BAC Information

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BAC

Clone NameB6Ng01-021O18
Chromosome2 (Build37)
Map Location 153,810,600 - 153,811,688
singlet/doubletsinglet
Overlap geneEG545477
Upstream geneTtll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1, EG329541, LOC100043869, Spag4l, Bpil1, Bpil3, Rya3, LOC100043870, Gm1006
Downstream genePsp, LOC100043652, 1700058C13Rik, Plunc, 2310021H06Rik, U46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021O18.bB6Ng01-021O18.g
ACCDH854298DH854299
length1,075984
definitionDH854298|Mus musculus domesticus DNA, BAC clone: B6Ng01-021O18, 5' end.DH854299|Mus musculus domesticus DNA, BAC clone: B6Ng01-021O18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgatctgggagatggcagtgggacaatcccaacttctatgac
tgttacttcacctgagatctctacaatgtccctgggtgagcttaatcaac
ctgagatgaacatcccaggaggcttggacacaagtggcattaccagccaa
gtatccttcagctgggtccaaagagtatcaccagtcctggccaccacagg
ccaccaaaggctgccacagatgctcaagagagtctagcttcttgatggtg
ggtgtcatgagctttatatttaggacgtgcttccaggtctgaggtggtag
ttctggttagtatagggctgtgtcacctggtggctcaggtccatctgaag
caaggtcaaccaataatcagccttgaactgggtcatctggtgatgtggat
caatatgaacagttttaacaaatggttggactgataataggtcatttggg
ttgctatggtcaaggtagtactgggtcagtcttctggaagattttatcag
gatcaataaaagtccactatggctttaggtcatgtaatgggtttgaagga
aagtcaatggatagtcagtttgaggctgagttatctgggggcttagtcag
tctgaaacaggaatctagctttagttcacccaatggccatgaccaattta
gactaatgaccactccacagtcatgattagtctaggtttaaggtatcttt
tacctctgattcctctgactgtaggttgcataatggtttatgtcaagtct
gaggcaaggccattcttatgttagaaattaaaacaggctcattaaaaggc
gctgccaggaatctacctttgaatgagttttataaggagagttacaggct
tgtcaccataggcagccatgacaagtccctgacgtgggacaacatgttgg
agagagttgatcattttggccataagcatccatatggagtctgaagggag
aatgggccattccttcacacccataagacaaagtgttttctgccttacag
attttcagggtgggagttgtagcttcacatgattgctgcctgtctagggc
catgctgggaagattgaaaaatgaa
gaattctctgtttagttttatacccaaattttaaaaattgggctatttgg
gatgttggtttctaatttcttgagttctttatatattttggatattagtc
ctctgacagatgtagggttggtgaagatcctttgccaattggtaggttgc
cgctttgtcctattgacagaatcctttgtcttatagaagcttttcagttt
catgagatcccatttatcaattgttgatcttagagcctgagccactggtg
ttctgttcaggaagttgtctcctgtaccaatgagttcaaggcacttcccc
actttctgatctattagatttagtgtatctggttctatgttgagatcttt
gatctacttggactcgagttttgtgatagatatggatctatttgtattcc
tctacatgctgacacccaattagaccagcactatttgttaaagatgcttt
cttttttccagatatagatatagatatagatatagatatagatatagata
tagatatagattgccacaaacagacctctttttgggtctcctatctgtgc
cgaatgggtctctggttgcaggtgggagaaggagtcggcaaaagtggggt
gacaaacagacacaacacgagagagtgtgttgaatctgagtgtaatgtcc
aaacaaaaaacagacttttttatacagaatcaaaaaacaagaaaagccag
gtgggacacatctgccgagttacattgacacaaaacaaaaggaatgtata
catcaaaagatggcatggaccaagccgttgtttaccactaagaatggagc
caggtgtaatgctggtctattgttaagcccaccaccaggggttctagtaa
atgcctgattatgctttctttggcctagtgaagaaacctgtccaagttcc
aggagctgaatttccttgaactcttggctcttgactgcctcaggccttta
gactttgatagcagattcactggaagttggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_153810600_153811688
seq2: B6Ng01-021O18.b_43_1117

seq1  GAATTCATTGATCTGGGAGATGGCAGTGGGACAATCCCAACTTCTATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGATCTGGGAGATGGCAGTGGGACAATCCCAACTTCTATGAC  50

seq1  TGTTACTTCACCTGAGATCTCTACAATGTCCCTGGGTGAGCTTAATCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTCACCTGAGATCTCTACAATGTCCCTGGGTGAGCTTAATCAAC  100

seq1  CTGAGATGAACATCCCAGGAGGCTTGGACACAAGTGGCATTACCAGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGAACATCCCAGGAGGCTTGGACACAAGTGGCATTACCAGCCAA  150

seq1  GTATCCTTCAGCTGGGTCCAAAGAGTATCACCAGTCCTGGCCACCACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTTCAGCTGGGTCCAAAGAGTATCACCAGTCCTGGCCACCACAGG  200

seq1  CCACCAAAGGCTGCCACAGATGCTCAAGAGAGTCTAGCTTCTTGATGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAAGGCTGCCACAGATGCTCAAGAGAGTCTAGCTTCTTGATGGTG  250

seq1  GGTGTCATGAGCTTTATATTTAGGACGTGCTTCCAGGTCTGAGGTGGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCATGAGCTTTATATTTAGGACGTGCTTCCAGGTCTGAGGTGGTAG  300

seq1  TTCTGGTTAGTATAGGGCTGTGTCACCTGGTGGCTCAGGTCCATCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTAGTATAGGGCTGTGTCACCTGGTGGCTCAGGTCCATCTGAAG  350

seq1  CAAGGTCAACCAATAATCAGCCTTGAACTGGGTCATCTGGTGATGTGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCAACCAATAATCAGCCTTGAACTGGGTCATCTGGTGATGTGGAT  400

seq1  CAATATGAACAGTTTTAACAAATGGTTGGACTGATAATAGGTCATTTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGAACAGTTTTAACAAATGGTTGGACTGATAATAGGTCATTTGGG  450

seq1  TTGCTATGGTCAAGGTAGTACTGGGTCAGTCTTCTGGAAGATTTTATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATGGTCAAGGTAGTACTGGGTCAGTCTTCTGGAAGATTTTATCAG  500

seq1  GATCAATAAAAGTCCACTATGGCTTTAGGTCATGTAATGGGTTTGAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATAAAAGTCCACTATGGCTTTAGGTCATGTAATGGGTTTGAAGGA  550

seq1  AAGTCAATGGATAGTCAGTTTGAGGCTGAGTTATCTGGGGGCTTAGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAATGGATAGTCAGTTTGAGGCTGAGTTATCTGGGGGCTTAGTCAG  600

seq1  TCTGAAACAGGAATCTAGCTTTAGTTCACCCAATGGCCATGACCAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACAGGAATCTAGCTTTAGTTCACCCAATGGCCATGACCAATTTA  650

seq1  GACTAATGACCACTCCACAGTCATGATTAGTCTAGGTTTAAGGTATCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATGACCACTCCACAGTCATGATTAGTCTAGGTTTAAGGTATCTTT  700

seq1  TACCTCTGATTCCTCTGACTGTAGGTTGCATAATGG-TTATGTCAAGTCT  749
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TACCTCTGATTCCTCTGACTGTAGGTTGCATAATGGTTTATGTCAAGTCT  750

seq1  GAGGCAAGGCCATTCTTATGTTAGAAATTAAAACAGGCTCATTAAAAGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAGGCCATTCTTATGTTAGAAATTAAAACAGGCTCATTAAAAGGC  800

seq1  GCTGCCAGGAATCTACCTTTGAATGAGTTTTATAAGGAGAGTTACAGGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAGGAATCTACCTTTGAATGAGTTTTATAAGGAGAGTTACAGGCT  850

seq1  TGTCACCATAGGCAGCCATGACAAGTCCCTGACGTGGGACAACATGTTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCATAGGCAGCCATGACAAGTCCCTGACGTGGGACAACATGTTGG  900

seq1  AGAGAGTTGATCATTTTGGCCATAAGCATCCATAATGGAGTCTTGAAGGG  949
      ||||||||||||||||||||||||||||||||| |||||||| |||||||
seq2  AGAGAGTTGATCATTTTGGCCATAAGCATCCAT-ATGGAGTC-TGAAGGG  948

seq1  AGAATGGGCCATTCCTTCACACCCATAAGACAAAAGTGTTTTCTGCCTTA  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGAATGGGCCATTCCTTCACACCCATAAGAC-AAAGTGTTTTCTGCCTTA  997

seq1  CAGATTTTCAGGGGTGGAGTTTGTAAGCTTCACATGACTTGGCCTTGCTT  1049
      |||||||||||||  |||| |||| |||||||||||| |||    ||| |
seq2  CAGATTTTCAGGGTGGGAG-TTGT-AGCTTCACATGA-TTG---CTGCCT  1041

seq1  GTCTAGGTGCCAGTGTCTGGGAAGCATTGATAAAAATGAA  1089
      ||||||| |||| || |||||||| ||||  |||||||||
seq2  GTCTAGG-GCCA-TG-CTGGGAAG-ATTG--AAAAATGAA  1075