BAC Information

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BAC

Clone NameB6Ng01-015L23
Chromosome2 (Build37)X (Build37)
Map Location 142,776,842 - 142,777,69864,563,073 - 64,563,860
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015L23.bB6Ng01-015L23.g
ACCDH849921DH849922
length903789
definitionDH849921|Mus musculus domesticus DNA, BAC clone: B6Ng01-015L23, 5' end.DH849922|Mus musculus domesticus DNA, BAC clone: B6Ng01-015L23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,842 - 142,777,698)(64,563,073 - 64,563,860)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattagc
tccgggctaccttgccagcagagtcttgcccaacacccgcaagggcccac
acgggactccccacgggaccctaagacctctggtgagtggaccacagtgc
ctgccccaatccaatcgcgcggaacttgagactgcggtacatagggaagc
aggctacccgggcctgatctggggcacaagtcccttccgctcgactcgag
actcgagccccgggctaccttgccagcagagtcttgcctaacacccgcaa
gggtccacacgggactccccacgggaccctaagacctctggtgagtgttt
ttggtttctgttagtaagattcttacattttccttttgccatctggtaat
ctttggtgttaatgttcaaggtgtctctggctggagcttgatcctcctgt
gattctgtagcctatgtcatcactcctggcagtctaactctcactgattt
cctgtgtcagagcactctctgcagtagctctctcttgcaggcagtgtcag
agt
gaattcacttaaacgttgttcttatgtattgttccttcataatcctcaca
tagctcatcaatgtctgcgtttgtgtgagtgttgaaataaactaccaatt
ttcttaatatgttatagggagaaaatatgtctaattattcactatgaatt
ttgaaaattattaatcgttattgtgtttgtatagaacaaagttcacatgt
agtgagtggtcagaggacaacatacagaaatcagttcttgcctttctccc
tcttctgtaatgttacatgagtcttagaaaaagcaatgaaaatgttttgc
ttagggataagccctcaactacagtggtacttttagaaatagagctatct
agttttgttttttttttttattatgtattttcctcaattacatttccaat
gctatcccaaaagcctcccaccccccccccactaccctacccacccattc
ccatttttttgccctggcgttcccctgtactggggcatataaactttgcc
tgtccagtgggcctctctttccagtgatggccgactaggccatcttttga
tacatatgctatctagttttgaaaaatcatcaggaatagtggcagaaatc
tatgaatctatgctgtattgggaagactttggtgcgtccctgaccaacac
tcgtagtattccctacctgggactggaaattttgattactaaccaacaac
ttctaataaaagcattttctagcaatgcagggtaagtcctttataatata
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776842_142777698
seq2: B6Ng01-015L23.b_42_438 (reverse)

seq1  AATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCA  50
                                                        
seq2  --------------------------------------------------  0

seq1  AGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTG  100
                                                        
seq2  --------------------------------------------------  0

seq1  GGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAAC  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGA  200
                                                        
seq2  --------------------------------------------------  0

seq1  AACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGA  250
                                                        
seq2  --------------------------------------------------  0

seq1  CCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGG  300
                                                        
seq2  --------------------------------------------------  0

seq1  ACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAAT  350
                                                        
seq2  --------------------------------------------------  0

seq1  CAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGGAAGAA  400
                                                        
seq2  --------------------------------------------------  0

seq1  AGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTA  450
                                                        
seq2  --------------------------------------------------  0

seq1  GAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCT  500
                ||||||||||||||||||||||||||||||||||||||||
seq2  ----------AATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCT  40

seq1  AAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGA  90

seq1  GGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCC  140

seq1  TGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGG  650
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  TGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGACAAATGG  190

seq1  GACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAA  700
      ||||||||||||||||||||||||||||||||||||||||| ||| ||||
seq2  GACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAA  240

seq1  GACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAAT  750
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAAT  290

seq1  CAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGAC  340

seq1  CTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAA  850
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAA  390

seq1  AGAATTC  857
      |||||||
seq2  AGAATTC  397

seq1: chrX_64563073_64563860
seq2: B6Ng01-015L23.g_65_853

seq1  GAATTCACTTAAACGTTGTTCTTATGTATTGTTCCTTCATAATCCTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAAACGTTGTTCTTATGTATTGTTCCTTCATAATCCTCACA  50

seq1  TAGCTCATCAATGTCTGCGTTTGTGTGAGTGTTGAAATAAACTACCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCATCAATGTCTGCGTTTGTGTGAGTGTTGAAATAAACTACCAATT  100

seq1  TTCTTAATATGTTATAGGGAGAAAATATGTCTAATTATTCACTATGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATATGTTATAGGGAGAAAATATGTCTAATTATTCACTATGAATT  150

seq1  TTGAAAATTATTAATCGTTATTGTGTTTGTATAGAACAAAGTTCACATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATTATTAATCGTTATTGTGTTTGTATAGAACAAAGTTCACATGT  200

seq1  AGTGAGTGGTCAGAGGACAACATACAGAAATCAGTTCTTGCCTTTCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTGGTCAGAGGACAACATACAGAAATCAGTTCTTGCCTTTCTCCC  250

seq1  TCTTCTGTAATGTTACATGAGTCTTAGAAAAAGCAATGAAAATGTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTAATGTTACATGAGTCTTAGAAAAAGCAATGAAAATGTTTTGC  300

seq1  TTAGGGATAAGCCCTCAACTACAGTGGTACTTTTAGAAATAGAGCTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGATAAGCCCTCAACTACAGTGGTACTTTTAGAAATAGAGCTATCT  350

seq1  AGTTTTGTTTTTTTTTTTTATTATGTATTTTCCTCAATTACATTTCCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGTTTTTTTTTTTTATTATGTATTTTCCTCAATTACATTTCCAAT  400

seq1  GCTATCCCAAAAGCCTCCCACCCCCCCCCCACTACCCTACCCACCCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCCAAAAGCCTCCCACCCCCCCCCCACTACCCTACCCACCCATTC  450

seq1  CCATTTTTTTGCCCTGGCGTTCCCCTGTACTGGGGCATATAAACTTTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTTGCCCTGGCGTTCCCCTGTACTGGGGCATATAAACTTTGCC  500

seq1  TGTCCAGTGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGTGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGA  550

seq1  TACATATGCTATCTAGTTTTGAAAAATCATCAGGAATAGTGGCAGAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGCTATCTAGTTTTGAAAAATCATCAGGAATAGTGGCAGAAATC  600

seq1  TATGAATCTATGCTGTATTGGGAAGACTTTGGTGCGTCCCTGACCAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATCTATGCTGTATTGGGAAGACTTTGGTGCGTCCCTGACCAACAC  650

seq1  TCGTAGTATTCCCTACCTGGGACTGGAAATTTTGATTACTAACCAACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTAGTATTCCCTACCTGGGACTGGAAATTTTGATTACTAACCAACAAC  700

seq1  TTCTAATAAAAGCATTTTCTAGCAATGCAGGGTAAGTCC-TTATAATATA  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCTAATAAAAGCATTTTCTAGCAATGCAGGGTAAGTCCTTTATAATATA  750

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  788
      |||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  789