BAC Information

Click to search

BAC

Clone NameB6Ng01-018A13
Chromosome2 (Build37)
Map Location 42,662,746 - 42,663,840
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC625094
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018A13.bB6Ng01-018A13.g
ACCDH851544DH851545
length1,1901,085
definitionDH851544|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A13, 5' end.DH851545|Mus musculus domesticus DNA, BAC clone: B6Ng01-018A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaattgaggaataacgaagggctgagaagcagttgaaaaaaaa
tgttcaacatccttaatcatgagggaaatgcaaatctaaacaaccctgag
attccatctcataccagtcagaatgtataaggtcaaaaactcatgtgaca
gcagatgctggtgaggttgtggagtaagaagaacactcttccattgctgg
tgggattacaagctggttcaaccactctgaaaatcagtttgtcaggtcct
cagaaaatttgacatagtactacctgaggatccagcaataacactccagg
gcatatacctaaaagatgctccaacatggaataaggacacatgctccatt
atgttcatagcaggctcatttataatagccagaaggtggaaaggacccag
gtgtccttcaataaaagaatagatattgaaaatgtggtacatttatacaa
gggagtactactcagatattaaaaataatgaacttatgaaataactcatc
accctgagtgagataacccaatcacaaaaaaacacacatgatatgcactc
actgataagtggatattagcccagaacctcggaatacccaaggtataatt
agcaaaacacattaaactcaagaaagaaggaataccaaagtatggatact
tcaatgcttcttaaaagtgggaacaaaatacccagaggaggagttacaga
gacaaagtgtggagcagagactgaaggaatgaccatccagagactgcccc
actttgggatccatcccataaaaataccaccaaaaccagacactattgtg
gatgccaacaagagcatgatgacaggagactgatatagctgtctcctgag
aggctctgtcagtgcctgacaaatacaaaagtggatgctcacagccatcc
attggacagagccagggccccaaatgaaggagctagagtaagtaccaagg
agctgagatgtttgcatccccacaggaggaaacatatgaaataactacta
cctccagtgctccctggactaaaccaccaaccaatgaaacacatggtggg
actcatggctctgtctggtatatgtagcaaaggatggcctattgggcctc
atgaaagaaaaggccttcatccttgtgcctcattctagtcccagttatag
gtgaatgccatggccaggaagcgaaattgttgctgtagag
gaattctacttaagaatgaatcaaaagcaggcatttttatcttatgaaat
agattcacttggtatatgcctttaaaactatcttttatgttatcacttat
attcatttcttttgaggactagcagcattttaaattaattttatagtttc
tttctatttgaagactgcacccaggctgtggctaagctaattcgaatgta
atgagtatgttttggaaacaggacttgatagtctcagtgtactttccatt
ttaatggcccaaaggttttagaataggaatacactgtaggttggagaact
tgttaatgatgaatggacttatcatgacaaaattataatatacttaagtt
aatatcccttataatagagtaaagataaattgatttatgactattaaagt
gtgcagtcagaataaacagcatcagccttacctggctacctgctagacat
gcagtttctcagtacacacccacaccaatagcagtacagggagaaactct
cggctgaaagacccagcaatgtgttgttgatgttcactgaaacttcacaa
taaagaatatttggaagaactgatataatataactgactgtaaatttatt
agagaatttgtctcctattattagctctcatgaaagtaatcttgaaaatg
acctttgcctactaagtaattatgaataagtagaaaagaaattttcaata
gtagaaaaaaagtggccagtgaaaacgtgatcattacaatcatttttgag
ttactttgctccttttatgttgactcaaaatagctatgtataaagccact
ataacagacatataattatgccattttctatcagatattttctttattta
cattacaaatgttttttcatttccaggtctccccttcaaaacctcctatt
ccctaccaccttcccctgcttctatgaggtgctccctgaccacctaccca
ctccagttcttcccacctgatatcccctattgcttttttttcttcaattt
tagaaccagcagcagtacctgacaactgtggaatttatttgacctctctt
tataaagtatgttttaaagttatcatgctttaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42662746_42663840
seq2: B6Ng01-018A13.g_68_1152

seq1  GAATTCTACTTAAGAATGAATCAAAAGCAGGCATTTTTATCTTATGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTAAGAATGAATCAAAAGCAGGCATTTTTATCTTATGAAAT  50

seq1  AGATTCACTTGGTATATGCCTTTAAAACTATCTTTTATGTTATCACTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCACTTGGTATATGCCTTTAAAACTATCTTTTATGTTATCACTTAT  100

seq1  ATTCATTTCTTTTGAGGACTAGCAGCATTTTAAATTAATTTTATAGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTCTTTTGAGGACTAGCAGCATTTTAAATTAATTTTATAGTTTC  150

seq1  TTTCTATTTGAAGACTGCACCCAGGCTGTGGCTAAGCTAATTCGAATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTGAAGACTGCACCCAGGCTGTGGCTAAGCTAATTCGAATGTA  200

seq1  ATGAGTATGTTTTGGAAACAGGACTTGATAGTCTCAGTGTACTTTCCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTATGTTTTGGAAACAGGACTTGATAGTCTCAGTGTACTTTCCATT  250

seq1  TTAATGGCCCAAAGGTTTTAGAATAGGAATACACTGTAGGTTGGAGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGCCCAAAGGTTTTAGAATAGGAATACACTGTAGGTTGGAGAACT  300

seq1  TGTTAATGATGAATGGACTTATCATGACAAAATTATAATATACTTAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATGATGAATGGACTTATCATGACAAAATTATAATATACTTAAGTT  350

seq1  AATATCCCTTATAATAGAGTAAAGATAAATTGATTTATGACTATTAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCCTTATAATAGAGTAAAGATAAATTGATTTATGACTATTAAAGT  400

seq1  GTGCAGTCAGAATAAACAGCATCAGCCTTACCTGGCTACCTGCTAGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTCAGAATAAACAGCATCAGCCTTACCTGGCTACCTGCTAGACAT  450

seq1  GCAGTTTCTCAGTACACACCCACACCAATAGCAGTACAGGGAGAAACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCTCAGTACACACCCACACCAATAGCAGTACAGGGAGAAACTCT  500

seq1  CGGCTGAAAGACCCAGCAATGTGTTGTTGATGTTCACTGAAACTTCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGAAAGACCCAGCAATGTGTTGTTGATGTTCACTGAAACTTCACAA  550

seq1  TAAAGAATATTTGGAAGAACTGATATAATATAACTGACTGTAAATTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATATTTGGAAGAACTGATATAATATAACTGACTGTAAATTTATT  600

seq1  AGAGAATTTGTCTCCTATTATTAGCTCTCATGAAAGTAATCTTGAAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTTGTCTCCTATTATTAGCTCTCATGAAAGTAATCTTGAAAATG  650

seq1  ACCTTTGCCTACTAAGTAATTATGAATAAGTAGAAAAGAAATTTTCAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGCCTACTAAGTAATTATGAATAAGTAGAAAAGAAATTTTCAATA  700

seq1  GTAGAAAAAAAGTGGCCAGTGAAAACGTGATCATTACAATCA-TTTTGAG  749
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTAGAAAAAAAGTGGCCAGTGAAAACGTGATCATTACAATCATTTTTGAG  750

seq1  TTACTTTGCTCCTTTTATGTTGACTCAAAATAGCTATGTATAAAGCCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTGCTCCTTTTATGTTGACTCAAAATAGCTATGTATAAAGCCACT  800

seq1  ATAACAGACATATAATTATGCCATTTTCTATCAGATATTTTCTTTATTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGACATATAATTATGCCATTTTCTATCAGATATTTTCTTTATTTA  850

seq1  CATTACAAATGTTTTTTCATTTCCAGGTCTCCCCTTCAAAAACCTCCTAT  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CATTACAAATGTTTTTTCATTTCCAGGTCTCCCCTTC-AAAACCTCCTAT  899

seq1  TCCCTACCACCTTCCCCTGCTTCTATGAGGGTGCTCCCTGAACCACCTAC  949
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  TCCCTACCACCTTCCCCTGCTTCTATGA-GGTGCTCCCTG-ACCACCTAC  947

seq1  CCACTCCAG-TCTTCCCACCCTGATATTCCCCTATTGC-TATTTATCTTC  997
      ||||||||| |||||||| ||||||| ||||||||||| | ||| |||||
seq2  CCACTCCAGTTCTTCCCA-CCTGATA-TCCCCTATTGCTTTTTTTTCTTC  995

seq1  AAATTTTAAGAACCAAGCAGCAGTACCTGGACAACTGGTGATATTATTTG  1047
      ||  ||| |||||| ||||||||||||| ||||||||  ||  |||||||
seq2  AA--TTTTAGAACC-AGCAGCAGTACCT-GACAACTGTGGAATTTATTTG  1041

seq1  ACCTCTCTTTATACAGTATGTTTTAAAAAGTTATTCATTGCTTTAACA  1095
      ||||||||||||| ||||||||||  ||||||| ||| ||||||||||
seq2  ACCTCTCTTTATAAAGTATGTTTT--AAAGTTA-TCA-TGCTTTAACA  1085