BAC Information

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BAC

Clone NameB6Ng01-023A07
Chromosome2 (Build37)
Map Location 32,696,623 - 32,874,866
singlet/doubletdoublet
Overlap geneStxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3
Upstream geneFibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik
Downstream geneRalgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik, LOC100041931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023A07.bB6Ng01-023A07.g
ACCDH855059DH855060
length3651,104
definitionDH855059|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A07, 5' end.DH855060|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,696,623 - 32,697,285)(32,873,758 - 32,874,866)
sequence
caggacagccagggcacacagacaaactctgtctgggggaaaaaaacaaa
acaaacattcaaaggaagggaaggagatgaggtagaaggcatacttgagc
ctaagaattgagtttagcctggaaccaatacaaagatcctgtcagaggaa
ggaaggagggaagggaggggcagaggaggggttagagagcctgggcgagg
aagtgtagaaccggagccctcatacatccagagggaaggtgaggcggtgc
agctgctctgtgggctccgcagtaagtaaaggagccacggaggtgtctca
gtgggaaaggtgcttgccactaagactggtgatcctatttttagttccat
tttttttttttgttg
gaattctagaacagccaggactacacagagaaaccctgtctcgagggaaa
taaaagattagatctgttctctgctctggaagcttactgtgccacaagaa
cagggaggtaaacatgcctacagtcatataaatccgtacttcagaattta
aactggaagcactctcccatgaaaggaggttagatcaatgacatgctggc
aattcctttagtcagttttcatcactgtggcaaagtacctgagaatacga
gcttttggagccttcagtcatcacatgggtctgtcactaagagcttaagg
taaggcagagtatggtggccacaggcatgatggagggagacttctcacct
catggtagccaggaaacagggagagcaagagacatgtaggggggggcggg
aatctgtccttcaaaggcactactctgtggcctgcttcctcaactagacc
ccacttccatgtgtctccactgctcaccagtaatcaaagtattatcccac
caggagcctggccactgatgagactagagccttcatggcctacgataact
ctgagtgattggatcgaccagctgggtccatgcccttgacgtgttgggag
acactccatatcccaaccataatgctagtatcataatggctggtggcata
cactgtgcagactctgctggcaaagagcactcttcaatagctattaatga
cggtaatgtgcctcttttcacttgttttagtaattaacggtgaaaaagcc
actttggaaaccccaacttttgcccagaaacgccggcgtactctggacat
gttgatccgctccttataccaggatttgatgccggatttgcataaggtac
ctgggtttctttcctgtgggggttctggagagcacagtctcggccatgag
ccatgagcccatggtacttgctgcctagactgccctgaagcgaccacagc
tggcattcctaataaagggaggtcgttgagtgtctgtgagaagagaacaa
cgtggtccctacaaagcagtagcttttgaaattgggatagagatgggcag
agggtagtcagcatctggagccaaccttccgtgctctggtgcgatcttgg
tgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32696623_32697285
seq2: B6Ng01-023A07.b_43_406

seq1  CAGGACAGCCAGGGCACACAGAGAAACCCTGTCTGGGGGAAAAAAACAAA  50
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  CAGGACAGCCAGGGCACACAGACAAACTCTGTCTGGGGGAAAAAAACAAA  50

seq1  ACAAACATTCAAAGGAAGGGAAGGAGATGAGGTAGAAGGCATACTTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATTCAAAGGAAGGGAAGGAGATGAGGTAGAAGGCATACTTGAGC  100

seq1  CTAAGAATTGAGTTTAGCCTGGAACCAATACAAAGATCCTGTCAGAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAATTGAGTTTAGCCTGGAACCAATACAAAGATCCTGTCAGAGGAA  150

seq1  GGAAGGAGGGAAGGGAGGGGCAGAGGAGGGGTTAGAGAGCCTGGGCGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGGGAAGGGAGGGGCAGAGGAGGGGTTAGAGAGCCTGGGCGAGG  200

seq1  AAGTGTAGAACCGGAGCCCTCAGACATCCAGAGGGAAGGTGAGGCGGTGC  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGTGTAGAACCGGAGCCCTCATACATCCAGAGGGAAGGTGAGGCGGTGC  250

seq1  AGCTGCTCTGTGGGCTCCGCAGCAAGTAAAGGAGCCACGGAGGTGGCTCA  300
      |||||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  AGCTGCTCTGTGGGCTCCGCAGTAAGTAAAGGAGCCACGGAGGTGTCTCA  300

seq1  GTGGGAAAGGTGCTTGCCACTAGGACTGGTGATCCTAAGTTCAGTTCCA-  349
      |||||||||||||||||||||| ||||||||||||||  || ||||||| 
seq2  GTGGGAAAGGTGCTTGCCACTAAGACTGGTGATCCTATTTTTAGTTCCAT  350

seq1  -GGCCCCACATGGTAGAAGGTGAGAACCAATGCAGAACTTCTACATGTGT  398
                || |                                    
seq2  TTTTTTTTTTTGTT------------------------------------  364

seq1  GCAATGGTATGTGTGTGCACATACACACACGTGCTTGCACACACACACAC  448
                                                        
seq2  --------------------------------------------------  364

seq1  ACACACACACACACACACACACACAAAGTAAAATGCTATGTAAAAGAGGA  498
                                                        
seq2  --------------------------------------------------  364

seq1  TAGGGGAGTTGAGATAGGGTCTCACTACATGGTCTTGAGCAGCCTCGAAC  548
                                                        
seq2  --------------------------------------------------  364

seq1  TTTTCATGCAGATTATGGTAGTCTAGAGCTTGCTGCAATCCTCCTGCCTC  598
                                                        
seq2  --------------------------------------------------  364

seq1  TGGTGCTCAGATAGCCAGCATCTACTGCAACTGCTCTGGATGAAAGAAAT  648
                                                        
seq2  --------------------------------------------------  364

seq1  CAAGTTTTTTTTGTT  663
                     
seq2  ---------------  364

seq1: chr2_32873758_32874866
seq2: B6Ng01-023A07.g_67_1170 (reverse)

seq1  AGCACCAAGGACAGCACCAGGAGCACGCAGCTTTGGCTTCCAGGATGCTG  50
      |||||||| ||  |||||| ||||||| |   ||||| |||| |||||||
seq2  AGCACCAA-GATCGCACCA-GAGCACGGAAGGTTGGC-TCCA-GATGCTG  46

seq1  ACCTACACTCTGCCCATCTCTATCCCAATTTCAAAGGCTACTGCTTTGTA  100
      | |||| |||||||||||||||||||||||||||| ||||||||||||||
seq2  A-CTACCCTCTGCCCATCTCTATCCCAATTTCAAAAGCTACTGCTTTGTA  95

seq1  GGGACCACGTTGTTCTC-TCTCACAGACACTCAACGACCTCCCTTTATGG  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||  
seq2  GGGACCACGTTGTTCTCTTCTCACAGACACTCAACGACCTCCCTTTATTA  145

seq1  GGAATGCCAGCTGTGGTCGCTTCAGGGCAGTCTAGGCAGCAAGTACCATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCCAGCTGTGGTCGCTTCAGGGCAGTCTAGGCAGCAAGTACCATG  195

seq1  GGCTCATGGCTCATGGCCGAGACTGTGCTCTCCAGAACCCCCACAGGAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGGCTCATGGCCGAGACTGTGCTCTCCAGAACCCCCACAGGAAA  245

seq1  GGAAACCCAGGTACCTTATGCAAATCCGGCATCAAATCCTGGTATAAGGA  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GAAACCCAGGTACCTTATGCAAATCCGGCATCAAATCCTGGTATAAGGA  294

seq1  GCGGATCAACATGTCCAGAGTACGCCGGCGTTTCTGGGCAAAAGTTGGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATCAACATGTCCAGAGTACGCCGGCGTTTCTGGGCAAAAGTTGGGG  344

seq1  TTTCCAAAGTGGCTTTTTCACCGTTAATTACTAAAACAAGTGAAAAGAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAGTGGCTTTTTCACCGTTAATTACTAAAACAAGTGAAAAGAGG  394

seq1  CACATTACCGTCATTAATAGCTATTGAAGAGTGCTCTTTGCCAGCAGAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTACCGTCATTAATAGCTATTGAAGAGTGCTCTTTGCCAGCAGAGT  444

seq1  CTGCACAGTGTATGCCACCAGCCATTATGATACTAGCATTATGGTTGGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACAGTGTATGCCACCAGCCATTATGATACTAGCATTATGGTTGGGA  494

seq1  TATGGAGTGTCTCCCAACACGTCAAGGGCATGGACCCAGCTGGTCGATCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGTGTCTCCCAACACGTCAAGGGCATGGACCCAGCTGGTCGATCC  544

seq1  AATCACTCAGAGTTATCGTAGGCCATGAAGGCTCTAGTCTCATCAGTGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTCAGAGTTATCGTAGGCCATGAAGGCTCTAGTCTCATCAGTGGC  594

seq1  CAGGCTCCTGGTGGGATAATACTTTGATTACTGGTGAGCAGTGGAGACAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCCTGGTGGGATAATACTTTGATTACTGGTGAGCAGTGGAGACAC  644

seq1  ATGGAAGTGGGGTCTAGTTGAGGAAGCAGGCCACAGAGTAGTGCCTTTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGTGGGGTCTAGTTGAGGAAGCAGGCCACAGAGTAGTGCCTTTGA  694

seq1  AGGACAGATTCCCGCCCCCCCCTACATGTCTCTTGCTCTCCCTGTTTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGATTCCCGCCCCCCCCTACATGTCTCTTGCTCTCCCTGTTTCCT  744

seq1  GGCTACCATGAGGTGAGAAGTCTCCCTCCATCATGCCTGTGGCCACCATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACCATGAGGTGAGAAGTCTCCCTCCATCATGCCTGTGGCCACCATA  794

seq1  CTCTGCCTTACCTTAAGCTCTTAGTGACAGACCCATGTGATGACTGAAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTTACCTTAAGCTCTTAGTGACAGACCCATGTGATGACTGAAGG  844

seq1  CTCCAAAAGCTCGTATTCTCAGGTACTTTGCCACAGTGATGAAAACTGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAAGCTCGTATTCTCAGGTACTTTGCCACAGTGATGAAAACTGAC  894

seq1  TAAAGGAATTGCCAGCATGTCATTGATCTAACCTCCTTTCATGGGAGAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAATTGCCAGCATGTCATTGATCTAACCTCCTTTCATGGGAGAGT  944

seq1  GCTTCCAGTTTAAATTCTGAAGTACGGATTTATATGACTGTAGGCATGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAGTTTAAATTCTGAAGTACGGATTTATATGACTGTAGGCATGTT  994

seq1  TACCTCCCTGTTCTTGTGGCACAGTAAGCTTCCAGAGCAGAGAACAGATC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCTGTTCTTGTGGCACAGTAAGCTTCCAGAGCAGAGAACAGATC  1044

seq1  TAATCTTTTATTTCCCTCGAGACAGGGTTTCTCTGTGTAGTCCTGGCTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTTATTTCCCTCGAGACAGGGTTTCTCTGTGTAGTCCTGGCTGT  1094

seq1  TCTAGAATTC  1109
      ||||||||||
seq2  TCTAGAATTC  1104