BAC Information

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BAC

Clone NameB6Ng01-014K12
Chromosome2 (Build37)19 (Build37)
Map Location 142,776,378 - 142,777,05860,984,979 - 60,985,912
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014K12.bB6Ng01-014K12.g
ACCDH849137DH849138
length866931
definitionDH849137|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K12, 5' end.DH849138|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,378 - 142,777,058)(60,984,979 - 60,985,912)
sequence
gaattctgtcaaagtatacagagtttgatgtacaaagccattcattcttt
ggggaaggttgcaaaaaaacataggactatgggctaggtatacagtcagc
atagatttagaaggtgtagtctgtgatctcagaacaggaggggagaaagg
gggaaggagggaagacggtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataagtatggatcgattcg
cattcttctacacgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggtttatttctgggtcttcaattctattccattg
ggctatttgtctgtctctataccagtaccatgcactttttatcacaattg
ctctgtaataaagctttcggtctggcatggttgattccgccagaagttct
tttatcctttgagaagacttttttgctatcctaggttttttgttattcca
gacaaattttgcaaaattgctcctttccaattcgttgaagaattgagttg
gaattttgatggggattgcattgaatctgtagattgctttggcaagatag
ccatttttacaatgttgatcctgccatcccatgagcatgggaaatctttc
catcttcggagacttc
gaattcactatgtagaccatgccggcttcaaactaagagatcctcctgcc
tctgcttcttgagtgctggaattaaagttgccatggcttttcaacacagc
cctggttgtcctagaactcactatgtagtccagatgtgtctgcttctggg
gttaaagacatgtaccatgcccactgaacagctatctctgtagcccccac
atggcattttttaatccagtcaagttgacagtgggaattaatcatcataa
ggactaaagccagagcccctgtccccagatatccaggctgtggttttatt
ggaaaccactgttcattaataggtactttcatcttaggaccacaatctgc
tggcagtgggaatggtggtgtctggcaagctcaaggatgtgggggtttaa
taacttgacataagtgggctctagacacccactgtttttctttttgaggt
aacttggtatttttttcctgttaaatatactcagctaatatatttcaatt
cccactgaaagtattattgatggctctgtgaaaatttgaataagggaaaa
tgtgctaccggcatgttgtgtggccataggctcacggcttcagttctctg
agccaaacttttcccagttctataaatgtacaggtcagacctggtggtct
cttggactcatttcagtctttcagtcttgagatttggtagttcaaattta
ctgtgggcacttatagtaatatttttattaaattttaagacatttattat
tttttatgaaacatttattttatgtatgtctgccctggtgttttgcctgg
atgtatgtcggaagaggccataggaacatgttatatcctatggggctcga
gttacagatagatttgaactgccaatgggtgctgagaatgaaactgatca
tccacaacagccactgatcttagcactgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776378_142777058
seq2: B6Ng01-014K12.b_222_906 (reverse)

seq1  GAAGATCTCAGAAGATGGAAGGATCTCCCATGCTCATGGATTGGCAGGAT  50
      |||| |||| |||||||||| ||| ||||||||||||||  |||||||||
seq2  GAAG-TCTCCGAAGATGGAAAGATTTCCCATGCTCATGGGATGGCAGGAT  49

seq1  CAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATG  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAACATTGTAAAAATGGCTATCTTGCC-AAAGCAATCTACAGATTCAATG  98

seq1  CAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAG-AAGGAGC  149
      |||||||||||||||||||||||||||||||||||||||| | |||||||
seq2  CAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTGGAAAGGAGC  148

seq1  AA-TTTGC-AAATTCATCTGGAATAACAAAAAACCTAGGATAGC-AAAAA  196
      || ||||| |||||  |||||||||||||||||||||||||||| |||||
seq2  AATTTTGCAAAATTTGTCTGGAATAACAAAAAACCTAGGATAGCAAAAAA  198

seq1  GTCTTCTC-AAGGATAAAAGAACCTCTGGTGGAATC-ACCATGCCTGACC  244
      |||||||| |||||||||||||| ||||| |||||| |||||||| ||||
seq2  GTCTTCTCAAAGGATAAAAGAACTTCTGGCGGAATCAACCATGCCAGACC  248

seq1  TAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTAT  294
       ||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  GAAAGCTTTATTACAGAGCAATTGTGATAAAAAGTGCATGGTACTGGTAT  298

seq1  AGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAA  344
      |||||||||||| ||| |||||||||||||||||||||||||||||| ||
seq2  AGAGACAGACAAATAGCCCAATGGAATAGAATTGAAGACCCAGAAATAAA  348

seq1  CCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCC  398

seq1  AGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTG  444
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTG  448

seq1  TTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAA  494
      ||||| |||||||||||| |||||||||||||||||||||||||||||||
seq2  TTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAA  498

seq1  GGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGA  548

seq1  AACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGG  598

seq1  GACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAAT  644
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAAT  648

seq1  TGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGC  681
      |||||||||||||||||||||||||||||||||||||
seq2  TGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGC  685

seq1: chr19_60984979_60985912
seq2: B6Ng01-014K12.g_66_996

seq1  GAATTCACTATGTAGACCATGCCGGCTTCAAACTAAGAGATCCTCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGACCATGCCGGCTTCAAACTAAGAGATCCTCCTGCC  50

seq1  TCTGCTTCTTGAGTGCTGGAATTAAAGTTGCCATGGCTTTTCAACACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCTTGAGTGCTGGAATTAAAGTTGCCATGGCTTTTCAACACAGC  100

seq1  CCTGGTTGTCCTAGAACTCACTATGTAGTCCAGATGTGTCTGCTTCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTGTCCTAGAACTCACTATGTAGTCCAGATGTGTCTGCTTCTGGG  150

seq1  GTTAAAGACATGTACCATGCCCACTGAACAGCTATCTCTGTAGCCCCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGACATGTACCATGCCCACTGAACAGCTATCTCTGTAGCCCCCAC  200

seq1  ATGGCATTTTTTAATCCAGTCAAGTTGACAGTGGGAATTAATCATCATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTTTTTAATCCAGTCAAGTTGACAGTGGGAATTAATCATCATAA  250

seq1  GGACTAAAGCCAGAGCCCCTGTCCCCAGATATCCAGGCTGTGGTTTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAAAGCCAGAGCCCCTGTCCCCAGATATCCAGGCTGTGGTTTTATT  300

seq1  GGAAACCACTGTTCATTAATAGGTACTTTCATCTTAGGACCACAATCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCACTGTTCATTAATAGGTACTTTCATCTTAGGACCACAATCTGC  350

seq1  TGGCAGTGGGAATGGTGGTGTCTGGCAAGCTCAAGGATGTGGGGGTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTGGGAATGGTGGTGTCTGGCAAGCTCAAGGATGTGGGGGTTTAA  400

seq1  TAACTTGACATAAGTGGGCTCTAGACACCCACTGTTTTTCTTTTTGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGACATAAGTGGGCTCTAGACACCCACTGTTTTTCTTTTTGAGGT  450

seq1  AACTTGGTATTTTTTTCCTGTTAAATATACTCAGCTAATATATTTCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGTATTTTTTTCCTGTTAAATATACTCAGCTAATATATTTCAATT  500

seq1  CCCACTGAAAGTATTATTGATGGCTCTGTGAAAATTTGAATAAGGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAAAGTATTATTGATGGCTCTGTGAAAATTTGAATAAGGGAAAA  550

seq1  TGTGCTACCGGCATGTTGTGTGGCCATAGGCACACGGCTTCAGTTCTCTG  600
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTGCTACCGGCATGTTGTGTGGCCATAGGCTCACGGCTTCAGTTCTCTG  600

seq1  AGCCAAACTTTTCCCAGTTCTATAAATGTACAGGTCAGACCTGGTGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAACTTTTCCCAGTTCTATAAATGTACAGGTCAGACCTGGTGGTCT  650

seq1  CTTGGGCTCATTTCAATCTTTCAGTCTTGAGAATTGGTAGTTCAAATTTA  700
      ||||| ||||||||| |||||||||||||||| |||||||||||||||||
seq2  CTTGGACTCATTTCAGTCTTTCAGTCTTGAGATTTGGTAGTTCAAATTTA  700

seq1  CTGTGGGCACTTATAGTAATATTTTTATTAAATTTTAAGACATTTATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGCACTTATAGTAATATTTTTATTAAATTTTAAGACATTTATTAT  750

seq1  TTTTTATGAAACATTTATTTTATGTATGTCTG-CCTGGTGTTTTGCCTGG  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTTATGAAACATTTATTTTATGTATGTCTGCCCTGGTGTTTTGCCTGG  800

seq1  ATGTATGTCGGAAGAGGCCAGAGGAGCATGTTAGATCCTATGGGGCTGGA  849
      |||||||||||||||||||| |||| ||||||| ||||||||||||| ||
seq2  ATGTATGTCGGAAGAGGCCATAGGAACATGTTATATCCTATGGGGCTCGA  850

seq1  GTTACAGATAGATTTGAACTGCCAAATGGGTGCTGAGAATTGAAACTGAA  899
      ||||||||||||||||||||||| ||||||||||||||| |||||||| |
seq2  GTTACAGATAGATTTGAACTGCC-AATGGGTGCTGAGAA-TGAAACTG-A  897

seq1  TCTTCAAGAACAGCCAGTGATCTTAACCACTGAGC  934
      || || | |||||||| ||||||| | ||||||||
seq2  TCATCCACAACAGCCACTGATCTT-AGCACTGAGC  931