagctatatttagatatgaaatgtttacatatgcagtggcatatttt 611
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 752 cttgtaagtagtgtagctatatttatatatgaaatgtttacatatgcagtggcatatttt 811

                      
Query: 612 ctacttgggaa 622
           |||||||||||
Sbjct: 812 ctacttgggaa 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)