NNCCCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCATGGCCTAGGGCCCCCTCTGGGGTGATAGCACAGAAAAGG
GACATTTCCTAGGGAGTGTACACCTGAGACATTTCACGGTCAAACAAAAT
TCTCCTAACTCTAGCCCTGCCACCCCAGAGGCTCCTGACACCTCCACCTG
AAACAAGAAATGACAGAAAGTCACCTGGATCTGCTGCCTTCAGAGTAAGT
CTGTTTATGACTCTTTCTGAACTTAGAAAAGGCTGAACATCGATTTAATT
CTGGTATCTCAGATCAATGTGAGACATCACCCATCACCGAATGTCCTGAG
TTAAGTCTATGTGGTGGCCATCTCTGGTTGTCTTTACTGTTTGCTTCTCT
GTATATCTTGGTGTCAGGACATGGACTTAGAACCAACAGGGCTTTACCAG
ATCTTGGAGAATGTCAGTGTGGTGATCTCTGGTGGGTTTACCTGGAAACA
TTGTGGTCATGGGAGGTGTACTGGCTAGTTTTGTGTCAACTTGACACAGC
TGGAGTTATCACAGAGAAAAGAGTTTCAGTTGAGGAAATGCCTCATGAGA
TCCAACTGTAAGGCATTTTCTCAATTAATGATCAAGGGGGAAAGGCCCCT
TGTGGGTGGGACCATCTCTGGTCTGGTAGTCTTGGTTCTATAAGAGAGCA
GGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGGAACATCCCTCCATGGC
CTCTGCATCAGN

TTCTCCTAACGCTTTCGTACTCCTCCAAGAGAATGGTGTCCTCGTGCTTT
TCTCTCAATATCTAGGGTGACACGTACTAGTAATGCGATCTCGTCGCGAA
CTTTCTTCTCCTTGACAGGAATCACCTCAACTGTGCAGCTAGAAGACACT
CTCGCAAAATAGATGTTGCATACACTCCTCTAAATNCATTCCGTGGCATC
TTGTCATAGATCATAAATCAACTCTCTGTAGTATTACCTTCCTGCACTAC
GCTAGTTCAGAAATGGGTCTATAAGATCTATAAAATTACATTGCTGACCA
GCTAGTATAGCGTGGTCGCTGGCACTGTGTGATGAATAGAGCGGTACACT
TCTCTCTCACTTGCTTGTGTGCGGATATGCACGGCTCTGTGACACACTAT
CTTCATGGACAATCCAGTCATAGGCAGGAGTTCATTACGAACAAGTTGTG
TACATACGTTATTTACCCTGCGAAGAATATCAGCCATATATCCTCTCTCC
CTGTGGTCACTATACTACACGCATATATTGTGCCCCATTCTGGTGTACAG
CAAGAGGACAACACCGCTTCTCTACTCACTGTTTCCATATGACCAGTACC
CTTTCTGTCTATCATATATGGCTTACATAAAGCCACGTGAAGACTGAACC
CCCANTATAGGTTCCTCCTTCAACTCAATATCGATTTTGGGGTGTATCCC
GACTATCAAGTTGCGTACTCTATCTTGACATATCTGAAAGGCACGCTAGC
TTAACCTGTGTGCTTTATTCTACACAATGAGTATATCGAAGATTCTATCT
TAGTAAATCTGCTCCTTCAGATTCTCTCACGGTGGAAATGCTGCACTCCT
GACGCAGTAGTACCAGCCCCCCTCACTCTTACAATGGATGGTCNCANATC
ACCATATGCCGTCTATATCGGGAAGTCTTTCACGCCTATTTACGAGGGCG
AGCGTTCGCGTTGGTTATACAGGTGTGAAGACATGAGACTTCGTATTAAT
GTTTTCTATGGCTGATAACCCCTCTCTGTATACTTTGTGGTTATATCACT
TTTTTCGTCNTCAATATCTACGCCGGGATATATCCTTTCACGTCATAACA
ACGCGCGATGTATAGCTGGTCTAATTCTCTCTCCACCTTT

Query= MSMg01no535_p12.b1 MSMg01no535_p12.b1 CHROMAT_FILE:
MSMg01no535_p12.b1 PHD_FILE: MSMg01no535_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:56 2005
         (646 letters)



>mm_chr19_18213205_18214250
          Length = 1046

 Score = 1151 bits (595), Expect = 0.0
 Identities = 631/643 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccatggcctagggccccctctggggtgatagcacagaaaagggacatttcctag 63
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatggcctagggcctcctctggggtgatagcacagaaaagggacatttcctag 263

                                                                       
Query: 64  ggagtgtacacctgagacatttcacggtcaaacaaaattctcctaactctagccctgcca 123
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggaatgtacacctgagacatttcacggtcaaacaaaattctcctaactctagccctgcca 323

                                                                       
Query: 124 ccccagaggctcctgacacctccacctgaaacaagaaatgacagaaagtcacctggatct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccagaggctcctgacacctccacctgaaacaagaaatgacagaaagtcacctggatct 383

                                                                       
Query: 184 gctgccttcagagtaagtctgtttatgactctttctgaacttagaaaaggctgaacatcg 243
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 384 gctgccttcagagtaagtctgtttatgactctttctgaacttaggaaaggctgaacatcg 443

                                                                       
Query: 244 atttaattctggtatctcagatcaatgtgagacatcacccatcaccgaatgtcctgagtt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atttaattctggtatctcagatcaatgtgagacatcacccatcaccgaatgtcctgagtt 503

                                                                       
Query: 304 aagtctatgtggtggccatctctggttgtctttactgtttgcttctctgtatatcttggt 363
           |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 504 aagtctatgtggtggctatctctgtttgtctttactgtttgcttctctgtatatcttggt 563

                                                                       
Query: 364 gtcaggacatggacttagaaccaacagggctttaccagatcttggagaatgtcagtgtgg 423
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||
Sbjct: 564 gtcaggacatggacttagaactaacagggcttcaccagatcttggagaatgtctgtgtgg 623

                                                                       
Query: 424 tgatctctggtgggtttacctggaaacattgtggtcatgggaggtgtactggctagtttt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgatctctggtgggtttacctggaaacattgtggtcatgggaggtgtactggctagtttt 683

                                                                       
Query: 484 gtgtcaacttgacacagctggagttatcacagagaaaagagtttcagttgaggaaatgcc 543
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 684 gtgtcaacttgacacagctggagttatcacagagaaaggagtttcagttgaggaaatgcc 743

                                                                       
Query: 544 tcatgagatccaactgtaaggcattttctcaattaatgatcaagggggaaaggccccttg 603
           ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 744 tcatgagatccaactgtaaggcattttgtcaattagtgatcaagggggaaaggccccttg 803

                                                      
Query: 604 tgggtgggaccatctctggtctggtagtcttggttctataaga 646
           ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 804 tgggtgggaccatctgtggtctggtagtcttggttctataaga 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)