Query= MSMg01no525_a07.b1 MSMg01no525_a07.b1 CHROMAT_FILE:
MSMg01no525_a07.b1 PHD_FILE: MSMg01no525_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:28 2005
(605 letters)
>mm_chr19_23306295_23307299
Length = 1005
Score = 1096 bits (567), Expect = 0.0
Identities = 594/603 (98%), Gaps = 2/603 (0%)
Strand = Plus / Plus
Query: 4 ggaattcataaact-tctaataaaaagtataatatatgcttcaaaggactaaagaattaa 62
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcataaa-tatctaataaaaagtataatatatgcttcaaaggactaaagaattaa 262
Query: 63 gaccaaaacccaggcgaattctagtagagcaatatccctgactcaacacaagctatccaa 122
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 gaccaaaacccaggcgaattctagtagagcaatatccccgactcaacacaagctatccaa 322
Query: 123 cacctctaagtgtggctaatgcagcctaggtaaatgtttgggaaggcatactttcagagg 182
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 323 cacctctaagtgtggctaatgcaccctagggaaatgtttgggaaggcatactttcagagt 382
Query: 183 gatgagaaagctcactaaacagtgaaaaggctgcgcttttgctttgctgacatctctccc 242
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 383 gatgagaaagctcactaaacagtgaaaaggctgcgatttcgctttgctgacatctctccc 442
Query: 243 aaggacctgtagtttggtagtttttcctaagagacactaagagcccagtgcccaatggtt 302
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaggacatgtagtttggtagtttttcctaagagacactaagagcccagtgcccaatggtt 502
Query: 303 tacgctttcctccccttcactgcactggttaaaggaacataatctcagacttcctttttc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tacgctttcctccccttcactgcactggttaaaggaacataatctcagacttcctttttc 562
Query: 363 catgttgacaatactagatgaaaatacttttcatagagttcaaagagtttttattttgac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 catgttgacaatactagatgaaaatacttttcatagagttcaaagagtttttattttgac 622
Query: 423 ctttgttctttaatcatttttcttcatttacacaagagtttcacaaatcaaaacattcta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctttgttctttaatcatttttcttcatttacacaagagtttcacaaatcaaaacattcta 682
Query: 483 agcaccataatatcattacatctgatttttctactatcaataataggttgttgtgattcc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agcaccataatatcattacatctgatttttctactatcaataataggttgttgtgattcc 742
Query: 543 caccctacccccggtctcggaagcttcacgaccaacactgttaaggtttgtcttactaga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 caccctacccccggtctcggaagcttcacgaccaacactgttaaggtttgtcttactaga 802
Query: 603 gaa 605
|||
Sbjct: 803 gaa 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_a07.g1 MSMg01no525_a07.g1 CHROMAT_FILE:
MSMg01no525_a07.g1 PHD_FILE: MSMg01no525_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:28 2005
(519 letters)
>mm_chr19_23337699_23338617
Length = 919
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Minus
Query: 196 agtaactgacatggccaattgtggaataacaaacaaaaagccaatgtttccaaggtggga 255
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 719 agtaactgacatggccaattgtgggataacaaacaaaaagccaatgtttccaaggtggga 660
Query: 256 aggattcaaaaataccagaaagaataaaaattatagtactatttcttagactttgggtat 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aggattcaaaaataccagaaagaataaaaattatagtactatttcttagactttgggtat 600
Query: 316 aggaaaagtaacagaaatgttattctttactctttaattaggttcaggacttctggaaat 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aggaaaagtaacagaaatgttattctttactctttaattaggttcaggacttctggaaat 540
Query: 376 cttataatcacccgtgagattgatgtgataaaaaatcagtccttttggttcatcaacaaa 435
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cttataatcacccgcgagattgatgtgataaaaaatcagtccttttggttcatcaacaaa 480
Query: 436 aagcctgtaacccagaagatagtggaagaacaggttgcagccttaaacatccaagtgggc 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aagcctgtaacccagaagatagtggaagaacaggttgcagccttaaacatccaagtgggc 420
Query: 496 aatctgtgccagttcttgcctcag 519
||||||||||||||||||||||||
Sbjct: 419 aatctgtgccagttcttgcctcag 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
