Query= MSMg01no532_g17.b1 MSMg01no532_g17.b1 CHROMAT_FILE:
MSMg01no532_g17.b1 PHD_FILE: MSMg01no532_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:20 2005
(663 letters)
>mm_chr19_58340942_58342004
Length = 1063
Score = 1212 bits (627), Expect = 0.0
Identities = 642/647 (99%)
Strand = Plus / Minus
Query: 17 taatgcacacccagtatgctctatttatgaagattaatgacattttcaagacaatgcaag 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 taatgcacacccagtatgctctatttatgaagattaatgacattttcaagacaatgcaag 1004
Query: 77 ggatttggcatctcatagattctaagttaattctcgccttctccacaaaatccataccat 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 ggatttggcatctcatagattctaagttaattctcgccttctccacaaaatccataccat 944
Query: 137 tgtgcaggaaaagaaataccctaaatacagcccaaggagtttgcttataattttttaagt 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 tgtgcaggaaaagaaataccctaaatacagcccaaggagtttgcttataattttttaagt 884
Query: 197 aaatgtataaattattttatgtgctcaagataaattgccaagaaacgcaccgcttaacat 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 aaatgtataaattattttatgtgctcaagataaattgccaagaaacgcaccgcttaacat 824
Query: 257 aattccctgcccagcaaccatggcgtttgtgactagctgtgacatttctactgtcagagc 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 aattccctgcccagcaaccatggcgtttgtgactagctgtgacatttctactgtcagagc 764
Query: 317 aatgtttgtttccttttttaggtcatagaagtgtccgtgtcaacataggagggcaacatg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aatgtttgtttccttttttaggtcatagaagtgtccgtgtcaacataggagggcaacatg 704
Query: 377 ccttgtctttttctcttttaggcacagtcatgactcctaactacatagactccagcagcc 436
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ccttgtctttttctcttccaggcacagtcatgactcctaactacatagactccagcagcc 644
Query: 437 tcagtgtggcgccgtggtgtgattgcagcaacagtggcaatgacctggaagattgcctga 496
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tcagtgtggcgccgtggtgcgattgcagcaacagtggcaatgacctggaagattgcctga 584
Query: 497 agtttctgaatttttttaaggacaatacgtgtctcagtgagtttttttgtttgcatgttt 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 583 agtttctgaatttttttaaggacaatacgtgtctcagtgagtttttttgtttgcatggtt 524
Query: 557 gtttatttcttttttaaataagacaaatgccagtgcatctgtgtcttcctctttgagcgg 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gtttatttcttttttaaataagacaaatgccagtgcatctgtgtcttcctctttgagcgg 464
Query: 617 aagctctgtctgtctgctatgtcctcccttccctttcctttctccct 663
||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aagttctgtctgtctgctatgtcctcccttccctttcctttctccct 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_g17.g1 MSMg01no532_g17.g1 CHROMAT_FILE:
MSMg01no532_g17.g1 PHD_FILE: MSMg01no532_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:20 2005
(337 letters)
>mm_chr19_58182772_58183509
Length = 738
Score = 484 bits (250), Expect = e-141
Identities = 327/374 (87%), Gaps = 37/374 (9%)
Strand = Plus / Plus
Query: 1 ataaatgtaccattagaaaacttcattggggttaagccacaggcagacatcctgcttttc 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaatgtaccattagaaaacttctttggggttaagccacaggcagacatcctgcttttc 260
Query: 61 cacgtgccatgttaccagggacttggtgctggcagaggctgctgtctggaagcttggagc 120
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cgtgtgccatgttaccagggacttggtgctggcagaggctgctgcctggaagcttggagc 320
Query: 121 tctttctctgatcttgacttgatgctccctgcaggcctccattt-ctactgtctgggtct 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 tctttctctgatcttgacttgatgctccctgcaggcctccattttctactgtctgggtct 380
Query: 180 ttataatggatagtaggaccagggtctgggccggccaccgtcagtaatcgtcagtaggtg 239
||||||||||||||| ||||||||||||||| | || |||||||||||||||| ||||||
Sbjct: 381 ttataatggatagtaagaccagggtctgggctgaccgccgtcagtaatcgtcactaggtg 440
Query: 240 gtgtgcac--atacacacatacacacacacacacacacaca--------cacacagac-- 287
|||||||| ||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 441 gtgtgcacctatacacacacacacacacacacacacacacagacacacacacacagacac 500
Query: 288 ------------------ccaccacacacagagagacacaaacaca------cacacagg 323
|||||||||||||||||||||||||||| ||||||||
Sbjct: 501 acacacacagacacagacccaccacacacagagagacacaaacacatacacacacacagg 560
Query: 324 acagaaagagacag 337
||||||||||||||
Sbjct: 561 acagaaagagacag 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
