XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATC
TGAAATTTTTCCATATGTTTCTTTCTTTGATTATGGAGAGTAGATTGCAC
TAGGAAATATCTTTCATCACAAAAAAAAATGTAACCAAAATGTAAAGGAT
CAGTGTTCCTTGGGAAGAAACATATCTGACCCTTTGAATCAATGTGTTTG
GTGGGTTATGATATATTTTTGCTCCACCAGTTCCTTGCAGCAGCAGGGAA
AAAGGAACAGACAGCATTTCTCATGTTCAGAACCTCAGAATGCTCTTAAA
TGCAGAAAACCAAGAGTGTTACTTTTGAAAAATGAAAATATTTGAGGGAT
ATGATGTCGGGGTTACCTATTCCCAGATTTTCCATTAAAATGGGTATATA
TTGTTATTGATTTGGCTTAAAGATAAATGCAGCATTCAACTTACTGTATG
CCCAACAATTAGTAGTTGAGTATTTACTCTGATGGAGGAGACGATGCCAT
GGAAGATGGGGAAGACAGTACCTTAAATATACTAGATGTAAAAGCATAAG
TACTCAGAAGGTTCATCCTGTTTAATCTTCAAAACTGGTGTAAGGGATAA
TAGTGACACACTAACCAGTGTCCCCACTGTCCATAGAAGAAGGTCCGTTA
TCTGCTTTAGGTTACACAACCAGCATGCACCATAGCCCAGCACCCACACT
CCTACATCTGCATATGTTCTACGTTACACCAAAGCCTTCCCCTTCTCCGT
TG

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCTGTTTAGCTCTGTATCCAATTCATAAATTGGGT
TACTTGGGGTTTTGGAGGTTAACTTCTTGAGTTCTTTATATATTTTGGAT
ATTAGCCATCTATCAGATGTAGGGTTAGTGATGATTTTTCCCAATTTGTA
GGTTGCAGATTTGTCCTACTGATGGTATCTTTTGCCTTACAGAAGCTTTT
CAGTTTCATGAGATCCCATGTATCAATTTTTGATCACAGAGCCTGAGTCA
TTGTTGTTCTGTTCAGGAAATTTCCCCCAGTGCCATTGAGTTCAAGGCTC
TTTCTCATTAGACAACAAAAAGTATCACAGGGATACAAATTGGAAAGGAA
GAAGTCAAAGTATCACCATTTGCAGATGATATGGTAGTATACATAAGTAA
CCCCCAAATTCCACTTGAGAACTACTACAGCTGATAAACAACTTCAGCAA
AATAGCAGGATCTAAAATTAACTCAAACAAATCGTAGCCTTTCTTATATA
AACGATAAACAGGCTGAGAAAGAAATTGGGGAAACAAAACCCTTCACAAT
AGCCACCCATAGTAGAAAATATCTTGGTGTAACTCTTACCAAACAAGTGA
AAGATGTGTATGACAAGAACTTCAAATCCCTGAAAAAAGAAATTGAATTG
TGTCTGTCTCATTTCAATGTCTTCCAGTTGCATTCATGCAAN

Query= MSMg01no526_o22.b1 MSMg01no526_o22.b1 CHROMAT_FILE:
MSMg01no526_o22.b1 PHD_FILE: MSMg01no526_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:00 2005
         (668 letters)



>mm_chr19_31783678_31784747
          Length = 1070

 Score = 1203 bits (622), Expect = 0.0
 Identities = 655/666 (98%), Gaps = 2/666 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatctgaaatttttccatatgtttctttctttgattatggagagtagattgcac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatctgaaatttttccatatgtttctttctttgattatggagagtagattgcac 264

                                                                       
Query: 65  taggaaatatctttcatcacaaaaaaaaa-tgtaaccaaaatgtaaaggatcagtgttcc 123
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 265 taggaaatatctttcatcacaaaaaaaaaatgtaaccaaaatgtaaaggatcagtggtcc 324

                                                                       
Query: 124 ttgggaagaaacatatctgaccctttgaatcaatgtgtttggtgggttatgatatatttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgggaagaaacatatctgaccctttgaatcaatgtgtttggtgggttatgatatatttt 384

                                                                       
Query: 184 tgctccaccagttccttgcagcagcagggaaaaaggaacagacagcatttctcatgttca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgctccaccagttccttgcagcagcagggaaaaaggaacagacagcatttctcatgttca 444

                                                                       
Query: 244 gaacctcagaatgctcttaaatgcagaaaaccaagagtgttactttt-gaaaaatgaaaa 302
           |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 445 gaacctcagaatgctcttaaatgcagaaaaccaagagtgttaatttttgaaaaatgaaaa 504

                                                                       
Query: 303 tatttgagggatatgatgtcggggttacctattcccagattttccattaaaatgggtata 362
           |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 tatttgagggatatgatgtcagggtaacctattcccagattttccattaaaatgggtata 564

                                                                       
Query: 363 tattgttattgatttggcttaaagataaatgcagcattcaacttactgtatgcccaacaa 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tattgttattgatttggcttaaagataaatgcagcattcaacttactgtatgcccaacaa 624

                                                                       
Query: 423 ttagtagttgagtatttactctgatggaggagacgatgccatggaagatggggaagacag 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttagtagttgagtatttactctgatggaggagacgatgccatggaagatggggaagacag 684

                                                                       
Query: 483 taccttaaatatactagatgtaaaagcataagtactcagaaggttcatcctgtttaatct 542
           | ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 685 tgccttaaatatactagatgtaaaagcttaactactcagaaggttcatcctgtttaatct 744

                                                                       
Query: 543 tcaaaactggtgtaagggataatagtgacacactaaccagtgtccccactgtccatagaa 602
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcaaaactggtgtaggggataatagtgacacactaaccagtgtccccactgtccatagaa 804

                                                                       
Query: 603 gaaggtccgttatctgctttaggttacacaaccagcatgcaccatagcccagcacccaca 662
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaaggtccgttatctgcttcaggttacacaaccagcatgcaccatagcccagcacccaca 864

                 
Query: 663 ctccta 668
           ||||||
Sbjct: 865 ctccta 870


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1070
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1060
Effective search space:   697480
Effective search space used:   697480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)