BAC Information

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BAC

Clone NameB6Ng01-022O10
Chromosome2 (Build37)2 (Build37)
Map Location 47,084,592 - 47,085,3299,328,295 - 9,329,344
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022O10.bB6Ng01-022O10.g
ACCDH854975DH854976
length8311,041
definitionDH854975|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O10, 5' end.DH854976|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(47,084,592 - 47,085,329)(9,328,295 - 9,329,344)
sequence
gaattccattaaggaaggtgcttaaaaaaaaaagaaaagaaaagaaaaga
aaagaaaagaaacaaggtttataatttagaaaacagtagctgtttaaaca
agtatctaagttatgtgtatggccacttgcttgtaacctccaatgcttgg
gtggtaacagtgggagcaacaaagatgagttctaggtcagcctgagctac
tcaaggaattccaggttaacctgagcaacacagggagtccctgtctcaga
ttccaagccaacaagtcaacaaacaaatcaaactatatacaaagtaatgg
gtttcatcactgtgtctctttttttttattctctgaataatttttataaa
tttttaattaggtattttcttcatttacatttcaaatgttatcccaagag
tcccccataccctcccccccccaactcctctctctcctcccccctctccc
acttcttggccctggcgttcccctgtactgaggcatataaagtttgcaag
gccaaggggcctctcttcccaatgatggccgactaggccatcttttgata
catatgcagctagagacacgagctctggggggtactggttagttcatatt
gttgttccacctatagggtttgcagatccctttagctccttgggtacttt
ctctagctcctccatttggaggccctgtgttccatccaatagctgactgt
gagcatccacttcttgttttgcaaggcaccagcatatcctcacaagagac
agctatatcagggtcctttcagcaaaatcttgctagtgtatgtaatggtg
tcagtgtttggaggctgaatatgggatggat
gaattctttcaggtcatatatgcactttcttatttcattaatctgtctgg
gttcactttgaattgattcaggagttgtgttcattccaaacgtatattac
actcacatgtaccaggttgtctgttgtgctgtccagagtttgtctcagct
gtccctcaaagccaccatggggaccttagctgctctgaaggccaaatttt
tctcacccactagcaagtcacagggagagaagtgactaaaaacccagagc
cttgggtcagtctggtaggtgaagacaaaagacaccctgcataccaaacc
cagaggctgtttgtcctgcttcaagtcttagcagatgagaactaaagggc
aggaatagaacaggtttgtgaagattgtgatcagagtcaaagttggttct
tctgccatatttgagtgttgccatgtgtaaaataaagtctacagacaccc
accacaaccagtaaaagagtagtacagtgtggactaagacattagttctt
cagggttggaacagaaagtggataattggagcaagagcagaattattcaa
ggaatatagaaagcatagaaacggggaaagttggtaaaccatgaaaagat
gaggataaagtgggagaatagatgtgaccattccagctaaaggtagaatg
agaagagaaacaggaaaggaaactcagtgaacaaccctatcacttgggat
actgaaacagtcagacacccccaactccatgccgagctctgacaaagctt
gtcacaaagaggagagaataacagacaagacaacatggttccactaaatt
gaaactatctgctaaataagaaagattcaaaaaactaaaggaatgaaaac
tgggtgaaggggaatctatatgcagtcctactgtagcacagatactactc
accttcaccagtccctagtggctatatcatcaaacccatctcatacagtc
tactccagtttatggctcatccagatttctacctcacagaacactgcata
gtctgatcaacattttctctctatagacacctagccaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47084592_47085329
seq2: B6Ng01-022O10.b_488_874

seq1  TCTCCCACTTCTAAGATTGTGAGCTTCTACGCTTGTATAATATTAAATTC  50
                                                        
seq2  --------------------------------------------------  0

seq1  TAGAATCTAACTATGAGAAAAAATGTATTATATTTTTCTGATTATAGCAT  100
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTCTCTTAACAAAATGATCTCTTTTCCCCATAATTTCCTGCAAGGGCA  150
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTTCTTTGTGACTAAATAAAACTCCACTAGACAACAGCATTCTATTT  200
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTCTGTATACACTTTTTACAGTGGCATTCTTTTTTTTTTATTCATTCT  250
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTTTTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTC  300
                                                        
seq2  --------------------------------------------------  0

seq1  CAATGCTATACCAAAAGTCCCCCTTACCCACCCACCCCCACTCCCCTACC  350
                                                        
seq2  --------------------------------------------------  0

seq1  CACCCACTCCCCCCCT--TTGGCCCTGGCGTTCCCCTGTACCGGGGCACA  398
             || ||| ||  ||||||||||||||||||||||| | |||| |
seq2  -------TCTCCCACTTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATA  43

seq1  CAAAGTCTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGG  448
       ||||| |||  | |||| ||||||||||| ||| |||||||||||||||
seq2  TAAAGTTTGCAAGGCCAAGGGGCCTCTCTTCCCAATGATGGCCGACTAGG  93

seq1  CCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTC--AGGGGTACTG  496
      |||||||||||||||||||||||||||| || ||||||   |||||||||
seq2  CCATCTTTTGATACATATGCAGCTAGAGACACGAGCTCTGGGGGGTACTG  143

seq1  GTTAGTTCATAATGTTGTTCCACCTATAGGG-TTGAAGATCCCTTTAGCT  545
      ||||||||||| ||||||||||||||||||| ||| ||||||||||||||
seq2  GTTAGTTCATATTGTTGTTCCACCTATAGGGTTTGCAGATCCCTTTAGCT  193

seq1  CCTTGGGTACTTTCTCTAGCTCCTCCATTGGGA-GCCCTGTGATCCATCC  594
      ||||||||||||||||||||||||||||| ||| |||||||| |||||||
seq2  CCTTGGGTACTTTCTCTAGCTCCTCCATTTGGAGGCCCTGTGTTCCATCC  243

seq1  ATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAG  644
      | |||||||||||||||||||||||||   ||||| |||| || ||||| 
seq2  AATAGCTGACTGTGAGCATCCACTTCTTGTTTTGCAAGGCACCAGCATAT  293

seq1  TCTCACAAGAGACAGCTACATCTGGGTCCTTTCAGTAAAATCTTGCTAGT  694
       ||||||||||||||||| ||| |||||||||||| ||||||||||||||
seq2  CCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTAGT  343

seq1  GTATGCAATGGTGTCAGCATTTGGAAGCTGATTATGGGGTGGAT  738
      ||||| |||||||||||  |||||| ||||| |||||| |||||
seq2  GTATGTAATGGTGTCAGTGTTTGGAGGCTGAATATGGGATGGAT  387

seq1: chr2_9328295_9329344
seq2: B6Ng01-022O10.g_68_1108

seq1  GAATTCTTTCAGGTCATATATGCACTTTCTTATTTCATTAATCTGTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGGTCATATATGCACTTTCTTATTTCATTAATCTGTCTGG  50

seq1  GTTCACTTTGAATTGATTCAGGAGTTGTGTTCATTCCAAACGTATATTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTTTGAATTGATTCAGGAGTTGTGTTCATTCCAAACGTATATTAC  100

seq1  ACTCACATGTACCAGGTTGTCTGTTGTGCTGTCCAGAGTTTGTCTCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACATGTACCAGGTTGTCTGTTGTGCTGTCCAGAGTTTGTCTCAGCT  150

seq1  GTCCCTCAAAGCCACCATGGGGACCTTAGCTGCTCTGAAGGCCAAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCAAAGCCACCATGGGGACCTTAGCTGCTCTGAAGGCCAAATTTT  200

seq1  TCTCACCCACTAGCAAGTCACAGGGAGAGAAGTGACTAAAAACCCAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCCACTAGCAAGTCACAGGGAGAGAAGTGACTAAAAACCCAGAGC  250

seq1  CTTGGGTCAGTCTGGTAGGTGAAGACAAAAGACACCCTGCATACCAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTCAGTCTGGTAGGTGAAGACAAAAGACACCCTGCATACCAAACC  300

seq1  CAGAGGCTGTTTGTCCTGCTTCAAGTCTTAGCAGATGAGAACTAAAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTGTTTGTCCTGCTTCAAGTCTTAGCAGATGAGAACTAAAGGGC  350

seq1  AGGAATAGAACAGGTTTGTGAAGATTGTGATCAGAGTCAAAGTTGGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGAACAGGTTTGTGAAGATTGTGATCAGAGTCAAAGTTGGTTCT  400

seq1  TCTGCCATATTTGAGTGTTGCCATGTGTAAAATAAAGTCTACAGACACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATATTTGAGTGTTGCCATGTGTAAAATAAAGTCTACAGACACCC  450

seq1  ACCACAACCAGTAAAAGAGTAGTACAGTGTGGACTAAGACATTAGTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAACCAGTAAAAGAGTAGTACAGTGTGGACTAAGACATTAGTTCTT  500

seq1  CAGGGTTGGAACAGAAAGTGGATAATTGGAGCAAGAGCAGAATTATTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGGAACAGAAAGTGGATAATTGGAGCAAGAGCAGAATTATTCAA  550

seq1  GGAATATAGAAAGCATAGAAACGGGGAAAGTTGGTAAACCATGAAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATAGAAAGCATAGAAACGGGGAAAGTTGGTAAACCATGAAAAGAT  600

seq1  GAGGATAAAGTGGGAGAATAGATGTGACCATTCCAGCTAAAGGTAGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATAAAGTGGGAGAATAGATGTGACCATTCCAGCTAAAGGTAGAATG  650

seq1  AGAAGAGAAACAGGAAAGGAAACTCAGTGAACAACCCTATCACTTGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAAACAGGAAAGGAAACTCAGTGAACAACCCTATCACTTGGGAT  700

seq1  ACTGAAACAGTCAGACACCCCCAACTCCATGCCGAGCTCTGACAAAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACAGTCAGACACCCCCAACTCCATGCCGAGCTCTGACAAAGCTT  750

seq1  GTCACAAAGAGGAGAGAATAACAGACAAGACAACATGGTTCCACTAAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAAGAGGAGAGAATAACAGACAAGACAACATGGTTCCACTAAATT  800

seq1  GAAACTATCTGCTAAATAAGAAAGATTCAAAAAACTAAAGGAATGAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATCTGCTAAATAAGAAAGATTCAAAAAACTAAAGGAATGAAAAC  850

seq1  TGGGTGAAGGGGGAATCTATATGCAGTCCTACTGTAGGCACAGATACTAC  900
      |||||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  TGGGTGAA-GGGGAATCTATATGCAGTCCTACTGTA-GCACAGATACTAC  898

seq1  TCACCCTTCACCAGTCCCTAAGTGGCTATAATCATCAAACCCATCTCAAT  950
      ||| ||||||||||||||| ||||||||| ||||||||||||||||| ||
seq2  TCA-CCTTCACCAGTCCCT-AGTGGCTAT-ATCATCAAACCCATCTC-AT  944

seq1  ACAGTCTACTCCAGTTTATGGCTCAGTCCAGATTTCTACCTCACAGAACA  1000
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACAGTCTACTCCAGTTTATGGCTCA-TCCAGATTTCTACCTCACAGAACA  993

seq1  CTGCATAGTTCTGACTCAACATTTTCTCTCTATAGACACCTAGCCAATGA  1050
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  CTGCATAG-TCTGA-TCAACATTTTCTCTCTATAGACACCTAGCCAATGA  1041