BAC Information

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BAC

Clone NameB6Ng01-022I15
Chromosome2 (Build37)X (Build37)
Map Location 142,776,238 - 142,776,756159,109,920 - 159,110,481
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022I15.bB6Ng01-022I15.g
ACCDH854721DH854722
length992901
definitionDH854721|Mus musculus domesticus DNA, BAC clone: B6Ng01-022I15, 5' end.DH854722|Mus musculus domesticus DNA, BAC clone: B6Ng01-022I15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,238 - 142,776,756)(159,109,920 - 159,110,481)
sequence
gaattctttgtttagctctgagccccattttttaatggggttatctaatt
ttctggagtccaccttcttcagttctttatatatattagatattagtccc
ctatctgatttaggataggtaaacttcctttcccagtctgttggtggcct
ttttgtcttattgacagtgtcctttgccttacagaatatttgcaatttta
tgagaccctgtttatcgattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgaacccatatcttcgaggctttcccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttatatttgaccttagtacaaggagatagaaatggatcaattctc
attcttctgcatgataaccaccagttgtgccagcaccattttttgaaaat
gctgtcttttttccactggatggtttttgctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatctcagggtctacaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattctaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcagatttgctctttctaattcattgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttattatattgatcctgactatccatgagcaagggagatctttccatct
tctgagatcttctttaattcttcttcagagacttgaagtctaacatacag
atcttcacttccttagttagagcacgccaggtatttatattatttgtgac
attgagaagggtgtggtatccctatttctttctcagcctgtt
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcgtgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggtt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
ttcttcaggatctgttgttatgtctcccttttcatttctgatttttgtta
attaggactttgtccctgtgcctttagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcctttggttaattctttg
atagttcttctgtttccacttggttgatttcaccccggagtttgatattt
cctgcctctactcctctgggtgaatttgctcctttttcagggcttttaga
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776238_142776756
seq2: B6Ng01-022I15.b_524_1033 (reverse)

seq1  AACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACA  50
      |||||||||||||||||| |||||| || |||||||||||||| ||||||
seq2  AACAGGCTGAGAAAGAAA-TAGGGATACCACACCCTTCTCAAT-GTCACA  48

seq1  AATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCT  100
      |||||||| ||||| || |||||| ||||||||||||||||| |||||||
seq2  AATAATAT-AAATACCT-GGCGTG-CTCTAACTAAGGAAGTG-AAGATCT  94

seq1  GTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCA  150
      ||||| |  | |||||||||||||||||||   |||||||||||||||||
seq2  GTATGTT--AGACTTCAAGTCTCTGAAGAA--GAATTAAAGAAGATCTCA  140

seq1  GAAGATGGAAGGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTA  200
      |||||||||| |||||||| ||||||||||| | ||||||||| ||  ||
seq2  GAAGATGGAAAGATCTCCCTTGCTCATGGATAGTCAGGATCAATATAATA  190

seq1  AAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCAT  240

seq1  CAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGC-AATTTGCAAA  299
      |||||||||||||||||||||||| ||||||||| |||| ||| ||||||
seq2  CAAAATTCCAACTCAATTCTTCAATGAATTAGAAAGAGCAAATCTGCAAA  290

seq1  TTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGA  349
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGGA  340

seq1  TAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACA  399
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  TAAAAGAACCTCTGGTAGAATCACCATGCCTGACCTAAAGCTGTACTACA  390

seq1  GAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTA  449
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAAGTA  440

seq1  GACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGG  499
      ||||||||||| ||||||| |||||| || ||||||||||||||||||||
seq2  GACCAATGGAACAGAATTGTAGACCCTGAGATGAACCCACACACCTATGG  490

seq1  TCACTTGATCTTCGACAAGG  519
      |||||||||||| |||||||
seq2  TCACTTGATCTTTGACAAGG  510

seq1: chrX_159109920_159110481
seq2: B6Ng01-022I15.g_412_965 (reverse)

seq1  ATCTAAAAGCCCTAGAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGA  50
      ||||||||||||| ||||||   | ||||||||||||| |||||||||||
seq2  ATCTAAAAGCCCT-GAAAAA---GGAGCAAATTCACCC-AGAGGAGTAGA  45

seq1  CGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAG  100
       |||||||||| ||||||||| ||||||||||||||||||||||||| ||
seq2  -GGCAGGAAAT-ATCAAACTCCGGGGTGAAATCAACCAAGTGGAAAC-AG  92

seq1  AAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAA  150
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  AAGAACTA-TCAAAGAATTAACCAAAGGAGGAGTTGGTTCTTTGAGAAAA  141

seq1  TCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGAC  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAA-GGCACAGGGAC  190

seq1  AAAATCCTAATTAAC-AAAATCAGAAATGAAAAGGGAGACATAACAACAG  249
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTAATTAACAAAAATCAGAAATGAAAAGGGAGACATAACAACAG  240

seq1  ATCCTGAAG-AAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATA  298
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAAGAAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATA  290

seq1  CTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGAT  340

seq1  ACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCC  390

seq1  ATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAAA  440

seq1  AAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAG  490

seq1  AAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAA  540

seq1  GGTACTCTACCCAA  562
      ||||||||||||||
seq2  GGTACTCTACCCAA  554