NNNNTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACTTCCCAGTTATATTTCCTCTCCAAATTAGTATTTCT
ATCTCCAGAAGTAATTTTATCTAAACGTTCAGAGCCTTCGGCTTGCCATT
AAATGGCATCATGCTTGGGAAATGCTTAGCTGTTTCTAAGCACAATTTAC
ATCTCTTATCCAGTCAGGTTCAAAGCAGCAGTTATGTTGGTCTTTCCAGT
TCAAGAGGCAGAACAGAGTCCTCAGTTTGATCTCAATGGTTGCCCCCTTG
TCCCAATGCATGTCCCCTTACTCTGCAGGGAAGACTAACATCTTCCCAGG
TGCCCAGACACATGGCTCAGGAGAATGTTTTTATTTCCTACCCCACCCCA
CTCTTTATTGAAAATAGGGTTTTTTCTCACATAATATGTCCTGACTAGTT
CCCCTCGCTCTACTGCTCCCAGCTCCTCCCCTCCCATCTCCCATACATAT
CCACCCTCTTTCTGTCTCTCACTAGAAAACAAATGCTTCTATGGGATAAT
AATAAAATATAGTAAAATAAAACAAAACTAACACATTGGAATTGAACAAA
ACAAATGGAAGGAGAAGAGCCTAACAAAAGACAGATGAAACCAAGACTCA
CTCATACGCACACTCAGAGATCCTATAAAAATACTAAACTGGAAGCCATA
ATATACACAAAGACTTCTAGGAAAAAATGACATTTATATCATATGCACAC
ATTGTATATAGTAAA

NNTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGCATCAAGTCACCATTGT
GGATAAGAATGGTTTTTTATTTAGTCTCTGAGCACTTTCTCCTGTACCTT
AAACTTAGATGTTGTTTCTATGTTTTTTTGCCCCTCTCTGACCACATGGT
TTTGTTGTGTTTTGCTTTTGCCTTTGTTTTTTTAACATCTTAACAAGAAC
ATTGCTGAATTCTTTAGTCACTGTGGTCAATACCAGTTGACATAACTCAA
TAAAATTGTTCAAGGATCCTTAATAGTTTTGAGTGTATTAGTCTACAAAA
ACATTGCTTTTCAACATGAGCAGTTACTGATGAGGAATGGAAACAAAACA
TCCACATTAAAAAAAAACCCTTTACAATATGTATTTATTTATGTGTGTAT
GTACACGCCACAGTATGTGAGTGGCAGTCAGAAACAACTTGTGGGTTCCT
CTCCATGTGAGTCTGGGGCACTGAATTCAGGTTGCCAGGCATGGAGGCAT
GTCCTTTACCTGCTGAACTATCAATATAGCCATGAGAATACTTTCTGGTT
TTCAATGAAAAACTTTCATATAATATACTTTGATTAATTTCCCCTTCTCC
AGTTCTTCCCGTCTCCCACTTCTGTCCCCATTCAATTTCTTGGNCTTTTA
CTCCTTCTCTCTAAAATATCCAGAAAGCAAAACAAACAACTGAAACCAAA
AACTTTCC

Query= MSMg01no522_h10.b1 MSMg01no522_h10.b1 CHROMAT_FILE:
MSMg01no522_h10.b1 PHD_FILE: MSMg01no522_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:04 2005
         (654 letters)



>mm_chr19_18999646_19000699
          Length = 1054

 Score = 1027 bits (531), Expect = 0.0
 Identities = 546/551 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacttcccagttatatttcctctccaaattagtatttctatctccagaagtaatt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaattcacttcccagttatatttcctctccaaattagtatttctatctccagaagtaatt 492

                                                                       
Query: 65  ttatctaaacgttcagagccttcggcttgccattaaatggcatcatgcttgggaaatgct 124
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 491 ttatctaaacgttcagagccttcggcttgccattaaatggcatcattcttgggaaatgct 432

                                                                       
Query: 125 tagctgtttctaagcacaatttacatctcttatccagtcaggttcaaagcagcagttatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tagctgtttctaagcacaatttacatctcttatccagtcaggttcaaagcagcagttatg 372

                                                                       
Query: 185 ttggtctttccagttcaagaggcagaacagagtcctcagtttgatctcaatggttgcccc 244
           |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 371 ttggtctttccagttcaaaaggcagaacagagtcctcagtttgatctcaatggctgcccc 312

                                                                       
Query: 245 cttgtcccaatgcatgtccccttactctgcagggaagactaacatcttcccaggtgccca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttgtcccaatgcatgtccccttactctgcagggaagactaacatcttcccaggtgccca 252

                                                                       
Query: 305 gacacatggctcaggagaatgtttttatttcctaccccaccccactctttattgaaaata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gacacatggctcaggagaatgtttttatttcctaccccaccccactctttattgaaaata 192

                                                                       
Query: 365 gggttttttctcacataatatgtcctgactagttcccctcgctctactgctcccagctcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gggttttttctcacataatatgtcctgactagttcccctcgctctactgctcccagctcc 132

                                                                       
Query: 425 tcccctcccatctcccatacatatccaccctctttctgtctctcactagaaaacaaatgc 484
           |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 131 tcccctcccatctctcatacatatccaccccctttctgtctctcactagaaaacaaatgc 72

                                                                       
Query: 485 ttctatgggataataataaaatatagtaaaataaaacaaaactaacacattggaattgaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  ttctatgggataataataaaatatagtaaaataaaacaaaactaacacattggaattgaa 12

                      
Query: 545 caaaacaaatg 555
           |||||||||||
Sbjct: 11  caaaacaaatg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)