BAC Information

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BAC

Clone NameB6Ng01-021E02
Chromosome2 (Build37)
Map Location 33,513,194 - 33,660,802
singlet/doubletdoublet
Overlap gene2610528K11Rik
Upstream geneEng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918
Downstream geneLOC100041931, Pbx3, LOC665948, Mapkap1, LOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021E02.bB6Ng01-021E02.g
ACCDH853811DH853812
length764860
definitionDH853811|Mus musculus domesticus DNA, BAC clone: B6Ng01-021E02, 5' end.DH853812|Mus musculus domesticus DNA, BAC clone: B6Ng01-021E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,513,194 - 33,513,956)(33,659,943 - 33,660,802)
sequence
gaattctcaccagctaagccacattccagccccgtgtaaatctttatttc
cagacaggattttactgtgtagcccaggctgctctgaaactgacagcaat
ccttctgcctcagcctcttgagtggccagggttacaggtgtgagccacga
gcgaggtcgtgctaccaagaatttgagacaacagcacacaacatgagcag
aggttatttttttccccagtagtttatgtgtttgcttttctgtgccttct
ggggatgtcccgtgatgcagtcaagattcccacaatttagcatatggatg
aatgaccctgcaactaggttaccaactcaccataataaacttgtacttct
ttgtttacgtttcacttttgatagttgggatttcttttcaaacacttaat
atttaataagttgatggtagccagttgtggtggcgcactcctttaatccc
agcacttgggaggcagaggcaggcagatttctgaggccagcctggtctac
aaagtgagttttaggacagccagggctatacagagaaaccttgtctcgaa
aaacaaaaacaaaacaaaacaaaaagaaagaaaagaaaagaaaagaaaag
aaaagaaaagaaaagaaaagttaagttgatggtgcatagaatgagtgcct
gggtttcaagtcaaggcagccttgggtcaactacatagttgccctgtctg
gcactggacatctctgcctatagtttagcatcccagggcagttccccgac
tgcgagctcttaca
gaattcttggggtgggttatctcttctagggtgatcaaagcggctatagg
tgacgcagcctggccggctataggtaaggcagcctggcctacagaagcct
ctgcagaggacggagcaagtgcagaggcctggagcagttctgaaagccac
agggacagggcacaaaaggctgaagctggaattggccaatgtgggggtgt
gggctgggctaagccgacaagacctcacagccatgggattcagtttaaga
cagaggaaattccccagtgggtttgcattggctccactctcaagctctca
ggagccaggctctaggatggctaaggaagaaagggttgattttgggctca
cactttgaggatatagtctatcctggtggggaaggcatgaggacaggggc
tgaggcagctggtcacattgtgtccacagtcaggaagcgcagaaagatgg
cccgagcgctcagcttgcttcctcctgattgtttgggcagggacccactg
ccgtggggcgttgctatagggcttcccaactcagcctggtctaaaaactc
ccgtcctgccatgcccagagacttgtttctgtggagattctaaatcccac
caacttgacaagatcaaccctcgcgccaacttaagggttcacctggttct
aacgtgacacttgtttgcatcacgacctgtatctgctggcagatgacatg
tctctccagaggccacccagctcccaggtgctagcattgagactggatcc
catatccagtgagtgaactgtggagggcagtgtcctcacccacagagggc
caggccacttgcttgtcccctgtgtacgtgcactggcctcctgctggggt
gctatggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_33513194_33513956
seq2: B6Ng01-021E02.b_44_807

seq1  GAATTCTCACCAGCTAAGCCACATTCCAGCCCCGTGTAAATCTTTATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCAGCTAAGCCACATTCCAGCCCCGTGTAAATCTTTATTTC  50

seq1  CAGACAGGATTTTACTGTGTAGCCCAGGCTGCTCTGAAACTGACAGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGGATTTTACTGTGTAGCCCAGGCTGCTCTGAAACTGACAGCAAT  100

seq1  CCTTCTGCCTCAGCCTCTTGAGTGGCCAGGGTTACAGGTGTGAGCCACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCCTCAGCCTCTTGAGTGGCCAGGGTTACAGGTGTGAGCCACGA  150

seq1  GCGAGGTCGTGCTACCAAGAATTTGAGACAACAGCACACAACATGAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGTCGTGCTACCAAGAATTTGAGACAACAGCACACAACATGAGCAG  200

seq1  AGGTTATTTTTTTCCCCAGTAGTTTATGTGTTTGCTTTTCTGTGCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATTTTTTTCCCCAGTAGTTTATGTGTTTGCTTTTCTGTGCCTTCT  250

seq1  GGGGATGTCCCGTGATGCAGTCAAGATTCCCACAATTTAGCATATGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGTCCCGTGATGCAGTCAAGATTCCCACAATTTAGCATATGGATG  300

seq1  AATGACCCTGCAACTAGGTTACCAACTCACCATAATAAACTTGTACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCCTGCAACTAGGTTACCAACTCACCATAATAAACTTGTACTTCT  350

seq1  TTGTTTACGTTTCACTTTTGATAGTTGGGATTTCTTTTCAAACACTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTACGTTTCACTTTTGATAGTTGGGATTTCTTTTCAAACACTTAAT  400

seq1  ATTTAATAAGTTGATGGTAGCCAGTTGTGGTGGCGCACTCCTTTAATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAAGTTGATGGTAGCCAGTTGTGGTGGCGCACTCCTTTAATCCC  450

seq1  AGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGGCCAGCCTGGTCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGGCCAGCCTGGTCTAC  500

seq1  AAAGTGAGTTTTAGGACAGCCAGGGCTATACAGAGAAACCTTGTCTCGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGTTTTAGGACAGCCAGGGCTATACAGAGAAACCTTGTCTCGAA  550

seq1  AAACAAAAACAAAACAAAACAAAAAGAAAGAAAAGAAAAGAAAAGAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAACAAAACAAAACAAAAAGAAAGAAAAGAAAAGAAAAGAAAAG  600

seq1  AAAAGAAAAGAAAAGAAAAGTTAAGTTGATGGTGCATAGAAGGAGTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAAGAAAAGAAAAGAAAAGTTAAGTTGATGGTGCATAGAATGAGTGCCT  650

seq1  GGGTTTCAAGTCAAGGCAGCCTTTGGTCATCTTCTTAGTTGCCCTGTCTG  700
      ||||||||||||||||||||||| ||||| || | |||||||||||||||
seq2  GGGTTTCAAGTCAAGGCAGCCTTGGGTCAACTACATAGTTGCCCTGTCTG  700

seq1  GCACTGGACATCTCTGCCCATAG-TTAGCAGTCCAGGGCAGTTCCCAGAC  749
      |||||||||||||||||| |||| ||||||  |||||||||||||| |||
seq2  GCACTGGACATCTCTGCCTATAGTTTAGCATCCCAGGGCAGTTCCCCGAC  750

seq1  TGCGAGCTCTCACA  763
      |||||||||| |||
seq2  TGCGAGCTCTTACA  764

seq1: chr2_33659943_33660802
seq2: B6Ng01-021E02.g_67_926 (reverse)

seq1  CTACCATAGCACCCCAGCAGGCGG-CAGTGCACGGTACACAGGTGGAC-A  48
      ||||||||||||||||||||| || |||||||| ||||||||| |||| |
seq2  CTACCATAGCACCCCAGCAGGAGGCCAGTGCAC-GTACACAGG-GGACAA  48

seq1  GCTAGTGGCCTGGCCCTCTGTGGGTGAGGACACTGCCCTCCACAGTTCAC  98
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGGCCTGGCCCTCTGTGGGTGAGGACACTGCCCTCCACAGTTCAC  98

seq1  TCACTGGATATGGGATCCAGTCTCAATGCTAGCACCTGGGAGCTGGGTGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGATATGGGATCCAGTCTCAATGCTAGCACCTGGGAGCTGGGTGG  148

seq1  CCTCTGGAGAGACATGTCATCTGCCAGCAGATACAGGTCGTGATGCAAAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGAGAGACATGTCATCTGCCAGCAGATACAGGTCGTGATGCAAAC  198

seq1  AAGTGTCACGTTAGAACCAGGTGAACCCTTAAGTTGGCGCGAGGGTTGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCACGTTAGAACCAGGTGAACCCTTAAGTTGGCGCGAGGGTTGAT  248

seq1  CTTGTCAAGTTGGTGGGATTTAGAATCTCCACAGAAACAAGTCTCTGGGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCAAGTTGGTGGGATTTAGAATCTCCACAGAAACAAGTCTCTGGGC  298

seq1  ATGGCAGGACGGGAGTTTTTAGACCAGGCTGAGTTGGGAAGCCCTATAGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGGACGGGAGTTTTTAGACCAGGCTGAGTTGGGAAGCCCTATAGC  348

seq1  AACGCCCCACGGCAGTGGGTCCCTGCCCAAACAATCAGGAGGAAGCAAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCCCACGGCAGTGGGTCCCTGCCCAAACAATCAGGAGGAAGCAAGC  398

seq1  TGAGCGCTCGGGCCATCTTTCTGCGCTTCCTGACTGTGGACACAATGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGCTCGGGCCATCTTTCTGCGCTTCCTGACTGTGGACACAATGTGA  448

seq1  CCAGCTGCCTCAGCCCCTGTCCTCATGCCTTCCCCACCAGGATAGACTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCCTCAGCCCCTGTCCTCATGCCTTCCCCACCAGGATAGACTAT  498

seq1  ATCCTCAAAGTGTGAGCCCAAAATCAACCCTTTCTTCCTTAGCCATCCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAAAGTGTGAGCCCAAAATCAACCCTTTCTTCCTTAGCCATCCTA  548

seq1  GAGCCTGGCTCCTGAGAGCTTGAGAGTGGAGCCAATGCAAACCCACTGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGGCTCCTGAGAGCTTGAGAGTGGAGCCAATGCAAACCCACTGGG  598

seq1  GAATTTCCTCTGTCTTAAACTGAATCCCATGGCTGTGAGGTCTTGTCGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCCTCTGTCTTAAACTGAATCCCATGGCTGTGAGGTCTTGTCGGC  648

seq1  TTAGCCCAGCCCACACCCCCACATTGGCCAATTCCAGCTTCAGCCTTTTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCAGCCCACACCCCCACATTGGCCAATTCCAGCTTCAGCCTTTTG  698

seq1  TGCCCTGTCCCTGTGGCTTTCAGAACTGCTCCAGGCCTCTGCACTTGCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGTCCCTGTGGCTTTCAGAACTGCTCCAGGCCTCTGCACTTGCTC  748

seq1  CGTCCTCTGCAGAGGCTTCTGTAGGCCAGGCTGCCTTACCTATAGCCGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCTCTGCAGAGGCTTCTGTAGGCCAGGCTGCCTTACCTATAGCCGGC  798

seq1  CAGGCTGCGTCACCTATAGCCGCTTTGATCACCCTAGAAGAGATAACCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGCGTCACCTATAGCCGCTTTGATCACCCTAGAAGAGATAACCCA  848

seq1  CCCCAAGAATTC  860
      ||||||||||||
seq2  CCCCAAGAATTC  860