BAC Information

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BAC

Clone NameB6Ng01-009B01
Chromosome2 (Build37)
Map Location 121,214,897 - 121,215,926
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem87a, Ganc, Capn3, Zfp106, Snap23, Lrrc57, Cep27, Stard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc
Downstream geneCatsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76, Frmd5, Casc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord, Duox2, Duoxa2, Duoxa1, Duox1, Shf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009B01.bB6Ng01-009B01.g
ACCDH845112DH845113
length1,0281,190
definitionDH845112|Mus musculus domesticus DNA, BAC clone: B6Ng01-009B01, 5' end.DH845113|Mus musculus domesticus DNA, BAC clone: B6Ng01-009B01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctgtagaccaggctggccttgaactcagaaatctgcctgcc
tctgcctcccaagtgctgggattaaaggtgtgcgccaccactgcccggcc
agattttttttttaattaaaaaatgtttatgtagtatggggtgacattaa
cataccacagtgtatctgtggtggtcagaggaaaacttgcaggaatgact
tttttctttctactgtgtcagtcctggggactaaattcaggttatcaggc
ttgatgtcagtctttgccaactgagccattttaccagctctctcttaatt
gtttgagacagggccatatgtagctcagcttagcttcaaactagctacat
agccaaggttgtctttgaacttttgctcctccttcttcacctcccaagtg
ctgggattgcatgtctataccactatgcctggcttatctctgatttagat
attttatagatatgtgaattatagatagttatggtcatcaaactaaaagt
gatgggaaggaacatagaattcagatatatatcaaaatacaaacatggat
atataatattatatatatggttttttgagacagggtttctctgtgtagcc
ttggcgtccctggaactcaccaggctggactcaaaatcttaagatccatc
tgcctctgcctctgcctctgcctcctgtgtgctgggattaaaggtatggt
atcactaccacctggcatgcgcatatacatacatatatatacatatatat
tatatatatttgaaaaaataatatttattccagcctttaaaggctgggag
aagctgaggaggagggtgaccccaaccccatagggaagaccagctaacta
accaggacccctaagatctctcagacactgagccattaaccaggtagcat
acactgcctgatatgaggcccgcatcacatatacagcagaggactgtctg
gtctgtctcattgagagaagatgcatcaactttgatagacttgaggctca
ggagtggggaggtctgatggggtggggg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
attcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacataatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggacccagatgtagctatctcttgtgagactatgccggggtctagcaaca
cagaagtggatgctcacagtcagctaatgggatggatcacagggctccca
atggaggagctagagaaaagaatccaaggagctaaagggatctgcaaccc
ttataggttggaacacattataaacctaatcagtactccaaagttcttga
ctcttagctgcattatgtatcaaaagatgccctaagtgggcttctatgta
aagagtagttctatggatcttgtaactttgtatggcctcagttacagggg
atcgtccgagtcccaaacgcagattgtgttgttatggtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_121214897_121215926
seq2: B6Ng01-009B01.b_46_1073 (reverse)

seq1  CCCCCACCCCATCAGACCTCCCCACTCCCTGAGGCCTCAAGTCTCTCAAA  50
      |||||||||||||||||||||||||| ||||| ||||||||||| |||||
seq2  CCCCCACCCCATCAGACCTCCCCACT-CCTGA-GCCTCAAGTCTATCAAA  48

seq1  GTTTGATGCATCTTCTCTCATTGAGGCCAGACCAGGCAGTCCTCTGCTGT  100
      | |||||||||||||||||| ||| | |||||||| ||||||||||||||
seq2  G-TTGATGCATCTTCTCTCAATGA-GACAGACCAGACAGTCCTCTGCTGT  96

seq1  ATATGTGTTGCGGGCCTCATATCAGGCAGTGTATGCTACCTGGTTAATGG  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGATGCGGGCCTCATATCAGGCAGTGTATGCTACCTGGTTAATGG  146

seq1  CTCAGTGTCTGAGAGATCTTAGGGGTCCTGGTTAGTTAGCTGGTCTT-CC  199
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCAGTGTCTGAGAGATCTTAGGGGTCCTGGTTAGTTAGCTGGTCTTCCC  196

seq1  TATGGGGTTGGGGTCACCCTCCTCCTCAGCTTCTCCCAGCCTTT-AAGGC  248
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATGGGGTTGGGGTCACCCTCCTCCTCAGCTTCTCCCAGCCTTTAAAGGC  246

seq1  TGGAATAAATATTATTTTTTCAAATATATATAATATATATGTATATATAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAAATATTATTTTTTCAAATATATATAATATATATGTATATATAT  296

seq1  GTATGTATATGCGCATGCCAGGTGGTAGTGATACCATACCTTTAATCCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATATGCGCATGCCAGGTGGTAGTGATACCATACCTTTAATCCCA  346

seq1  GCACACAGGAGGCAGAGGCAGAGGCAGAGGCAGATGGATCTTAAGATTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGGAGGCAGAGGCAGAGGCAGAGGCAGATGGATCTTAAGATTTT  396

seq1  GAGTCCAGCCTGGTGAGTTCCAGGGACGCCAAGGCTACACAGAGAAACCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCAGCCTGGTGAGTTCCAGGGACGCCAAGGCTACACAGAGAAACCC  446

seq1  TGTCTCAAAAAACCATATATATAATATTATATATCCATGTTTGTATTTTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAAAAACCATATATATAATATTATATATCCATGTTTGTATTTTG  496

seq1  ATATATATCTGAATTCTATGTTCCTTCCCATCACTTTTAGTTTGATGACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCTGAATTCTATGTTCCTTCCCATCACTTTTAGTTTGATGACC  546

seq1  ATAACTATCTATAATTCACATATCTATAAAATATCTAAATCAGAGATAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTATCTATAATTCACATATCTATAAAATATCTAAATCAGAGATAAG  596

seq1  CCAGGCATAGTGGTATAGACATGCAATCCCAGCACTTGGGAGGTGAAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCATAGTGGTATAGACATGCAATCCCAGCACTTGGGAGGTGAAGAA  646

seq1  GGAGGAGCAAAAGTTCAAAGACAACCTTGGCTATGTAGCTAGTTTGAAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGCAAAAGTTCAAAGACAACCTTGGCTATGTAGCTAGTTTGAAGC  696

seq1  TAAGCTGAGCTACATATGGCCCTGTCTCAAACAATTAAGAGAGAGCTGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGAGCTACATATGGCCCTGTCTCAAACAATTAAGAGAGAGCTGGT  746

seq1  AAAATGGCTCAGTTGGCAAAGACTGACATCAAGCCTGATAACCTGAATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCTCAGTTGGCAAAGACTGACATCAAGCCTGATAACCTGAATTT  796

seq1  AGTCCCCAGGACTGACACAGTAGAAAGAAAAAAGTCATTCCTGCAAGTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCAGGACTGACACAGTAGAAAGAAAAAAGTCATTCCTGCAAGTTT  846

seq1  TCCTCTGACCACCACAGATACACTGTGGTATGTTAATGTCACCCCATACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGACCACCACAGATACACTGTGGTATGTTAATGTCACCCCATACT  896

seq1  ACATAAACATTTTTTAATTAAAAAAAAAATCTGGCCGGGCAGTGGTGGCG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACATTTTTTAATTAAAAAAAAAATCTGGCCGGGCAGTGGTGGCG  946

seq1  CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAG  996

seq1  TTCAAGGCCAGCCTGGTCTACAGAGTGAATTC  1030
      ||||||||||||||||||||||||||||||||
seq2  TTCAAGGCCAGCCTGGTCTACAGAGTGAATTC  1028