ACGTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAAATCATTTGTGGTAACAGATTGGATAGAAAGGCATTTTGG
AGAACTTTTAAAGTGAACATTAAAGTGAACTTCTGGGGGTATTGTGAGGG
TGTTTCCAGAGAGGAGCAACTACCTGCATTCTGGGTAGGTGTTAGAGTTT
CCTATTGTATTGCTGCTATAAAATACTATGACCAGAGCAACTTAAGGCTG
ATGACTGCTGTGAGTGAGGAATGTTCCTATAAATGCATATATTTGAATAC
TTGGCCACTAATTGGTGGTGCTTTGGGGGAAGTTATAGAATTCTGAAAAG
ATGCAGCCTTACTGGAAAAAGCACATGGGTGGGGGCGGCGGGCTTTGAGA
ATTTATAGCATCATTCTACTTCCTGTTCTATCTCAGTCTCTTCCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCACCTCCTCCTTCTCCTCCTCTCTTTTTA
CTCTGTTTTTGTTGCATTTTGTTCACTATGTCTTCTGTAATGTTGAATTT
ATAATTCTGTCTCCTTAGTTAACTTGTATTTTTTCCCACCCTTTTTTTTT
ACAACTATTGTTGTTTTTTTTATCCCTGATCTTAATTAGATGCCTTATTC
TTCTGAGGTCTTTTTTTCACTAATTATATCTTCTAAAGTATTCTTATTTT
GCGCATTTTTCCTTCTCTTCTTTTTTTTGTCTCTTTCTTTTCTTTTTTTT
TTTTTGCCTCTTAGATN

TGANTTNTACATGCTATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACAGGAAGAACTCTGGAT
ACCTTTGCCCTCTTTCCTTTGCTCTTCTTAGAAGTGCCACGAGCTGTTTA
AAACCTGTTTCAGCCTGAAGACCTGACTACTTTCTGAGTCCATGCTTGAG
CTGAATAAAACCAAGTGGGATTCATCTGTACTTGCATATAAGAAGGGACA
AAGGGAACATTAAATACCTTGCTCCTTATGAACTTCTGAAATTGCTAGAG
CAGAAGAAACTCAACACATGTGACTTTCATGGCTTCGTTTTTAATTGGTT
ATTGGTTACCTGCATGGGTACACATGCGACAGCATTGTCTGGAGGTCAGA
GGGCAACTTTGTGGAGTTCATTTTCTCTGTCCACCTTTCTGTGGGTTCTG
GGGGTTGAACTCAAGGCACTAAGAACCTTTATCCACTGAGCTATCTCATA
AGGCCCTCTTCTTGCAGAAGGATCACTAGCTATCTTGAGAGGCTGAACCT
AGAACCTGCTACTTAGGGAAAAATGAATGTAGAGCCACTGTCCATGGATC
AAACACTGTTGTTCTTTTCTACATGAGCTTAAACAACTGTCTTATCCCAG
TGGATGTCTGTTTTCCCTGCTCTCCAGCCTTATGTTACTCTTCTGGTGTA
CATACCTTCCTTTGCCTTATACTNCACCN

Query= MSMg01no540_m23.g1 MSMg01no540_m23.g1 CHROMAT_FILE:
MSMg01no540_m23.g1 PHD_FILE: MSMg01no540_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:13 2005
         (563 letters)



>mm_chr19_60171242_60172204
          Length = 963

 Score = 1089 bits (563), Expect = 0.0
 Identities = 563/563 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacaggaagaactctggatacctttgccctctttcctttgctcttcttagaagtgccacg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaggaagaactctggatacctttgccctctttcctttgctcttcttagaagtgccacg 260

                                                                       
Query: 61  agctgtttaaaacctgtttcagcctgaagacctgactactttctgagtccatgcttgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgtttaaaacctgtttcagcctgaagacctgactactttctgagtccatgcttgagc 320

                                                                       
Query: 121 tgaataaaaccaagtgggattcatctgtacttgcatataagaagggacaaagggaacatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaataaaaccaagtgggattcatctgtacttgcatataagaagggacaaagggaacatt 380

                                                                       
Query: 181 aaataccttgctccttatgaacttctgaaattgctagagcagaagaaactcaacacatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaataccttgctccttatgaacttctgaaattgctagagcagaagaaactcaacacatgt 440

                                                                       
Query: 241 gactttcatggcttcgtttttaattggttattggttacctgcatgggtacacatgcgaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactttcatggcttcgtttttaattggttattggttacctgcatgggtacacatgcgaca 500

                                                                       
Query: 301 gcattgtctggaggtcagagggcaactttgtggagttcattttctctgtccacctttctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcattgtctggaggtcagagggcaactttgtggagttcattttctctgtccacctttctg 560

                                                                       
Query: 361 tgggttctgggggttgaactcaaggcactaagaacctttatccactgagctatctcataa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggttctgggggttgaactcaaggcactaagaacctttatccactgagctatctcataa 620

                                                                       
Query: 421 ggccctcttcttgcagaaggatcactagctatcttgagaggctgaacctagaacctgcta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggccctcttcttgcagaaggatcactagctatcttgagaggctgaacctagaacctgcta 680

                                                                       
Query: 481 cttagggaaaaatgaatgtagagccactgtccatggatcaaacactgttgttcttttcta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttagggaaaaatgaatgtagagccactgtccatggatcaaacactgttgttcttttcta 740

                                  
Query: 541 catgagcttaaacaactgtctta 563
           |||||||||||||||||||||||
Sbjct: 741 catgagcttaaacaactgtctta 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)