BAC Information

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BAC

Clone NameB6Ng01-012M24
Chromosome2 (Build37)
Map Location 176,547,695 - 176,548,581
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039000, LOC100043126, LOC100039017, LOC100039036, LOC100039049, LOC626832, OTTMUSG00000016203, LOC100039060, LOC668030, LOC627914, LOC100039093, LOC668039, LOC100039109, LOC100043381, LOC100043387
Downstream geneLOC100039123, LOC626877, LOC100039156, LOC100039166, 6230416C02Rik, LOC635470, LOC100043403, LOC100039198, LOC100043406, LOC668066, LOC621442, LOC628308, OTTMUSG00000016571, LOC100039233, LOC626802
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012M24.bB6Ng01-012M24.g
ACCDH847795DH847796
length1,154924
definitionDH847795|Mus musculus domesticus DNA, BAC clone: B6Ng01-012M24, 5' end.DH847796|Mus musculus domesticus DNA, BAC clone: B6Ng01-012M24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggttgagaagcacctgaaaaaatg
ttcagtatccttaatcatcagggaaattcaaatcaaaacaaccctgagat
tccatctcacaccagtcagtatgaataagatcaaaaattcaggtaacagc
agatgctggtgaggatgtggagaaagagggacattccttcattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctgatggttcctca
gaaaattggacatagtactactggaggatccagtaatatgtctcctgggc
atatacccagatattccaactggtaataagaacacatgctcctctatgtt
cctagcagccttatttataatagccagaagctggagagaacccagatgtc
cctcaacagaggaatgtataccaaaaatgtggtacatttacacaatggag
tactattcagctattaaaagctatgaatttattaaattcctaggcaaatg
gatggatctggagaatatcatcctgagtgagttgacccaatgacaagaga
actcatatgatatgcattcagggataagtggatagtagcccagaaactta
gaatacctaagatacaatttgcaaaacacatgaaactcaagaagaaggaa
gaccaaagtgtggacacttcaccccttcttagaattgggaacaaaacacc
catggaaggagttacagagacaaagtttggagctgagacaaaaggatgga
ccatctagagactgccccacactgaggtccatcccataatcagcctccaa
acacagacactattgcatatgccagtaagtatttgctgaaaggactgtga
tatagctgtctctcgtgagtctatgccagtgccaggcaaacacagaagtg
gatgctcacagtcaactattggatggaacacaggtccccagtggggagct
agtgaaagtacccaaggagctgagggttctgcaactctataggtggacac
atatgactaaccatacccctgagctagtatctctagctgcacatgtagca
gaagattgctattcggcatcatggaagagaggcagccttgtctgcaattt
atgctcaatacagggaacactaggtcagaacatggaatggtggtatgggg
aact
gaattcttagcagatttgctggtttggcttagccatctggtttgtcacca
ggctgtgcaggttcacaaccaaaagaaaagttgagctgaattggtaggca
taattcctgggttcatggaatgagttgggactcagcaaaatccccaaggc
tgatccaaacatccttcttggactggttttaccatgggcccttctcaaag
atttctgtctgtctcagatagtttgagattagaggtgcagtacaaagata
cattctggtcagaaacagacagaggtagatggtagagactgcccagagct
ataatcagaaaaaagaattgagagaaatcgatgaaattttttaaattgct
tttaaggataaatgagacagtggtaattgtttaagagtgtctgtggaggg
ccctaatgtctccagaggactctccacacggctggcacaccagcacaccc
aggttcttgaaatcactggtgagtggaaagctacatcagttcgaaaaaat
ccagatgtgggaagccacatgtgcctttgcaggccacatgtgccattgca
gggtaaccgctggctaccatgcatacgtaggcagtaaagtttttttgcca
agatgaggttttgagaattaaccaatcagatgagagagaagctaaccaat
cagatgtgagacatgcaaatgaggtggtaagcataacccatgcataacca
atctgggtgtgagacacgcctctcctaggcctatataagcagcaccagtt
ctgggcttggagtctcttcacctctgcaatcaagctctcccaataaagtg
tacagaaggatcctgttgcagcatcattcttgctggccagtcgggcacgc
acaagatccagagggtcttgtgctagcagatagtgacaaaggacagcacc
cgaccagcggctggggttactttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_176547695_176548581
seq2: B6Ng01-012M24.g_66_950

seq1  GAATTCTTAGCAGATTTGCTGGTTTGGCTTAGCCATCTGGTTTGTCACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCAGATTTGCTGGTTTGGCTTAGCCATCTGGTTTGTCACCA  50

seq1  GGCTGTGCAGGTTCACAACCAAAAGAAAAGTTGAGCTGAATTGGTAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGCAGGTTCACAACCAAAAGAAAAGTTGAGCTGAATTGGTAGGCA  100

seq1  TAATTCCTGGGTTCATGGAATGAGTTGGGACTCAGCAAAATCCCCAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCTGGGTTCATGGAATGAGTTGGGACTCAGCAAAATCCCCAAGGC  150

seq1  TGATCCAAACATCCTTCTTGGACTGGTTTTACCATGGGCCCTTCTCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCAAACATCCTTCTTGGACTGGTTTTACCATGGGCCCTTCTCAAAG  200

seq1  ATTTCTGTCTGTCTCAGATAGTTTGAGATTAGAGGTGCAGTACAAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTCTGTCTCAGATAGTTTGAGATTAGAGGTGCAGTACAAAGATA  250

seq1  CATTCTGGTCAGAAACAGACAGAGGTAGATGGTAGAGACTGCCCAGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGTCAGAAACAGACAGAGGTAGATGGTAGAGACTGCCCAGAGCT  300

seq1  ATAATCAGAAAAAAGAATTGAGAGAAATCGATGAAATTTTTTAAATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAGAAAAAAGAATTGAGAGAAATCGATGAAATTTTTTAAATTGCT  350

seq1  TTTAAGGATAAATGAGACAGTGGTAATTGTTTAAGAGTGTCTGTGGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGATAAATGAGACAGTGGTAATTGTTTAAGAGTGTCTGTGGAGGG  400

seq1  CCCTAATGTCTCCAGAGGACTCTCCACACGGCTGGCACACCAGCACACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATGTCTCCAGAGGACTCTCCACACGGCTGGCACACCAGCACACCC  450

seq1  AGGTTCTTGAAATCACTGGTGAGTGGAAAGCTACATCAGTTCGAAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTTGAAATCACTGGTGAGTGGAAAGCTACATCAGTTCGAAAAAAT  500

seq1  CCAGATGTGGGAAGCCACATGTGCCTTTGCAGGCCACATGTGCCATTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTGGGAAGCCACATGTGCCTTTGCAGGCCACATGTGCCATTGCA  550

seq1  GGGTAACCGCTGGCTACCATGCATACGTAGGCAGTAAAGTTTTTTTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAACCGCTGGCTACCATGCATACGTAGGCAGTAAAGTTTTTTTGCCA  600

seq1  AGATGAGGTTTTGAGAATTAACCAATCAGATGAGAGAGAAGCTAACCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGTTTTGAGAATTAACCAATCAGATGAGAGAGAAGCTAACCAAT  650

seq1  CAGATGTGAGACATGCAAATGAGGTGGTAAGCATAACCCATGCATAACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGAGACATGCAAATGAGGTGGTAAGCATAACCCATGCATAACCA  700

seq1  ATCTGGGTGTGAGACACGCCTCTCCTAGGCCTATATAAGCAGCACCAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGTGTGAGACACGCCTCTCCTAGGCCTATATAAGCAGCACCAGTT  750

seq1  CTGGGCTTGGAGTCTCTTCACCTCTGCAATCAAGCTCTCCCAATAAAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTTGGAGTCTCTTCACCTCTGCAATCAAGCTCTCCCAATAAAGTG  800

seq1  TACAGAAGGATCCTGTTGCAGCATCATTCTTGCTGGCCAGTCGGGCACGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGGATCCTGTTGCAGCATCATTCTTGCTGGCCAGTCGGGCACGC  850

seq1  ACAAGATCCAGAGGGTCTTGTGCTAGCAGGAATAGTG  887
      |||||||||||||||||||||||||||||  ||||||
seq2  ACAAGATCCAGAGGGTCTTGTGCTAGCAG--ATAGTG  885