BAC Information

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BAC

Clone NameB6Ng01-021A05
Chromosome2 (Build37)
Map Location 89,854,563 - 89,855,109
singlet/doubletsinglet
Overlap geneOlfr1263
Upstream geneOlfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262
Downstream geneOlfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik, Nup160, Fnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021A05.bB6Ng01-021A05.g
ACCDH853643DH853644
length5411,018
definitionDH853643|Mus musculus domesticus DNA, BAC clone: B6Ng01-021A05, 5' end.DH853644|Mus musculus domesticus DNA, BAC clone: B6Ng01-021A05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgtgacattgctcatttttccccatcaatttagtacagcctctgtgcata
tggtcatctgaaaagaaaccatagggtgtctcagtgagtgatgatattta
acatgaaacactgaagtactgtatcatcttattacttctggtctttgtgg
tctatgtagctgcatttcttctcagtatcacatcccatgcagctataaaa
tcagatttgataggttggataattcctaatgggttttaatggaagagtga
caggaccttacatacattgcaagaactctttttctcttaatgggttgcat
tgtccagtccctctatgagggctttcaccttgccttattgtatcttgttt
tgtcatacttaggtgtcatcacttggaggtttgatcttttctgaagaaga
aacagaagggaagtagaacttggagagaagggaggttgtaaggaggcagg
aggagtgaagggaaggaaacctggtagggatgaattgactgagagaagaa
tctattttcaaataggaggaggaggaggaggaagaggaaga
gaattccacacccctaagccccttaccccataaaaacccctagccttcaa
gccttgtggcctacatctgttatctcctgtgtgggatagtccttcgtgat
tttttgggtgcatgccgaatcgggagatgggtggggtttccccactaggt
tctatcatctctatcttggtaatggggagaccccagcatgttggacttgt
gcagaataaaacactctgtgtttacatactatttgaatccagggtaccat
tcttcagtgaatcatggacccttactgtggcaggatattccctgcccaat
ctatttaattattagtgcagcaggaggcctgtgattggacagagaaaaag
gaggtggagctaagagtgtcaggtacagagagctacagaagaaagggagg
gagcaagatggaggatggacaggaagaagatcttgaccccacatggtttt
aaatagccacaggtagttatgaatatcatacagggatagaataactggga
taacttgcctgatctaggtgggcagcttgtaccattatcagctagccctg
aaattattgtatgggcatcttgtaaattgagaatttaatgatatataaat
ttgactggtcaattacaagcttcaagagtttcattttactgggtttactg
gaaggtgggaccgacgatcccaaggagattatggctgagaaggtagaagt
tgcactgagacagtgaactggagctgggaagacagtgatctgtcactgca
tgggctaaccgtggacacaacagagttgggtgggcagagagtagctggat
gaagtgcaggacttagcagttctttttaatatatcccataactccttaca
atactacaatattggtctttatactttgatagctggcccttgctagtcag
cctcagaggagaatggctaaataagagactgcagtagctcatgatgtaac
tatgggttattaagcaagagaattgatgtgaaggaagtctgctgtgaagg
tttgcatactaatatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89854563_89855109
seq2: B6Ng01-021A05.b_44_590 (reverse)

seq1  TCTTCCTCTTCCTCCTCCTCCTCCTCCTATTTGAAAATAGATTCTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTTCCTCCTCCTCCTCCTCCTATTTGAAAATAGATTCTTCTCT  50

seq1  CAGTCAATTCATCCCTACCAGGTTTCCTTCCCTTCACTCCTCCTGCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAATTCATCCCTACCAGGTTTCCTTCCCTTCACTCCTCCTGCCTCC  100

seq1  TTACAACCTCCCTTCTCTCCAAGTTCTACTTCCCTTCTGTTTCTTCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACCTCCCTTCTCTCCAAGTTCTACTTCCCTTCTGTTTCTTCTTCA  150

seq1  GAAAAGATCAAACCTCCAAGTGATGACACCTAAGTATGACAAAACAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATCAAACCTCCAAGTGATGACACCTAAGTATGACAAAACAAGAT  200

seq1  ACAATAAGGCAAGGTGAAAGCCCTCATAGAGGGACTGGACAATGCAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGGCAAGGTGAAAGCCCTCATAGAGGGACTGGACAATGCAACCC  250

seq1  ATTAAGAGAAAAAGAGTTCTTGCAATGTATGTAAGGTCCTGTCACTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAGAAAAAGAGTTCTTGCAATGTATGTAAGGTCCTGTCACTCTTC  300

seq1  CATTAAAACCCATTAGGAATTATCCAACCTATCAAATCTGATTTTATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAACCCATTAGGAATTATCCAACCTATCAAATCTGATTTTATAGC  350

seq1  TGCATGGGATGTGATACTGAGAAGAAATGCAGCTACATAGACCACAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGGATGTGATACTGAGAAGAAATGCAGCTACATAGACCACAAAGA  400

seq1  CCAGAAGTAATAAGATGATACAGTACTTCAGTGTTTCATGTTAAATATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGTAATAAGATGATACAGTACTTCAGTGTTTCATGTTAAATATCA  450

seq1  TCACTCACTGAGACACCCTATGGTTTCTTTTCAGATGACCATATGCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACTGAGACACCCTATGGTTTCTTTTCAGATGACCATATGCACAG  500

seq1  AGGCTGTACTAAATTGATGGGGAAAAATGAGCAATGTCACAGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTACTAAATTGATGGGGAAAAATGAGCAATGTCACAGAATTC  547