BAC Information

Click to search

BAC

Clone NameB6Ng01-014D04
Chromosome2 (Build37)
Map Location 42,703,608 - 42,704,689
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC625094
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014D04.bB6Ng01-014D04.g
ACCDH848810DH848811
length1,1441,056
definitionDH848810|Mus musculus domesticus DNA, BAC clone: B6Ng01-014D04, 5' end.DH848811|Mus musculus domesticus DNA, BAC clone: B6Ng01-014D04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccaggaatccaccccataatc
agcatccaaacgctgacaccattgtatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggaggagctagagaagtacccagagctaaaggatctcaccctataggtg
acacattatgactacagtaccctgagctctgactctagctgcatttgttt
caaagatgctagtcgccatcctgcaagaagcccatgaccgcgactttgtg
tgctcgttacaggaacgcagcaaggggtgaattggtgtgtgcta
gaattctaggaccctgagctcacccaagtggtgtaaacaagtagcagtcc
actacactacataccaggatgtaccaggatgacatggtatcttggaaagc
aagcttagatatggacttctggcttggcctctatactaccgacctctgct
tgtgaacaatgtggcattctcaactctttctccatgttcacctcagttat
taccatccaaggaccactaatacaacttggcacattctctactactttct
aaagattgacattgagaatcttttaagcttatagaaggtttgctctttgg
ctcagaattgtacctccctataggttggctaatatgagttctgacactgt
attcacacattatattcttatgctgatactgaacccccagcatcacaacc
tgactaataagggtaaaaggaaacaaagatttaaatatccatttaacaat
atgagcgcagctatctctatcaagaaacactatgaaaatcctaattacag
gtgtcaaggtcccattataagagcacaaacatacaaaaagaaaatatatt
ttcttgaaaaattagtaccttattgtaatgttctctgagagaatttactt
agttgattcacagacaaagatttcaaaagaacaattacaaataatgctga
aataattaaaaaaggacatgtctaaattgctgaatgaagttcatgcaaac
aatagttgaatgaaattataaaaacaattcaagctatgagtagaattcaa
gaaaggttaatgtataatgaagaatcatagtgaaataaaacttcaaatta
agaactcagaaagcacaccaaaagtcagagaaagacccaagtgtaagaga
gatagcaggtctcataaacaagtagaggagagactgccctcctcccttgt
gcaagatcagaagcatgctcactgcatgtctgccatcatgcatgactatg
atgtgcatgtgagtctgctcatgtgctacatgtctgttcatgctctgcag
cagcaagtttgtattattcttgtgatgatcaggatcagcagttggctttt
ctgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42703608_42704689
seq2: B6Ng01-014D04.g_67_1122

seq1  GAATTCTAGGACCCTGAGCTCACCCAAGTGGTGTAAACAAGTAGCAGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGACCCTGAGCTCACCCAAGTGGTGTAAACAAGTAGCAGTCC  50

seq1  ACTACACTACATACCAGGATGTACCAGGATGACATGGTATCTTGGAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACTACATACCAGGATGTACCAGGATGACATGGTATCTTGGAAAGC  100

seq1  AAGCTTAGATATGGACTTCTGGCTTGGCCTCTATACTACCGACCTCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAGATATGGACTTCTGGCTTGGCCTCTATACTACCGACCTCTGCT  150

seq1  TGTGAACAATGTGGCATTCTCAACTCTTTCTCCATGTTCACCTCAGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACAATGTGGCATTCTCAACTCTTTCTCCATGTTCACCTCAGTTAT  200

seq1  TACCATCCAAGGACCACTAATACAACTTGGCACATTCTCTACTACTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCCAAGGACCACTAATACAACTTGGCACATTCTCTACTACTTTCT  250

seq1  AAAGATTGACATTGAGAATCTTTTAAGCTTATAGAAGGTTTGCTCTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTGACATTGAGAATCTTTTAAGCTTATAGAAGGTTTGCTCTTTGG  300

seq1  CTCAGAATTGTACCTCCCTATAGGTTGGCTAATATGAGTTCTGACACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATTGTACCTCCCTATAGGTTGGCTAATATGAGTTCTGACACTGT  350

seq1  ATTCACACATTATATTCTTATGCTGATACTGAACCCCCAGCATCACAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACATTATATTCTTATGCTGATACTGAACCCCCAGCATCACAACC  400

seq1  TGACTAATAAGGGTAAAAGGAAACAAAGATTTAAATATCCATTTAACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAATAAGGGTAAAAGGAAACAAAGATTTAAATATCCATTTAACAAT  450

seq1  ATGAGCGCAGCTATCTCTATCAAGAAACACTATGAAAATCCTAATTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCGCAGCTATCTCTATCAAGAAACACTATGAAAATCCTAATTACAG  500

seq1  GTGTCAAGGTCCCATTATAAGAGCACAAACATACAAAAAGAAAATATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAGGTCCCATTATAAGAGCACAAACATACAAAAAGAAAATATATT  550

seq1  TTCTTGAAAAATTAGTACCTTATTGTAATGTTCTCTGAGAGAATTTACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAAAAATTAGTACCTTATTGTAATGTTCTCTGAGAGAATTTACTT  600

seq1  AGTTGATTCACAGACAAAGATTTCAAAAGAACAATTACAAATAATGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATTCACAGACAAAGATTTCAAAAGAACAATTACAAATAATGCTGA  650

seq1  AATAATTAAAAAAGGACATGTCTAAATTGCTGAATGAAGTTCATGCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAAAAAAGGACATGTCTAAATTGCTGAATGAAGTTCATGCAAAC  700

seq1  AATAGTTGAATGAAATTATAAAAACAATTCAAGCTATGAGTAGAATTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTGAATGAAATTATAAAAACAATTCAAGCTATGAGTAGAATTCAA  750

seq1  G-AAGGTTAATGTATAATGAAGAATCATAGTGAAATAAAACTTCAAATTA  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTTAATGTATAATGAAGAATCATAGTGAAATAAAACTTCAAATTA  800

seq1  AGAACTCAGGAAAGCACACCAAAAAGTCAGAGAAAGACCCAAGTGTAAGA  849
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  AGAACTCA-GAAAGCACACC-AAAAGTCAGAGAAAGACCCAAGTGTAAGA  848

seq1  GAGATAGCAGGTCTCATAAACAAGGTAGAGGAGAGAACTGCCCTCCTCCC  899
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  GAGATAGCAGGTCTCATAAACAA-GTAGAGGAGAG-ACTGCCCTCCTCCC  896

seq1  TTGTGCAAAAGATCCAGAAGCATGCTCACTGCATGGTCTGCCCATCATTG  949
      ||||||  ||||| |||||||||||||||||||| ||||| |||||||  
seq2  TTGTGC--AAGAT-CAGAAGCATGCTCACTGCAT-GTCTG-CCATCAT--  939

seq1  GCATGACTATGATGTGCCATGGTGAAGTCCTGGCTCATGTGGCTACATGT  999
      |||||||||||||||| ||| ||| ||||   |||||||| |||||||||
seq2  GCATGACTATGATGTG-CAT-GTG-AGTC--TGCTCATGT-GCTACATGT  983

seq1  CTGTATCCATGGCTCTGCAGCAGCAGAGGTCTGTATTTATTCTTGTGATG  1049
      |||  | ||| |||||||||||||  | || |||| ||||||||||||||
seq2  CTG--TTCAT-GCTCTGCAGCAGC--AAGTTTGTA-TTATTCTTGTGATG  1027

seq1  ATCAAAGATCAAGCAGTTTGCCTTTTTCTGGGC  1082
      ||| | |||| ||||||| ||  ||||||||||
seq2  ATC-AGGATC-AGCAGTTGGC--TTTTCTGGGC  1056