NAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGTTTAGTTCTGAGCCCCCCCTTTTTAAATGGGGTTATT
TGATTTTCTGGAATCTACCTTCTTGAGTTCTTTATATATATTGGATATTA
GTACCCTATCTGATTTAGGATAATTAAAGATCCTTTCCCAATCTGTTGGT
GACCTTTTTGTCTTATTGACAGTTTCTTTTGCCTTACAGAAGCTTTGCAA
TTTTATGAGGTCCCATTTGTAAATTCTCAAACTTACAGCACAAGCCATTC
CTGTTCTATTCAGGAATTTTTCCCCTGTGCCCTTATCTTCAAGGCTTTTT
CCCACTTTCTCCTCTATAAGTTTCACTGTCTCTGGTTTTATGTGGAGTTC
CTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATATGAATGGATCAA
TTCACATTCTTCTACATGATAACCACCAGTTTTGCCAGCACCATTTGTTG
AAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGAT
CAAGTGACCATAGGTGTGTGGGTTCATCTCTGGGTCTTCAATTCTGTTCC
ATTGGTCTACATGTCTGTCACCATACCAGTACCATGCAGNTTTTATCACA
ATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGT
TCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTATTCC

NCACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTAAGGAACTAAGCAGAGACA
TGAAAGAATTATACTTACTGACTTGCTTCCCTTGGCTTATTCAGCTGCTT
TCTTAAAGAAACAAGGGCAATCTGCATAGAGATGGTACTGCCTACAGTAG
GCTGGACATATAAATGATCAACTACGGAAATACCCTAAAGACACGCCAAC
TGGCCAACCCAATAACAACAATTTCTTAGCAGAGGTTTCGTCTATCAATG
TGTGTCAAGTTGACAGCCAATATTAGCCATCCCAGAGAAGAATGCATTTT
TAAAACTAGTTATTAGTTATTATTAGTTATAACTAGTATCTAGTTATTAT
TTTTAATTAGAAAAAAAATAAGCCCAAATGTCTAGTTATATCTTGCTCAA
TCACATTGGTAATGTCAAAGATAAAAGGGAGTTAGAACAGTATTAGAAAA
GTTGCCAGAGGGTGAAATATTTGGAAAACTGAAAATCACTTTATCTTTGT
CCTTTTCTAAAAGTAATTTTTCTCCCTCGGGAAAACTGTTTGTTGTTGTT
TTCTGTCCTGTCACAAAGTGGTTTCTGTGCACTCTGCAATCCCCAATAAT
ACCAGCAGTGTGGTCGCCAAGGGGCATGACTGTGATTCCATCTGTGTCTA
ATTTCTTCACCAGCCAATTGTTGATATGTAGAGGGCCTGAGTTTTAATAA
CAC

Query= MSMg01no522_m03.g1 MSMg01no522_m03.g1 CHROMAT_FILE:
MSMg01no522_m03.g1 PHD_FILE: MSMg01no522_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:27 2005
         (590 letters)



>mm_chr19_20264561_20265550
          Length = 990

 Score = 1118 bits (578), Expect = 0.0
 Identities = 587/590 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtaaggaactaagcagagacatgaaagaattatacttactgacttgcttcccttggct 60
           |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 201 aggtaaggaactaagcagagacatgaaagaatgatgcttactgacttgcttcccttggct 260

                                                                       
Query: 61  tattcagctgctttcttaaagaaacaagggcaatctgcatagagatggtactgcctacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattcagctgctttcttaaagaaacaagggcaatctgcatagagatggtactgcctacag 320

                                                                       
Query: 121 taggctggacatataaatgatcaactacggaaataccctaaagacacgccaactggccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggctggacatataaatgatcaactacggaaataccctaaagacacgccaactggccaa 380

                                                                       
Query: 181 cccaataacaacaatttcttagcagaggtttcgtctatcaatgtgtgtcaagttgacagc 240
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaataacaacaattccttagcagaggtttcgtctatcaatgtgtgtcaagttgacagc 440

                                                                       
Query: 241 caatattagccatcccagagaagaatgcatttttaaaactagttattagttattattagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatattagccatcccagagaagaatgcatttttaaaactagttattagttattattagt 500

                                                                       
Query: 301 tataactagtatctagttattatttttaattagaaaaaaaataagcccaaatgtctagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataactagtatctagttattatttttaattagaaaaaaaataagcccaaatgtctagtt 560

                                                                       
Query: 361 atatcttgctcaatcacattggtaatgtcaaagataaaagggagttagaacagtattaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatcttgctcaatcacattggtaatgtcaaagataaaagggagttagaacagtattaga 620

                                                                       
Query: 421 aaagttgccagagggtgaaatatttggaaaactgaaaatcactttatctttgtccttttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagttgccagagggtgaaatatttggaaaactgaaaatcactttatctttgtccttttc 680

                                                                       
Query: 481 taaaagtaatttttctccctcgggaaaactgtttgttgttgttttctgtcctgtcacaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taaaagtaatttttctccctcgggaaaactgtttgttgttgttttctgtcctgtcacaaa 740

                                                             
Query: 541 gtggtttctgtgcactctgcaatccccaataataccagcagtgtggtcgc 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtggtttctgtgcactctgcaatccccaataataccagcagtgtggtcgc 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)