BAC Information

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BAC

Clone NameB6Ng01-015C06
Chromosome2 (Build37)
Map Location 86,464,676 - 86,465,631
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083
Downstream geneOlfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015C06.bB6Ng01-015C06.g
ACCDH849482DH849483
length6361,019
definitionDH849482|Mus musculus domesticus DNA, BAC clone: B6Ng01-015C06, 5' end.DH849483|Mus musculus domesticus DNA, BAC clone: B6Ng01-015C06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatgctatgcactcactgataagtggatattagcctagaaact
tagaatattcaagatacaatttgcaaaacacagggaaatcaagaagaagg
aagacaaaagtatggatactttgctacttcttagaatggggaacaatata
cccatggaagaagttatagagacaaagttaggagctgagatggatggaaa
gaccatccagattctgacacacctggggatccatcccataattagacacc
aattacagacactattgcatatgccagcaagattttgctgaaaggaccct
gatttagctgtcgcttgtgaatctataccagtacctggcaaatacagaag
tggatgctcacagtcatctattggatggaacagagggcccccaatggagg
agatagagcaaataaccaaggagatgaaggggctacaactgtataggagg
aacaacgatatgaactaaccagtacccccatatctcgtgtctctagctgc
atatgtagcagaagatggcctagtcggccattaatgggaggagaggcccc
tggtcttgcaaagattatatgccccggtagaggggaatgtcaggtccagg
aagcaggagtgggtgggtttgggaggagggctgggg
gaattctccaccctgccttaaccacttgataacatgagaaaaggaacaaa
aaggctcctaacactggagaaagttcaaggccagacataccttgtaaagc
tgtaacatgacccgaagttctggttccggaatgagggatcttccttgcgc
tggtgtcatggtataaagttcccgggtttcggcaccacttattgcctgag
cttttgctcccaccggaaagaacacgctcaggacaaccggaatcttctgc
ggcaaaagcttcattacttacttcttcaggagcaagagagaaaatggcaa
aaccccgtcccttttaaggagaattatcctccgcctaggacgcgtcgctc
cctgattggctgcagcccatcggccgagttgtcatcatggggaaggcaga
gcatatagagtgaagaactaccctggcacatgtgcagattatttatttac
tacttagaacacaggatgtcagcgccatcttgtaatggcgaatgtgaggg
cagctcctcacaaagagagaaagaaagaaagaaagaaagaaagaaagaaa
gaaagacagacagaaaaggttaccctctctttcacaggagtgctgtggct
gacgaaataagtttttgtgatgagatgtcctatacttagagatctgttgg
taaaaagcccaggaaatttagaaacagcttggaattatgtgtcatgtgat
tgcagagtctataagaatattattagcccccttcttcttttaggtacaga
ctgatacctgtgaatttaccaaaatggacaattaagggataggtgtgtat
atagatcagcaaagagaggcatatcctacagctggtgtactttgcaacat
tggaattattgaacaagtgatgagctacatagagcatgtctgctagatat
ttagaggtctttactggggactggagaagtaagtgaaacaattaagaaga
agtgaatattagaatgcatatgctaaacttacaggtcaatgtaataattg
attttgctagttgaagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86464676_86465631
seq2: B6Ng01-015C06.g_137_1089

seq1  GAGAAAGTTCAAGGCCAGACATACCTTGTAAAGCTGTAACATGACCCGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTTCAAGGCCAGACATACCTTGTAAAGCTGTAACATGACCCGAA  50

seq1  GTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCTGGTGTCATGGTATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCTGGTGTCATGGTATAA  100

seq1  AGTTCCCGGGTTTCGGCACCACTTATTGCCTGAGCTTTTGCTCCCACCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCGGGTTTCGGCACCACTTATTGCCTGAGCTTTTGCTCCCACCGG  150

seq1  AAAGAACACGCTCAGGACAACCGGAATCTTCTGCGGCAAAAGCTTCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACACGCTCAGGACAACCGGAATCTTCTGCGGCAAAAGCTTCATTA  200

seq1  CTTACTTCTTCAGGAGCAAGAGAGAAAATGGCAAAACCCCGTCCCTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCTTCAGGAGCAAGAGAGAAAATGGCAAAACCCCGTCCCTTTTA  250

seq1  AGGAGAATTATCCTCCGCCTAGGACGCGTCGCTCCCTGATTGGCTGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATTATCCTCCGCCTAGGACGCGTCGCTCCCTGATTGGCTGCAGC  300

seq1  CCATCGGCCGAGTTGTCATCATGGGGAAGGCAGAGCATATAGAGTGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCGGCCGAGTTGTCATCATGGGGAAGGCAGAGCATATAGAGTGAAGA  350

seq1  ACTACCCTGGCACATGTGCAGATTATTTATTTACTACTTAGAACACAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCTGGCACATGTGCAGATTATTTATTTACTACTTAGAACACAGGA  400

seq1  TGTCAGCGCCATCTTGTAATGGCGAATGTGAGGGCAGCTCCTCACAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCGCCATCTTGTAATGGCGAATGTGAGGGCAGCTCCTCACAAAGA  450

seq1  GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGACAGACAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGACAGACAGAAA  500

seq1  AGGTTACCCTCTCTTTCACAGGAGTGCTGTGGCTGACGAAATAAGTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTACCCTCTCTTTCACAGGAGTGCTGTGGCTGACGAAATAAGTTTTT  550

seq1  GTGATGAGATGTCCTATACTTAGAGATCTGTTGGTAAAAAGCCCAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAGATGTCCTATACTTAGAGATCTGTTGGTAAAAAGCCCAGGAAA  600

seq1  TTTAGAAACAGCTTGGAATTATGTGTCATGTGATTGCAGAGTCTATAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAACAGCTTGGAATTATGTGTCATGTGATTGCAGAGTCTATAAGA  650

seq1  ATATTATTAGCCCCCTTCTTCTTTTAGGTACAGACTGATACCTGTGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTAGCCCCCTTCTTCTTTTAGGTACAGACTGATACCTGTGAATT  700

seq1  TACCAAAATGGACAATTAAGGGATAGGTGTGTATATAGATCAGCAAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAATGGACAATTAAGGGATAGGTGTGTATATAGATCAGCAAAGAG  750

seq1  AGGCATATCCTACAGCTGGTGTACTTTGCAACATTGGAATTATTGAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATATCCTACAGCTGGTGTACTTTGCAACATTGGAATTATTGAACAA  800

seq1  GTGATGAGCTACATAGAGCATGTCTGCTAGATATTTAGAGGTCTTTACT-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGATGAGCTACATAGAGCATGTCTGCTAGATATTTAGAGGTCTTTACTG  850

seq1  GGGACTGGAGAAGTAAAGTGAAACAA-TAAGAAGAAGTGAATATTAGTAT  898
      |||||||||||||| ||||||||||| |||||||||||||||||||| ||
seq2  GGGACTGGAGAAGT-AAGTGAAACAATTAAGAAGAAGTGAATATTAGAAT  899

seq1  GCATATGCTAGAACTTACAGGTCAATGTAAATAATTTGATTTTGCATAGT  948
      |||||||||| ||||||||||||||||| ||||| |||||||||| ||||
seq2  GCATATGCTA-AACTTACAGGTCAATGT-AATAA-TTGATTTTGC-TAGT  945

seq1  TGAAGTCC  956
      ||||||||
seq2  TGAAGTCC  953