BAC Information

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BAC

Clone NameB6Ng01-007M04
Chromosome2 (Build37)
Map Location 7,829,069 - 7,949,174
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040648
Downstream geneLOC672230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007M04.bB6Ng01-007M04.g
ACCDH844232DH844233
length1,0691,006
definitionDH844232|Mus musculus domesticus DNA, BAC clone: B6Ng01-007M04, 5' end.DH844233|Mus musculus domesticus DNA, BAC clone: B6Ng01-007M04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,948,094 - 7,949,174)(7,829,069 - 7,830,085)
sequence
gaattcttctctaaattcaaaacctatccctgctgactgttaggagcaga
aaccggggattatgctaatttggattattaattagctgttctatttcccc
agaatgcaagggatgacatctataccaacacgcctgtctatccctccaat
agcaagaagagacagaagaaaagctgcttccaatgctaaagttaggatac
tgcaaagggctctggaaaacagggctaggtcgtgggaatttcttagcgca
tccatgattgttcagaacactgatgatgggggttctgtatgcagatgaag
tctcggaggcgtggccagtattcagcattctacctctaacagtgctgcct
tcttttcactgcttagttagaagtatccacaatatttataacatccttcc
tcctgtctggggattttattataagacaacagggactggaaaaactatgg
tcatgtaaaaacagttaacacaagaccttttcattcatgtagtttttcat
gtgttctgtatatgcatgtgtgtgtgtgcatgtgtgtatgtgcatgtgtg
tgtgtgtgtgtgtgtactcatatttgctcacgtgtgcacatacctgtgga
ggctgacgttaatactaggcatcttcttggatcgtgctccactttatact
caggcacaatctcatccggaacccggttgcctaggtaaccagacatcttc
tgtctttgcttcttcagtgaaattataggtagccaccacaactacatagc
tgttaagtgggttctagagttccgaagctcagtcttcctgcatggcgaaa
cctctatccaccgtgtcgtctccataatcctcatgaccaagtttacaacc
tgcctcagtatttaagagtgtggagcacctggaactttgacgaccacagt
tctatgatgctataattcatgagcttggccctatataatttcattatctt
tgcctcggcataggagattttgtaacagagctttactcatcaataatgcc
aatttcccaagttgtctttgtattccaaagtgtctcataagtttgcgact
gtactgtttatactgaggc

gaattcagattccagcagacacagatatgggttaggtctggtggcacctg
cctttaaactaagcacttgcaggcagaggcagagatatatctgtatgatt
aaggccagtctgatccacatggcaagttccagaccaaagaatagaacatg
atacgcccatgtctctaagagcgttgggtttgtgcgaaatcaaaaaaagt
ggatcttaaattctagcagctataggggactttcgggatagcacttgaaa
tgtaaatgaagaaactatctaaaaaattttttttaaaaagatagaaaaac
agccttattcaagagggtatttgttcacccatttttttaaataaaatata
atcttaatacatacaggttataaattaaaatcattttcctttttttcatt
aaaaaatattgtaatgtctagtgactacttgagtcagtgatcttcagttc
tcacaagaaatctcatctcaaacagtaacaggaagactaatcaagataga
cattcaatcttgacctcttgtatctttatgctgactcttacatgtacagt
cagacacacagacacacagacacatgcacacacagacacacacacaccca
tctacgaaaagaagcttctgtctaaaggaaatatggagacaaatagtgga
atggagactgaaggaaagaccatccagagactgccccacctggggatcca
tcccatatacagacaccaaacccagacactattgctgaagccaagaattg
cttgctggcaggtgcctgatacagctgtttcctgagagtctttgccagat
cctacccaatacagatgtggatgctcgcagccaaccatcaaactgagcac
cagggacccaatggaggataggagaagactgaagaagctgaaggagcctt
atctggcatcaatgagaggagaggccttggtcctgtgaaggcttgatgct
ccagtgtagaggaatgctagatggagagcaagtgggtgatgatggggagc
actcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_7948094_7949174
seq2: B6Ng01-007M04.b_42_1110 (reverse)

seq1  GCCTCAGTAT-AACAGTACAGTCTGCCAAACTTATGAGACACTCTGAAAT  49
      |||||||||| ||||||||||||   ||||||||||||||||| || |||
seq2  GCCTCAGTATAAACAGTACAGTC--GCAAACTTATGAGACACTTTGGAAT  48

seq1  ACAGAGACAACTTTGGGGAAATTGGCATTATTTGAATGAGTAAAGCTTCT  99
      ||| |||||||||  |||||||||||||||||   ||||||||||| |||
seq2  ACAAAGACAACTT--GGGAAATTGGCATTATT--GATGAGTAAAGC-TCT  93

seq1  GTTTACAAAAATCTTCCTATGCCGAGGCAAAGATAATGAAAATTATATAG  149
      | |||| |||||| |||||||||||||||||||||||| |||||||||||
seq2  G-TTAC-AAAATC-TCCTATGCCGAGGCAAAGATAATG-AAATTATATAG  139

seq1  GGCCAAAGCTCATGAATTATAGCATCATAGAACTGTGGTCGTCAAAGTTC  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCC-AAGCTCATGAATTATAGCATCATAGAACTGTGGTCGTCAAAGTTC  188

seq1  CAGGTGCTCCCACACTCTTAAATACTGAGGCAGGTTGTAAACTTGGTCAT  249
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCT-CCACACTCTTAAATACTGAGGCAGGTTGTAAACTTGGTCAT  237

seq1  GAGGATTATGGAGACGACACGGTGGATAGAGGTTTCGCCATGCAGGAAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTATGGAGACGACACGGTGGATAGAGGTTTCGCCATGCAGGAAGA  287

seq1  CTGAGCTTCGGAACTCTAGAACCCACTTAACAGCTATGTAGTTGTGGTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTTCGGAACTCTAGAACCCACTTAACAGCTATGTAGTTGTGGTGG  337

seq1  CTACCTATAATTTCACTGAAGAAGCAAAGACAGAAGATGTCTGGTTACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTATAATTTCACTGAAGAAGCAAAGACAGAAGATGTCTGGTTACCT  387

seq1  AGGCAACCGGGTTCCGGATGAGATTGTGCCTGAGTATAAAGTGGAGCACG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACCGGGTTCCGGATGAGATTGTGCCTGAGTATAAAGTGGAGCACG  437

seq1  ATCCAAGAAGATGCCTAGTATTAACGTCAGCCTCCACAGGTATGTGCACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGAAGATGCCTAGTATTAACGTCAGCCTCCACAGGTATGTGCACA  487

seq1  CGTGAGCAAATATGAGTACACACACACACACACACACATGCACATACACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGCAAATATGAGTACACACACACACACACACACATGCACATACACA  537

seq1  CATGCACACACACACATGCATATACAGAACACATGAAAAACTACATGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACACACACACATGCATATACAGAACACATGAAAAACTACATGAAT  587

seq1  GAAAAGGTCTTGTGTTAACTGTTTTTACATGACCATAGTTTTTCCAGTCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTCTTGTGTTAACTGTTTTTACATGACCATAGTTTTTCCAGTCC  637

seq1  CTGTTGTCTTATAATAAAATCCCCAGACAGGAGGAAGGATGTTATAAATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTCTTATAATAAAATCCCCAGACAGGAGGAAGGATGTTATAAATA  687

seq1  TTGTGGATACTTCTAACTAAGCAGTGAAAAGAAGGCAGCACTGTTAGAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGATACTTCTAACTAAGCAGTGAAAAGAAGGCAGCACTGTTAGAGG  737

seq1  TAGAATGCTGAATACTGGCCACGCCTCCGAGACTTCATCTGCATACAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGCTGAATACTGGCCACGCCTCCGAGACTTCATCTGCATACAGAA  787

seq1  CCCCCATCATCAGTGTTCTGAACAATCATGGATGCGCTAAGAAATTCCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATCATCAGTGTTCTGAACAATCATGGATGCGCTAAGAAATTCCCA  837

seq1  CGACCTAGCCCTGTTTTCCAGAGCCCTTTGCAGTATCCTAACTTTAGCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCTAGCCCTGTTTTCCAGAGCCCTTTGCAGTATCCTAACTTTAGCAT  887

seq1  TGGAAGCAGCTTTTCTTCTGTCTCTTCTTGCTATTGGAGGGATAGACAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCAGCTTTTCTTCTGTCTCTTCTTGCTATTGGAGGGATAGACAGG  937

seq1  CGTGTTGGTATAGATGTCATCCCTTGCATTCTGGGGAAATAGAACAGCTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTGGTATAGATGTCATCCCTTGCATTCTGGGGAAATAGAACAGCTA  987

seq1  ATTAATAATCCAAATTAGCATAATCCCCGGTTTCTGCTCCTAACAGTCAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAATCCAAATTAGCATAATCCCCGGTTTCTGCTCCTAACAGTCAG  1037

seq1  CAGGGATAGGTTTTGAATTTAGAGAAGAATTC  1081
      ||||||||||||||||||||||||||||||||
seq2  CAGGGATAGGTTTTGAATTTAGAGAAGAATTC  1069


seq1: chr2_7829069_7830085
seq2: B6Ng01-007M04.g_66_1071

seq1  GAATTCAGATTCCAGCAGACACAGATATGGGTTAGGTCTGGTGGCACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTCCAGCAGACACAGATATGGGTTAGGTCTGGTGGCACCTG  50

seq1  CCTTTAAACTAAGCACTTGCAGGCAGAGGCAGAGATATATCTGTATGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAACTAAGCACTTGCAGGCAGAGGCAGAGATATATCTGTATGATT  100

seq1  AAGGCCAGTCTGATCCACATGGCAAGTTCCAGACCAAAGAATAGAACATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGTCTGATCCACATGGCAAGTTCCAGACCAAAGAATAGAACATG  150

seq1  ATACGCCCATGTCTCTAAGAGCGTTGGGTTTGTGCGAAATCAAAAAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGCCCATGTCTCTAAGAGCGTTGGGTTTGTGCGAAATCAAAAAAAGT  200

seq1  GGATCTTAAATTCTAGCAGCTATAGGGGACTTTCGGGATAGCACTTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTAAATTCTAGCAGCTATAGGGGACTTTCGGGATAGCACTTGAAA  250

seq1  TGTAAATGAAGAAACTATCTAAAAAATTTTTTTTAAAAAGATAGAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAAGAAACTATCTAAAAAATTTTTTTTAAAAAGATAGAAAAAC  300

seq1  AGCCTTATTCAAGAGGGTATTTGTTCACCCATTTTTTTAAATAAAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTATTCAAGAGGGTATTTGTTCACCCATTTTTTTAAATAAAATATA  350

seq1  ATCTTAATACATACAGGTTATAAATTAAAATCATTTTCCTTTTTTTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAATACATACAGGTTATAAATTAAAATCATTTTCCTTTTTTTCATT  400

seq1  AAAAAATATTGTAATGTCTAGTGACTACTTGAGTCAGTGATCTTCAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATTGTAATGTCTAGTGACTACTTGAGTCAGTGATCTTCAGTTC  450

seq1  TCACAAGAAATCTCATCTCAAACAGTAACAGGAAGACTAATCAAGATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGAAATCTCATCTCAAACAGTAACAGGAAGACTAATCAAGATAGA  500

seq1  CATTCAATCTTGACCTCTTGTATCTTTATGCTGACTCTTACATGTACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATCTTGACCTCTTGTATCTTTATGCTGACTCTTACATGTACAGT  550

seq1  CAGACACACAGACACACAGACACATGCACACACAGACACACACACACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACACAGACACACAGACACATGCACACACAGACACACACACACCCA  600

seq1  TCTACGAAAAGAAGCTTCTGTCTAAAGGAAATATGGAGACAAATAGTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACGAAAAGAAGCTTCTGTCTAAAGGAAATATGGAGACAAATAGTGGA  650

seq1  ATGGAGACTGAAGGAAAGACCATCCAGAGACTGCCCCACCTGGGGATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACTGAAGGAAAGACCATCCAGAGACTGCCCCACCTGGGGATCCA  700

seq1  TCCCATATACAGACACCAAACCCAGACACTGTTGCTGAAGCCAAGAATTG  750
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCCCATATACAGACACCAAACCCAGACACTATTGCTGAAGCCAAGAATTG  750

seq1  CTTGCTGGCAGGTGCCTGATACAGCTGTTTCCTGAGAGTCTTTGCCAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGCAGGTGCCTGATACAGCTGTTTCCTGAGAGTCTTTGCCAGAT  800

seq1  CCTACCCAATACAGATGTGGATGCTCGCAGCCAACCATCAAACTGAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCAATACAGATGTGGATGCTCGCAGCCAACCATCAAACTGAGCAC  850

seq1  CAGGGACCCAATGGAGGATAGGAGAAAGACTGAAGAAGCTGAAGGAGCCT  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGGGACCCAATGGAGGATAGGAG-AAGACTGAAGAAGCTGAAGGAGCCT  899

seq1  TATCTGGCATCAATGAGAGGAGAGGGCCTTGGTCCTGTGAAGGCTTGATG  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATCTGGCATCAATGAGAGGAGA-GGCCTTGGTCCTGTGAAGGCTTGATG  948

seq1  CTCCAGTGTAGAGGAATGCTAGGATGGAGAGGCAAAAGTGGGTGGATGGA  1000
      ||||||||||||||||||||| |||||||||    |||||||| ||| ||
seq2  CTCCAGTGTAGAGGAATGCTA-GATGGAGAG---CAAGTGGGT-GAT-GA  992

seq1  TGGGGGAGCAGCCTCAT  1017
      | ||||||||  |||||
seq2  T-GGGGAGCA--CTCAT  1006


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