BAC Information

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BAC

Clone NameB6Ng01-010B24
Chromosome2 (Build37)
Map Location 128,560,959 - 128,561,955
singlet/doubletsinglet
Overlap geneMertk
Upstream geneNphp1, 1500011K16Rik, Bub1, Acoxl, Bcl2l11, LOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1
Downstream geneTmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466, Ckap2l, Il1a, Il1b, OTTMUSG00000015529, LOC668896, F830045P16Rik, Sirpa, Pdyn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010B24.bB6Ng01-010B24.g
ACCDH845887DH845888
length1361,005
definitionDH845887|Mus musculus domesticus DNA, BAC clone: B6Ng01-010B24, 5' end.DH845888|Mus musculus domesticus DNA, BAC clone: B6Ng01-010B24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caggaatcttgggaaattgttacatttacttcggtattcactaattcttc
aatctcaatggcatctaatggtaattttaactttgggctcctatcttata
tagcagtttgctaaaatatggggtggggggtgggga
gaattcactgaccctttccctctctttctctagtgtgtgctcgagagtac
atacgcatgcgggggcgcgcgcgcgcgcgcgcacacacacacacacacac
acacacacacacggttgctcttgcactcacatctcttgctttcatccatc
tttgaatctctaatacacgtactatcaggtgtcttgcttaccatggcggc
ttctaaaccatggctttggttattctccttctggagagttttggaaatct
gaggagtttttggttgtcattacaattatggaattccatagatctcaaga
tcctgagcaattgttctatatcccaaatggccttgaaactaggtcctgct
tctaccttgcctggtctctaagtattgtgcagaatattcacctgactgcc
taaaattgcaactgtgaaaacagagggccggtatcctcttgtctggtttg
gaattttttggtgtccgagttatcttttctgttttagatttattctccct
ccaccccccaccccgtgtatgctcacatgtatgctcacatgtatgctcac
atgtgtacagatgccagaagaggctgctgacaccacggagctgggctttc
aggtggttgtgggttacctagcatgagtgctgagaaccaaacttggtgct
cttaaccagagcctgtccagccccacctaaaccgtcactctggaaggcaa
gcatcactgcctttacctcagacacctattctgtgctcaggtggtggtga
gttggggagggaggcacagactggggacatggggactgtctccttttttc
ctttctgctggggatggtcaggcccagcactagtacattagaaatgtgtc
ttttgttaattgtaatcttagctttgctttgcttatgtccagctggaacg
cctaggaaaatggtaccatcccaactgtcacaggcctgtgacctgtggtc
tcaccctctgaggaggaggctgtggggtatttgatgtgagcctgtatgaa
gtaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_128560959_128561955
seq2: B6Ng01-010B24.g_64_1068 (reverse)

seq1  TGTACTTCAT-CATGCTCACCTCAAA---CCCACAGCCCTCCTGCCTCAG  46
      |||||||||| || |||||| |||||   ||||||| |||||| ||||||
seq2  TGTACTTCATACAGGCTCACATCAAATACCCCACAG-CCTCCT-CCTCAG  48

seq1  AGGGCTGAGACCACAGG-CACAGGCCTGTGCCAGCTGGGTTGG--ACATT  93
      |||| |||||||||||| |||||||||||| ||| |||| |||   ||||
seq2  AGGG-TGAGACCACAGGTCACAGGCCTGTGACAGTTGGGATGGTACCATT  97

seq1  TTCC-AGGCGTTCCAGCTGGAACATAAGCAAAGCAAAGCTAAGATAACTA  142
      |||| ||||||||||||||| |||||||||||||||||||||||| || |
seq2  TTCCTAGGCGTTCCAGCTGG-ACATAAGCAAAGCAAAGCTAAGATTACAA  146

seq1  ATAACAAAAGACACATTTCT-ATGTACTAGTGCT-GGCCTGACCAT-CCC  189
       ||||||||||||||||||| ||||||||||||| ||||||||||| |||
seq2  TTAACAAAAGACACATTTCTAATGTACTAGTGCTGGGCCTGACCATCCCC  196

seq1  AGCAGAAAGGAAAAAAGGAGACAGT-CCCATGTCCCCAGTCTGTGCCTCC  238
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCAGAAAGGAAAAAAGGAGACAGTCCCCATGTCCCCAGTCTGTGCCTCC  246

seq1  CTCCCCAACTCACCACCACCTGAGCACAGAATAGGTGTCTGAGGTAAAGG  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAACTCACCACCACCTGAGCACAGAATAGGTGTCTGAGGTAAAGG  296

seq1  CAGTGATGCTTGCCTTCCAGAGTGACGGTTTAGGTGGGGCTGGACAGGCT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGCTTGCCTTCCAGAGTGACGGTTTAGGTGGGGCTGGACAGGCT  346

seq1  CTGGTTAAGAGCACCAAGTTTGGTTCTCAGCACTCATGCTAGGTAACCCA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAAGAGCACCAAGTTTGGTTCTCAGCACTCATGCTAGGTAACCCA  396

seq1  CAACCACCTGAAAGCCCAGCTCCGTGGTGTCAGCAGCCTCTTCTGGCATC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACCTGAAAGCCCAGCTCCGTGGTGTCAGCAGCCTCTTCTGGCATC  446

seq1  TGTACACATGTGAGCATACATGTGAGCATACATGTGAGCATACACGGGGT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACATGTGAGCATACATGTGAGCATACATGTGAGCATACACGGGGT  496

seq1  GGGGGGTGGAGGGAGAATAAATCTAAAACAGAAAAGATAACTCGGACACC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTGGAGGGAGAATAAATCTAAAACAGAAAAGATAACTCGGACACC  546

seq1  AAAAAATTCCAAACCAGACAAGAGGATACCGGCCCTCTGTTTTCACAGTT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTCCAAACCAGACAAGAGGATACCGGCCCTCTGTTTTCACAGTT  596

seq1  GCAATTTTAGGCAGTCAGGTGAATATTCTGCACAATACTTAGAGACCAGG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTTAGGCAGTCAGGTGAATATTCTGCACAATACTTAGAGACCAGG  646

seq1  CAAGGTAGAAGCAGGACCTAGTTTCAAGGCCATTTGGGATATAGAACAAT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAGAAGCAGGACCTAGTTTCAAGGCCATTTGGGATATAGAACAAT  696

seq1  TGCTCAGGATCTTGAGATCTATGGAATTCCATAATTGTAATGACAACCAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGATCTTGAGATCTATGGAATTCCATAATTGTAATGACAACCAA  746

seq1  AAACTCCTCAGATTTCCAAAACTCTCCAGAAGGAGAATAACCAAAGCCAT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCTCAGATTTCCAAAACTCTCCAGAAGGAGAATAACCAAAGCCAT  796

seq1  GGTTTAGAAGCCGCCATGGTAAGCAAGACACCTGATAGTACGTGTATTAG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGAAGCCGCCATGGTAAGCAAGACACCTGATAGTACGTGTATTAG  846

seq1  AGATTCAAAGATGGATGAAAGCAAGAGATGTGAGTGCAAGAGCAACCGTG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAAAGATGGATGAAAGCAAGAGATGTGAGTGCAAGAGCAACCGTG  896

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCGCCCCCG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCGCCCCCG  946

seq1  CATGCGTATGTACTCTCGAGCACACACTAGAGAAAGAGAGGGAAAGGGTC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGTATGTACTCTCGAGCACACACTAGAGAAAGAGAGGGAAAGGGTC  996

seq1  AGTGAATTC  997
      |||||||||
seq2  AGTGAATTC  1005