BAC Information

Click to search

BAC

Clone NameB6Ng01-007A15
Chromosome2 (Build37)2 (Build37)
Map Location 142,776,630 - 142,777,69837,224,760 - 37,225,758
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007A15.bB6Ng01-007A15.g
ACCDH843731DH843732
length1,000997
definitionDH843731|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A15, 5' end.DH843732|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,630 - 142,777,698)(37,224,760 - 37,225,758)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtcct
ctatctgatttagaattggtaaagatcttttcccaatcggttggtggtct
ttttgtcttattgacggtgacttttgccttgcagaagcattggagtttca
tgaggtcccatgtgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatatttcccctgtgccgatatcttcaaggcttttccccac
tttttcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattctc
attcttctacatgataatcaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccatagatgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactatacctttaccatacagttttgatcacaattgc
tctgtagtacagttttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcatattgctctttctaattcgttgaagaattgagttggaatttt
gatggggctcgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatcttcacttccttagttagagtcactccaggatattttctatatttg
tgactatgagaagggtgttgtttccctaatttctttctcagcctgtttat

gaattctgtgtgtttttgctgtagcactgaagtgaagagatattagcttt
ggctgttcacaaaatagagcatcatgattttcagtgtttgagagaaaatt
gatggaaaaagtttgcagtacttgacatgtatttgcatgcacaaaataaa
attatttgtccaccttaaaagttgttttcttagtgtcaatgttaagttta
tggtatgttttagttgtcctgattttcttgatatatcttaataaaactag
aaagacactactaaactagggacttaattgatcacctacttcattggtat
atcattgggaagtaaatagacccaaagaagttgaaatacttcttaattct
gtctggcatttcattcaatagagagcgctttctaaatgggggaatggtgt
aaaatagataatactgaacttacagtctttgggacagataaagagagatg
cataaataaaacaaagtcattctgtaggcttcagaaaaaattttaaagat
ggcctaaatctcagcaccatttttaatgaccccagagtacctttatttat
tcacccagctgatgtgtcctaagcccccatctctcctggtcttttaagac
taggttaatgaaatgagccctttccctggatgctcatagtgtagaaatgg
gaaagaccagattgaatagctctgagagctacatacaaaggggccagttg
ttatgttgagcaagaggaggtacttctgtgagagaccctctggctagact
ttaaatcttgcataacctttttaccagtagcagattaccttcctgaccca
cttgatctttacacctgttttgtattttcattgttttatatttgagattg
ttatataatttgccaaaatcttacaatcagaaagtaatagagtcagagtt
ctgctgtcttttctgtctctcaaaatgtaatggtgatggtagttgatcca
ttttcactttagtagaaagtgtgataagagatagggctcactgacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776630_142777698
seq2: B6Ng01-007A15.b_43_651 (reverse)

seq1  TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAG  50
      |||||||||||||||||||| ||||||| ||||||  ||||||| |||||
seq2  TACTACAGAGCAATTGTGATCAAAACTGTATGGTAAAGGTATAGTGACAG  50

seq1  ACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  100

seq1  CCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAG  150
       ||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAG  150

seq1  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATG  200
      |||||||||||||||||||| |||||||||||||||||||  ||||||||
seq2  AAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGATTATCATG  200

seq1  TAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAAT  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAATGAGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAAT  250

seq1  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATA  300

seq1  GAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATT  350
      ||||| |||||||||||||||||||||||||| ||||||||||| | |||
seq2  GAGGAAAAAGTGGGGAAAAGCCTTGAAGATATCGGCACAGGGGAAATATT  350

seq1  CCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAAT  400
      |||||| |||||||||||||||||||||||||||||||||||||||| ||
seq2  CCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACACAT  400

seq1  GGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAAT  450
      ||||||| |||||||||||| | |||||||||||||||| ||||||||||
seq2  GGGACCTCATGAAACTCCAATGCTTCTGCAAGGCAAAAGTCACCGTCAAT  450

seq1  AAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAA  500
      |||||||||||||||||||| |||||||||| |||||||||| || ||||
seq2  AAGACAAAAAGACCACCAACCGATTGGGAAAAGATCTTTACCAATTCTAA  500

seq1  ATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGG  550
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATAGAGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGG  550

seq1  ACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCAT  600
      ||||||||||||||||||||||||||||||||||||||||| ||      
seq2  ACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAA------  594

seq1  CCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGT  650
            ||| |||||    |||                            
seq2  ----CTGAACAAAGA----ATTC---------------------------  609

seq1  TGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACT  700
                                                        
seq2  --------------------------------------------------  609

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACT  750
                                                        
seq2  --------------------------------------------------  609

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAG  800
                                                        
seq2  --------------------------------------------------  609

seq1  GGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGA  850
                                                        
seq2  --------------------------------------------------  609

seq1  ATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGA  900
                                                        
seq2  --------------------------------------------------  609

seq1  CACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTA  950
                                                        
seq2  --------------------------------------------------  609

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTC  1000
                                                        
seq2  --------------------------------------------------  609

seq1  AAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTC  1050
                                                        
seq2  --------------------------------------------------  609

seq1  AGAACTGAACAAAGAATTC  1069
                         
seq2  -------------------  609

seq1: chr2_37224760_37225758
seq2: B6Ng01-007A15.g_66_1062 (reverse)

seq1  TAGTCAGTGAAGCCCTATCTCTTAATCACACTTTCTACTTAAGTGAAAAT  50
      ||||||||| ||||||||||||| ||||||||||||||| ||||||||||
seq2  TAGTCAGTG-AGCCCTATCTCTT-ATCACACTTTCTACTAAAGTGAAAAT  48

seq1  GGATCCAACTACCATCACCATTACCTTTTTGAGAGACAG-AAAGACAGCA  99
      |||| |||||||||||||||||| | ||||||||||||| ||||||||||
seq2  GGAT-CAACTACCATCACCATTA-CATTTTGAGAGACAGAAAAGACAGCA  96

seq1  GAACTCTGACTCTATTACTTTCTGATTGTAAGATTTTGGCAAATTATATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGACTCTATTACTTTCTGATTGTAAGATTTTGGCAAATTATATA  146

seq1  AC-ATCTCAAATATAAAACAATGAAAATACAAAACAGGTGTAAAGATCAA  198
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTCAAATATAAAACAATGAAAATACAAAACAGGTGTAAAGATCAA  196

seq1  GTGGGTCAGGAAGGTAATCTGCTACTGGTAAAAAGGTTATGCAAGATTTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCAGGAAGGTAATCTGCTACTGGTAAAAAGGTTATGCAAGATTTA  246

seq1  AAGTCTAGCCAGAGGGTCTCTCACAGAAGTACCTCCTCTTGCTCAACATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGCCAGAGGGTCTCTCACAGAAGTACCTCCTCTTGCTCAACATA  296

seq1  ACAACTGGCCCCTTTGTATGTAGCTCTCAGAGCTATTCAATCTGGTCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGGCCCCTTTGTATGTAGCTCTCAGAGCTATTCAATCTGGTCTTT  346

seq1  CCCATTTCTACACTATGAGCATCCAGGGAAAGGGCTCATTTCATTAACCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTCTACACTATGAGCATCCAGGGAAAGGGCTCATTTCATTAACCT  396

seq1  AGTCTTAAAAGACCAGGAGAGATGGGGGCTTAGGACACATCAGCTGGGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAAAAGACCAGGAGAGATGGGGGCTTAGGACACATCAGCTGGGTG  446

seq1  AATAAATAAAGGTACTCTGGGGTCATTAAAAATGGTGCTGAGATTTAGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAAGGTACTCTGGGGTCATTAAAAATGGTGCTGAGATTTAGGC  496

seq1  CATCTTTAAAATTTTTTCTGAAGCCTACAGAATGACTTTGTTTTATTTAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAAAATTTTTTCTGAAGCCTACAGAATGACTTTGTTTTATTTAT  546

seq1  GCATCTCTCTTTATCTGTCCCAAAGACTGTAAGTTCAGTATTATCTATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCTCTTTATCTGTCCCAAAGACTGTAAGTTCAGTATTATCTATTT  596

seq1  TACACCATTCCCCCATTTAGAAAGCGCTCTCTATTGAATGAAATGCCAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCATTCCCCCATTTAGAAAGCGCTCTCTATTGAATGAAATGCCAGA  646

seq1  CAGAATTAAGAAGTATTTCAACTTCTTTGGGTCTATTTACTTCCCAATGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTAAGAAGTATTTCAACTTCTTTGGGTCTATTTACTTCCCAATGA  696

seq1  TATACCAATGAAGTAGGTGATCAATTAAGTCCCTAGTTTAGTAGTGTCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAATGAAGTAGGTGATCAATTAAGTCCCTAGTTTAGTAGTGTCTT  746

seq1  TCTAGTTTTATTAAGATATATCAAGAAAATCAGGACAACTAAAACATACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTTTATTAAGATATATCAAGAAAATCAGGACAACTAAAACATACC  796

seq1  ATAAACTTAACATTGACACTAAGAAAACAACTTTTAAGGTGGACAAATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTTAACATTGACACTAAGAAAACAACTTTTAAGGTGGACAAATAA  846

seq1  TTTTATTTTGTGCATGCAAATACATGTCAAGTACTGCAAACTTTTTCCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTGTGCATGCAAATACATGTCAAGTACTGCAAACTTTTTCCAT  896

seq1  CAATTTTCTCTCAAACACTGAAAATCATGATGCTCTATTTTGTGAACAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTCTCTCAAACACTGAAAATCATGATGCTCTATTTTGTGAACAGC  946

seq1  CAAAGCTAATATCTCTTCACTTCAGTGCTACAGCAAAAACACACAGAATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAATATCTCTTCACTTCAGTGCTACAGCAAAAACACACAGAATT  996

seq1  C  999
      |
seq2  C  997