BAC Information

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BAC

Clone NameB6Ng01-017E11
Chromosome2 (Build37)
Map Location 142,776,279 - 142,776,807
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017E11.bB6Ng01-017E11.g
ACCDH851008DH851009
length965976
definitionDH851008|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E11, 5' end.DH851009|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcaaatagtccttatcttagagtttcgattgctgagatgcgac
accatgacgaaggcaactcttaaaagggacaagatttaattgtggctgac
tttcagtttcagaggttcagtccactatcaccatggcaggacactgcatg
gcagtgtccagacagacatggtgctagagagggagccaagagttctacat
cttgacttgaagactgtcttccaggtaactaggaggagggtctcaaagct
caccccccacagtgacacacttcctccaacaaggccacacctactccaac
aagaccacacctcttaattgtgccactccctggtgcaagcatttcaaact
accatagtcctattgaaccagaaaagtttccctgggtaagtcctcactag
tacagcacccacaccacagtggtcatttgttaccattgcacatacaccag
tacattattgtcatgtagaatccatggtctgtataaaaggcttgttctta
ctgttgtatgtcctgtatactttgataagtgtattgatcactataacaac
atagagaacagctgtggtgccttcaaatatctaccagtttatcattccgt
tccacagtcactggaaaccgatgctcttttttatggtctccatagcctcc
ccttttctaggatatcatgttattatctatactatggactttcacattgg
cttctgtcacttagtaagatacatctgaggctcttctatgtctctttata
gttttgtaactcactttttctttagtggtgtgcaatagtctgttgtgtgg
ctattatcatgtgaccctccagggctgaatggcaccctgggtgctttcta
agagttttcagttgtgaatatagctacaagtacccatggtgcagacttac
gtgggagataatcagggtttcagctcattttgggtaaatatcagggaaat
gcaattggcttgcct
gaattctttgtatagctctgagccccatttttaatggggttatctgattt
tctggagtccaccttcttcagttctttatatatattagatgttagtcccc
tatctgatttaggataggtaaagatcctttcccagtctgatggtggcctt
tttgtcttattgacggtgtcctttgccttacagaagctttgcaattttat
gaggtcccatttgtcaattctccatcttacaagccattgctgttctattc
aggaatttcccccctgtgcccatatcttcaaggcttttccccactttctc
ctctataagtttcactgtctctggttttatgtggagttccttgatccacc
tagatttgaccttagtacaaggagataggaatggatcaattcgcattctt
ctacatgttaaccgtcagttgtgctagcaccatttgttgaaaatgctgtc
ttttttccaatggatggttttagctcccttgtcaaagatcaagtgaccat
aggtgtgtgggttcatttctgggtcttcaattctattccactggtctact
tgtctgtcattgaatctgtagattgctgtaccagtaccatgcagtttttt
aatcagaatttgctctgtagtacagctttaggtcaggcatggtgattcca
ccagaggtttcttttatccttgagaagagttttttgctatcctaggtttt
ttttgtttatttccatatgaatttgcagattgctgtttctaattcgttga
agaattgagttggaattttgatggggtttgcaatgaatctgtagattgct
tttggcaagatagccatttttactatattgattcctgcccaatccatgag
catgggagatctttccatctttttgagatcttctttaatttcttttcttc
aaaactttgaagttcatttcaaacgatctttcacttccttaaagtcacac
cagtgtttttatatttttgttactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776279_142776807
seq2: B6Ng01-017E11.g_493_1043 (reverse)

seq1  ATAGTCACAAATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAGT  50
      ||||| ||||| |||||||||   || || ||||||     |||||||||
seq2  ATAGTAACAAA-AATATAAAAACACT-GGTGTGACT----TTAAGGAAGT  44

seq1  GAAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAG-AAAGAAATTAAA  99
      |||||||| || ||| |  ||||||||   | ||||| ||||||||||||
seq2  GAAAGATC-GTTTGAAATGAACTTCAAAGTTTTGAAGAAAAGAAATTAAA  93

seq1  GAAGATCTC-AGAAGATGGAAGGATCTCCCATGCTCATGGATT-GGCAGG  147
      ||||||||| | ||||||||| ||||||||||||||||||||| ||||||
seq2  GAAGATCTCAAAAAGATGGAAAGATCTCCCATGCTCATGGATTGGGCAGG  143

seq1  -ATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCA  196
       ||||| || ||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATATAGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCA  193

seq1  ATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGA  246
       ||||| ||||||||||||||||||||||||||||||||||||||||  |
seq2  TTGCAAACCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAACA  243

seq1  GCAATTTGCAAATTCATCTGG-AATA---ACAAAAAACCTAGGATAGC-A  291
      ||||| ||||||||||| ||| ||||   | ||||||||||||||||| |
seq2  GCAATCTGCAAATTCATATGGAAATAAACAAAAAAAACCTAGGATAGCAA  293

seq1  AAAAGTCTTCTCAAGGATAAAAG-AACCTCTGGTGGAATCACCATGCCTG  340
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAACTCTTCTCAAGGATAAAAGAAACCTCTGGTGGAATCACCATGCCTG  343

seq1  ACCTAAAGCTTTACTACAGAGC-AATTGTGAT--AAAAACTGCATGGTAC  387
      |||||||||| ||||||||||| |||| ||||  ||||||||||||||||
seq2  ACCTAAAGCTGTACTACAGAGCAAATTCTGATTAAAAAACTGCATGGTAC  393

seq1  TGGTATAG----------------AGACAGACAAGTAGACCAATGGAATA  421
      ||||| ||                 ||||||||||||||||| |||||||
seq2  TGGTACAGCAATCTACAGATTCAATGACAGACAAGTAGACCAGTGGAATA  443

seq1  GAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTC  471
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTT  493

seq1  GACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAA  521
      |||||||||||||||||||||||  |||| ||||||||||||||||||||
seq2  GACAAGGGAGCTAAAACCATCCATTGGAAAAAAGACAGCATTTTCAACAA  543

seq1  TTGGTGCT  529
       |||||||
seq2  ATGGTGCT  551