BAC Information

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BAC

Clone NameB6Ng01-019H17
Chromosome2 (Build37)
Map Location 138,489,841 - 138,490,952
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103, C130053K05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019H17.bB6Ng01-019H17.g
ACCDH852554DH852555
length1871,108
definitionDH852554|Mus musculus domesticus DNA, BAC clone: B6Ng01-019H17, 5' end.DH852555|Mus musculus domesticus DNA, BAC clone: B6Ng01-019H17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacacccctaagccccttaccccataaaaccccctagctttcga
gcctcgtggccgacatccgttatctcctgtgtgggatgcatgtcggtccg
gagctccgtaattaaatgacctcatgtcatcaagatggtccttcgtgatt
ttttgggtgcacgccgaattgggaattgagtgggggt
gaattcctttctgttgttaaggtataattttcaaaaatgtaaaataataa
ttccctggaacatgcaaaatgaacatatgtcaaagctttattcaactaat
taattactaagagaaacatgaggtgttaaaacagcccaaatagctattgg
aaatatcggtatttataggcaagttcagtaaggcaggttaggacagtact
acgggattagatacaaaattgctccggttaacagggtgaagaactacaac
ctctgatgctacctgttttagtgctcaggaatactctgcctctctactga
acaacaacaaaacatatacattcaagaaagtgatttcatgaggcttccaa
caatagcaaactatgagtataaaatacatgcatttgcctatccctgggtg
atgcttatgatacataacaataaaactacccacctcttcccttatgttca
agttctaaaaaatgtttcgtattctcataattactgaccacatctttttc
tgtaagtggaagaactataggcttttccaaagttacaaaaaaagaaaaca
gtcaagcctacagctcagtggaccatcatctttgtcaacactgcccttga
cctctcctgatgctgccccagacctcagtccttgatttcctcagtattga
gggcagagactagtacaatctcctcaaaacctctatttctgttatccctg
cctttgtctagatcccttgcctgtaatgtgggatctataccttcactgaa
agatttctgcaaaagtaatgtgatttttcagatataattaatgtcctaaa
ctcattgatttgaaatgatggaagattatctagggatggatttgagttca
tcaagtgaacattcttaaattaaaagagactttctaaagaatagacttcc
ctcctttcctcaaagaagttagctagcatgttcgaaaagaccatgctgaa
gatcatttcagatagcatcccagggttccaaggtggttcaagagacccag
taagaattactcaaacattttcttgatgactctctaaagccggtcactca
ggagtacacagcctcaaaagcagcaagcttctagacaggaatcctctggc
ctacatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138489841_138490952
seq2: B6Ng01-019H17.g_71_1178 (reverse)

seq1  AGATGTAGGCCAGTAGGTCCCTGTCCTAGAAGCTCTGCTGCTTCTGAGGC  50
      |||||||||||||  | | ||||| ||||||||| |||||||| ||||| 
seq2  AGATGTAGGCCAGAGGATTCCTGT-CTAGAAGCT-TGCTGCTTTTGAGG-  47

seq1  CTGTGCTCTCCTGAGTGGACCGGCTTTAGAGAGTCATCAAAGAGATGGTC  100
      |||||  ||||||||| ||||||||||||||||||||| |||| |  || 
seq2  CTGTGTACTCCTGAGT-GACCGGCTTTAGAGAGTCATC-AAGAAAATGTT  95

seq1  TGAGTTATTCTTACTGGGTCTCTTGAACCACCTTGG-ACCCTGGGATGCT  149
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  TGAGTAATTCTTACTGGGTCTCTTGAACCACCTTGGAACCCTGGGATGCT  145

seq1  ATCTGAAATGATCTTCAGCATGGTCCTTTTCGAACATGCTAGCTAACTTC  199
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATCTGAAATGATCTTCAGCATGGT-CTTTTCGAACATGCTAGCTAACTTC  194

seq1  TTTGAGGAAAGGAGGGAAGTCTATTCTTTAGAAAGTCTCTTTTATTTTAA  249
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTTGAGGAAAGGAGGGAAGTCTATTCTTTAGAAAGTCTCTTTTAATTTAA  244

seq1  GAATGTTCACTTGATGAACTCAAATCCAT-CCTAGATAATCTTCCATCAT  298
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAATGTTCACTTGATGAACTCAAATCCATCCCTAGATAATCTTCCATCAT  294

seq1  TTCAAATCAATGAGTTTAGGACATTAATTATATCTGAAAAATCACATTAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCAATGAGTTTAGGACATTAATTATATCTGAAAAATCACATTAC  344

seq1  TTTTGCAGAAATCTTTCAGTGAAGGTATAGATCCCACATTACAGGCAAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAGAAATCTTTCAGTGAAGGTATAGATCCCACATTACAGGCAAGG  394

seq1  GATCTAGACAAAGGCAGGGATAACAGAAATAGAGGTTTTGAGGAGATTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGACAAAGGCAGGGATAACAGAAATAGAGGTTTTGAGGAGATTGT  444

seq1  ACTAGTCTCTGCCCTCAATACTGAGGAAATCAAGGACTGAGGTCTGGGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTCTCTGCCCTCAATACTGAGGAAATCAAGGACTGAGGTCTGGGGC  494

seq1  AGCATCAGGAGAGGTCAAGGGCAGTGTTGACAAAGATGATGGTCCACTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGGAGAGGTCAAGGGCAGTGTTGACAAAGATGATGGTCCACTGA  544

seq1  GCTGTAGGCTTGACTGTTTTCTTTTTTTGTAACTTTGGAAAAGCCTATAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGCTTGACTGTTTTCTTTTTTTGTAACTTTGGAAAAGCCTATAG  594

seq1  TTCTTCCACTTACAGAAAAAGATGTGGTCAGTAATTATGAGAATACGAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCACTTACAGAAAAAGATGTGGTCAGTAATTATGAGAATACGAAA  644

seq1  CATTTTTTAGAACTTGAACATAAGGGAAGAGGTGGGTAGTTTTATTGTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTAGAACTTGAACATAAGGGAAGAGGTGGGTAGTTTTATTGTTA  694

seq1  TGTATCATAAGCATCACCCAGGGATAGGCAAATGCATGTATTTTATACTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATAAGCATCACCCAGGGATAGGCAAATGCATGTATTTTATACTC  744

seq1  ATAGTTTGCTATTGTTGGAAGCCTCATGAAATCACTTTCTTGAATGTATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTGCTATTGTTGGAAGCCTCATGAAATCACTTTCTTGAATGTATA  794

seq1  TGTTTTGTTGTTGTTCAGTAGAGAGGCAGAGTATTCCTGAGCACTAAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTGTTGTTCAGTAGAGAGGCAGAGTATTCCTGAGCACTAAAAC  844

seq1  AGGTAGCATCAGAGGTTGTAGTTCTTCACCCTGTTAACCGGAGCAATTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCATCAGAGGTTGTAGTTCTTCACCCTGTTAACCGGAGCAATTTT  894

seq1  GTATCTAATCCCGTAGTACTGTCCTAACCTGCCTTACTGAACTTGCCTAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAATCCCGTAGTACTGTCCTAACCTGCCTTACTGAACTTGCCTAT  944

seq1  AAATACCGATATTTCCAATAGCTATTTGGGCTGTTTTAACACCTCATGTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCGATATTTCCAATAGCTATTTGGGCTGTTTTAACACCTCATGTT  994

seq1  TCTCTTAGTAATTAATTAGTTGAATAAAGCTTTGACATATGTTCATTTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGTAATTAATTAGTTGAATAAAGCTTTGACATATGTTCATTTTG  1044

seq1  CATGTTCCAGGGAATTATTATTTTACATTTTTGAAAATTATACCTTAACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCCAGGGAATTATTATTTTACATTTTTGAAAATTATACCTTAACA  1094

seq1  ACAGAAAGGAATTC  1112
      ||||||||||||||
seq2  ACAGAAAGGAATTC  1108