BAC Information

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BAC

Clone NameB6Ng01-014O05
Chromosome2 (Build37)
Map Location 11,586,861 - 11,587,919
singlet/doubletsinglet
Overlap geneIl2ra
Upstream geneLOC100040690, LOC100040703, LOC667192, Prkcq, LOC100040733, LOC100040898, LOC667211, Pfkfb3, Rbm17
Downstream geneIl15ra, Fbxo18, Ankrd16, EG635919, LOC667247, Itga8, 2310047O13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014O05.bB6Ng01-014O05.g
ACCDH849304DH849305
length1,055936
definitionDH849304|Mus musculus domesticus DNA, BAC clone: B6Ng01-014O05, 5' end.DH849305|Mus musculus domesticus DNA, BAC clone: B6Ng01-014O05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttcatgacctcccagagaagcttgtaaacaaattattttta
ctcatttttggctgttgcgctgatgtttcttttatgacaccagagcaaca
agagctaagaatatccccaatttactcttaagggattaaaaagaataaaa
tctctagggctgcctttcccatgggctcttctgccttggagtctttgaat
aagttttggaacacatttggcaaggcctttcagggagagagaatcataag
caattctgagaaaggttcttttagaaatggaaaatctgtgagagtacaaa
attctacaactgtctccgtgaccccacatgacctccttggacactggact
agttccggatgactgtggaaatttccatggcaaagccttgtctagaaaaa
catcaccgaactctgaggaatgcttaggggtgcaatgtcatcccaaagaa
aacttatctgacctttcttaaagttatgcatgtgaaaggtttcttagctt
gtggtttggtaccagattccaaatatgatcaagatgaatccctgactatt
tgcactgacgagtagttactcaagaattgctaaattaattggttttgttt
cagtgaaattagctatagaggagttattcttaaaaggttttatttattat
tttaatgtatttaatgtgcgtatctgtgcctgtgtgagtgcatgcacact
tgtgtgcatagaagcacatgcctgagtgttattaatgtccataagatatt
ccggtgtgccattctgcctattcctttgaggcagagtctctccctgaacc
tgaggctcagactctctcagctagtctggaagctagactattcgagctgt
cttcctgttcctgtctgcacttcccctccgggctagtgttccaggctttt
gcaggaagccccatcttctgcaggggccctggaatccaaaatctggtcct
tgtgattgtgggccagagcaacagcggatctgtctttccagaccccaaac
atgcaagcttattttactattcactattgttggggttgtcattgggtgtg
tgtgg
gaattctagaaagtctttcatttctttctttcccgacaaattatcattga
gtagagatttatacagtttccatgagtatgtgggctttctgttgtttctg
tagttgttgaagtccagacttagtccatgggaatctgataagatgcaaat
atcttggttctgttaaggcttgttttgtgtccaattatatggtcaatttt
ggagagggctctatgcagtgctgagaagtattttggtgaaaggtactata
gatgtctataatgtcgatttggttcataacatctgttaatttcattgttt
ttcacattctgtcttgatgacctgtccatttgtgggagtggtattttgta
ctctcccaatttcatggtgtagggtttgatgtatgatttgaactttaata
atgttttctttcacgaaagtggttgcccttgcatttggagcatagatgtt
tataactgagacgtcatcttggtggatttttcttttggtgagtaagaagt
gcttttccctatgttttttggttgctttgaagtgaaagtctatcttagta
aatgttaaaattgctactccagcatgtttcttgggtcttttgcttggaga
acttttttccagcatatactctaaggtagtttctatttttgttgctgagg
agggtatcgtgtatgtagctgtaatagatccaatttacacatcctacccc
gttctgttatccctgtctctgttttatttgtgaatggatgttgagagata
ttaataaccaatgattgtttgttcttcttattttgatgttgatggtgtta
ctgtgtggtgtgtgagtgtgatacctttgtttgattttttctgttagatg
atacttccttttgtttccttggattttgttcccctccttgtgtggaattt
tccttctagtaccccggtagtatggattagagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_11586861_11587919
seq2: B6Ng01-014O05.b_47_1100

seq1  GAATTCTCCTTCATGACCTCCCAGAGAAGCTTGTAAACAAATTATTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTCATGACCTCCCAGAGAAGCTTGTAAACAAATTATTTTTA  50

seq1  CTCATTTTTGGCTGTTGCGCTGATGTTTCTTTTATGACACCAGAGCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTTGGCTGTTGCGCTGATGTTTCTTTTATGACACCAGAGCAACA  100

seq1  AGAGCTAAGAATATCCCCAATTTACTCTTAAGGGATTAAAAAGAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAAGAATATCCCCAATTTACTCTTAAGGGATTAAAAAGAATAAAA  150

seq1  TCTCTAGGGCTGCCTTTCCCATGGGCTCTTCTGCCTTGGAGTCTTTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGGGCTGCCTTTCCCATGGGCTCTTCTGCCTTGGAGTCTTTGAAT  200

seq1  AAGTTTTGGAACACATTTGGCAAGGCCTTTCAGGGAGAGAGAATCATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTGGAACACATTTGGCAAGGCCTTTCAGGGAGAGAGAATCATAAG  250

seq1  CAATTCTGAGAAAGGTTCTTTTAGAAATGGAAAATCTGTGAGAGTACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGAGAAAGGTTCTTTTAGAAATGGAAAATCTGTGAGAGTACAAA  300

seq1  ATTCTACAACTGTCTCCGTGACCCCACATGACCTCCTTGGACACTGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACAACTGTCTCCGTGACCCCACATGACCTCCTTGGACACTGGACT  350

seq1  AGTTCCGGATGACTGTGGAAATTTCCATGGCAAAGCCTTGTCTAGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCGGATGACTGTGGAAATTTCCATGGCAAAGCCTTGTCTAGAAAAA  400

seq1  CATCACCGAACTCTGAGGAATGCTTAGGGGTGCAATGTCATCCCAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCGAACTCTGAGGAATGCTTAGGGGTGCAATGTCATCCCAAAGAA  450

seq1  AACTTATCTGACCTTTCTTAAAGTTATGCATGTGAAAGGTTTCTTAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATCTGACCTTTCTTAAAGTTATGCATGTGAAAGGTTTCTTAGCTT  500

seq1  GTGGTTTGGTACCAGATTCCAAATATGATCAAGATGAATCCCTGACTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTGGTACCAGATTCCAAATATGATCAAGATGAATCCCTGACTATT  550

seq1  TGCACTGACGAGTAGTTACTCAAGAATTGCTAAATTAATTGGTTTTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGACGAGTAGTTACTCAAGAATTGCTAAATTAATTGGTTTTGTTT  600

seq1  CAGTGAAATTAGCTATAGAGGAGTTATTCTTAAAAGGTTTTATTTATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAATTAGCTATAGAGGAGTTATTCTTAAAAGGTTTTATTTATTAT  650

seq1  TTTAATGTATTTAATGTGCGTATCTGTGCCTGTGTGAGTGCATGCACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTATTTAATGTGCGTATCTGTGCCTGTGTGAGTGCATGCACACT  700

seq1  TGTGTGCATAGAAGCACATGCCTGAGTGTTATTAATGTCCATAAGATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCATAGAAGCACATGCCTGAGTGTTATTAATGTCCATAAGATATT  750

seq1  CCGGTGTGCCATTCTGCCTATTCCTTTGAGGCAGAGTCTCTCCCTGAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGTGCCATTCTGCCTATTCCTTTGAGGCAGAGTCTCTCCCTGAACC  800

seq1  TGAGGCTCAGACTCTCTCAGCTAGTCTGGAAGCTAGACTATTCGAGCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTCAGACTCTCTCAGCTAGTCTGGAAGCTAGACTATTCGAGCTGT  850

seq1  CTTCCTGTTCCTGTCTGCACTTCCCCTCCGGGCTAGTGTTCCAGGCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTTCCTGTCTGCACTTCCCCTCCGGGCTAGTGTTCCAGGCTTTT  900

seq1  GCAGGAAGCCCCCATCTTCTGCAGGGGCCCTGGAATCCAAAATCTGGTCC  950
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAG-CCCCATCTTCTGCAGGGGCCCTGGAATCCAAAATCTGGTCC  949

seq1  TTGTGATTGTGGGGCCAAGAGCAACAGCGGATCTGTCTTTCCAGACCCCA  1000
      |||||||||||||  | |||||||||||||||||||||||||||||||||
seq2  TTGTGATTGTGGG--CCAGAGCAACAGCGGATCTGTCTTTCCAGACCCCA  997

seq1  AACATGCAGGCTTTATTTTACTAATCACTATTGTGGGGGTGGTCATTGGG  1050
      |||||||| || ||||||||||| |||||||||| ||||| |||||| ||
seq2  AACATGCAAGC-TTATTTTACTATTCACTATTGTTGGGGTTGTCATT-GG  1045

seq1  GTGTGTGTG  1059
      |||||||||
seq2  GTGTGTGTG  1054