BAC Information

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BAC

Clone NameB6Ng01-003I05
Chromosome2 (Build37)
Map Location 47,109,599 - 47,110,776
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003I05.bB6Ng01-003I05.g
ACCDH841201DH841202
length1,1721,225
definitionDH841201|Mus musculus domesticus DNA, BAC clone: B6Ng01-003I05, 5' end.DH841202|Mus musculus domesticus DNA, BAC clone: B6Ng01-003I05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgggttgcaagtaaagtttacttaaatactcccccacaataa
attaattttcagattacttaatgtaagaagcaatcaggtcaaattagtca
tcggtctacaatctccttccaggttgtgtctctgcagatccagtagaatt
aacaatatctcaaattctttgttctccaaaattcacatgaaggtttaaaa
cagaaagaaagggattaaatttaaaacaaatgacaatcatatctttattc
tgagtaatcaaaataacatcattagaattaaaataattactttttcattt
gcctttgtgtcctattaagcattcaatgtaggttcctgtatatgctgagc
aaatgcttaacctctaggtcatacacaagaccatatagatgattttattt
tctactcctgggatgaaggaattctcttcctaacataagtgaaaatctaa
tcaagatgtatggaacagctatttgtaggactgttgttagggactgattc
tggttcacaaggcaaagaaaatgttgtgaggtaatgtcacaactgtcatg
gccactggctttgttccaacttttggaacgtagtatataggagtgtgcca
caacaggggagaatctaacaactgtaatgagggaagaagacagaagctgc
attggagccatgaaaatggctgaatttaaggagcacacactgaaaggggt
accctaaagaaaagcagcccagaaacctatgtaatcctccattttaactt
tttattaaatactaaggctcatgtactcagagtaaagttttctaagatta
gtgtattagttacttttctgatgctgtgataaaacaccatgaccaagaca
gcttttagaatggaaggatttatttgcattattgcagttcagaagggata
agagactatcatggtatggaagcatgacagcaagcatcagtcacagcaga
actgtatctgaaagcccacttttgaaaatttgggaagaaacagaaaatat
aaaaaaaatagagccaaacttatctctcaaatgtcttgccatatgcatga
cgctcttcaggaagaccacagcaactactaatttcaaccggactatcagc
tggggaccagtcaagaataatgatcatggatggttagtctaatctaatcc
aaagtgaccccacggggcagga
gaattcccctgatagctaaagttgctaaatatttttaaaaagtttctcag
gtatttgtgtttatcttttaataactccgtttcttttcatgccttatttt
atatttggattttcctgtttaaagggtttgctcatgtgatttttgatgtt
ttgcatattctagatatgaactctttgtcacatgtgtagctgataaataa
tttccctgttctgcagtctccctcacaaatactcatgtttcttgctgtgc
agactctactttcacgtggtctcatttgtcagttactagtcttcatgcct
gtgctacctagagcctgttgagaaagtccttttctataggtatggctgca
gatattttgctaatatctcatctgtcagactgagggcatcaggtcttata
ttaatgatctcgatcaatttgaagttgacttttgtgaagggtctgaggta
agaatctagtttcattgttctacatgtaattatagtttgactacaaacat
ttgtggtatttttacctcatttgtaaatttttggcatctttagcaaaatt
caaatgactgtaggagtatgaacttaaaggtgtgtgcttaactctaaccc
actgttcaataggtctggatttatgcaagaattatgttttattactataa
ttctgtaatataagttaaagttagagatggaataatttgtattaggtatt
ttattgttcaattttttttctgtcctgggatatgtatgtgtcccaatgaa
atttggaattttgatggggattgaattaaatacttcaatttctttttgta
gccattttcacaatattttacagtattctcttattttgaataagccttcc
attttgagtagtggtctattaaagttaagttcccaagacctccctgggaa
ctgacatcctactaggcaaagggaggcatttactggtaactgacatcctt
gtgacagtgagacatgatcattaacaattcccacctggtagacagttaga
acagaagtatggacaggcagtccctgacgcagctgaatactagcaacgaa
tcagcataatgtcaacaagactatcctaagaattccatacctagtctgat
ataaataactgctgatgtttgggctcggctcaaccctgaggatcacccaa
tctgtcagttcggaattggacatgcagtgcagtcttggtactgtctctat
cgcaactatatgatctagtcttcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47109599_47110776
seq2: B6Ng01-003I05.b_44_1215

seq1  GAATTCTTTGGGTTGCAAGTAAAGTTTACTTAAATACTCCCCCACAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGTTGCAAGTAAAGTTTACTTAAATACTCCCCCACAATAA  50

seq1  ATTAATTTTCAGATTACTTAATGTAAGAAGCAATCAGGTCAAATTAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTCAGATTACTTAATGTAAGAAGCAATCAGGTCAAATTAGTCA  100

seq1  TCGGTCTACAATCTCCTTCCAGGTTGTGTCTCTGCAGATCCAGTAGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTCTACAATCTCCTTCCAGGTTGTGTCTCTGCAGATCCAGTAGAATT  150

seq1  AACAATATCTCAAATTCTTTGTTCTCCAAAATTCACATGAAGGTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATCTCAAATTCTTTGTTCTCCAAAATTCACATGAAGGTTTAAAA  200

seq1  CAGAAAGAAAGGGATTAAATTTAAAACAAATGACAATCATATCTTTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAAGGGATTAAATTTAAAACAAATGACAATCATATCTTTATTC  250

seq1  TGAGTAATCAAAATAACATCATTAGAATTAAAATAATTACTTTTTCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATCAAAATAACATCATTAGAATTAAAATAATTACTTTTTCATTT  300

seq1  GCCTTTGTGTCCTATTAAGCATTCAATGTAGGTTCCTGTATATGCTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGTGTCCTATTAAGCATTCAATGTAGGTTCCTGTATATGCTGAGC  350

seq1  AAATGCTTAACCTCTAGGTCATACACAAGACCATATAGATGATTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTAACCTCTAGGTCATACACAAGACCATATAGATGATTTTATTT  400

seq1  TCTACTCCTGGGATGAAGGAATTCTCTTCCTAACATAAGTGAAAATCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCCTGGGATGAAGGAATTCTCTTCCTAACATAAGTGAAAATCTAA  450

seq1  TCAAGATGTATGGAACAGCTATTTGTAGGACTGTTGTTAGGGACTGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATGTATGGAACAGCTATTTGTAGGACTGTTGTTAGGGACTGATTC  500

seq1  TGGTTCACAAGGCAAAGAAAATGTTGTGAGGTAATGTCACAACTGTCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCACAAGGCAAAGAAAATGTTGTGAGGTAATGTCACAACTGTCATG  550

seq1  GCCACTGGCTTTGTTCCAACTTTTGGAACGTAGTATATAGGAGTGTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGGCTTTGTTCCAACTTTTGGAACGTAGTATATAGGAGTGTGCCA  600

seq1  CAACAGGGGAGAATCTAACAACTGTAATGAGGGAAGAAGACAGAAGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGGGAGAATCTAACAACTGTAATGAGGGAAGAAGACAGAAGCTGC  650

seq1  ATTGGAGCCATGAAAATGGCTGAATTTAAGGAGCACACACTGAAAGGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGCCATGAAAATGGCTGAATTTAAGGAGCACACACTGAAAGGGGT  700

seq1  ACCCTAAAGAAAAGCAGCCCAGAAACCTATGTAATCCTCCATTTTAAC-T  749
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACCCTAAAGAAAAGCAGCCCAGAAACCTATGTAATCCTCCATTTTAACTT  750

seq1  TTTATTAAATACTAAGGCTCATGTACTCAGAGTAAAGTTTTCTAAGATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAAATACTAAGGCTCATGTACTCAGAGTAAAGTTTTCTAAGATTA  800

seq1  GTGTATTAGTTACTTTTCTGATGCTGTGATAAAACACCATGACCAAGACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTAGTTACTTTTCTGATGCTGTGATAAAACACCATGACCAAGACA  850

seq1  GCTTTTAGAA-GGAAGGACTTATTTGCATTATTGCAGTTCCAGAGGGATA  898
      |||||||||| ||||||| |||||||||||||||||||||   |||||||
seq2  GCTTTTAGAATGGAAGGATTTATTTGCATTATTGCAGTTCAGAAGGGATA  900

seq1  AGAGACTATCATGGTATGGAAGCATGACAGCAAGCATCAGTCACAGCAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGAGACTATCATGGTATGGAAGCATGACAGCAAGCATCAGTCACAGC-AG  949

seq1  AACTGTATCTGAAAGCCCACATTTTGAAAAATAGGGAAGAAACAGAAAAT  998
      |||||||||||||||||||| ||||||||| | |||||||||||||||||
seq2  AACTGTATCTGAAAGCCCAC-TTTTGAAAATTTGGGAAGAAACAGAAAAT  998

seq1  AGTAAAAAAATAGAGCCAAACTTTAATCTCTCAAAATGTCTTGCCATAAT  1048
      |  ||||||||||||||||||||  ||||||| |||||||||||||| ||
seq2  ATAAAAAAAATAGAGCCAAACTT--ATCTCTC-AAATGTCTTGCCAT-AT  1044

seq1  GCATGACGCTCTTCAGGAAGACCACAGCTACTACATATTTCCAAACAGCA  1098
      |||||||||||||||||||||||||||| |||||  |||||  ||| | |
seq2  GCATGACGCTCTTCAGGAAGACCACAGCAACTACTAATTTC--AACCGGA  1092

seq1  CTATCAGCTGGGGACCAGTCAAGAA-AATGATCATGAGTGTGTAGTCTAT  1147
      ||||||||||||||||||||||||| ||||||||||  ||  ||||||| 
seq2  CTATCAGCTGGGGACCAGTCAAGAATAATGATCATGGATGGTTAGTCTA-  1141

seq1  ATCTAATTCAAA-TGACCACAACTGGGCAGGA  1178
      ||||||| |||| ||||| | || ||||||||
seq2  ATCTAATCCAAAGTGACC-CCACGGGGCAGGA  1172