BAC Information

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BAC

Clone NameB6Ng01-023C19
Chromosome2 (Build37)
Map Location 142,041,057 - 142,228,683
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor, LOC668915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023C19.bB6Ng01-023C19.g
ACCDH855167DH855168
length1761,113
definitionDH855167|Mus musculus domesticus DNA, BAC clone: B6Ng01-023C19, 5' end.DH855168|Mus musculus domesticus DNA, BAC clone: B6Ng01-023C19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,228,540 - 142,228,683)(142,041,057 - 142,042,176)
sequence
ctttctactcactatattggagaggtccgcggattcaacagtatctaagg
ggctggtgaaaattacacctactaggttcctaaacctaggataataataa
tgatggaagatggcctgaagaatggtgagatattctctctctctctctct
ctcctcactctctctctctctctctc
gaattctggaatgagcgaacagctgctgagagaataagaattaggcatag
acctattagatcttagacttaaagaaaggaccagtgaagcaaaaataaaa
tagactctaaaatgaaatcctcactgtactgctcagcaccaaggatacag
gggggattcgaaaagagaagtgccctttgctcacagaatttagagttggt
tgaatgtgtatataaatgtacaaaaaagacataaacaaaggagcaagata
attccagatccaagtggtgggtttttgaaaagcttcactgataggtgttt
tacagtatggaattagggaaagcttttctagggcagggttggtgggactg
aatttaccctggaaaacaaagtaaaacaacaacaacaacaacaaaaagac
ccaaagtaggcagaaatgtaatggagatactggagtagagacagcagaaa
aaatcctgagggcaggaatcagcctaactgtggttcaaacataaaattaa
attaaagaggggctgaagagatagttcagcagttatgaacactggctgtt
cttccagaggccccaggttcaattctcagcacccatatagcagagctcac
aactatctgtaactctagttctagggaagcctacaccttctgtagcttct
atggacactgcacacatgtggtacacagacatacatgcatttaaaacatc
catgaatataaaatagaaatgaggaaaatacaaaaggcaaatgaaagatg
aaactatagatgccaacagggccacatgacacattgtgttctggagcaga
agtagatgaggatgtcaccctaagtagtgatttcaaacaggtgagcaccc
cacatctgctctatgttttcaaagctcactatgtggagaagcagaagcac
agttcttagaagaggagagcagaaggctagagacacagaaggccaggagg
ttctgctgactcgagtgccagcacattctaatagatgggtctaggatatg
ttagagcagagatgcagcagtgagcctaagtttggatggtgatacttagg
ttaagtttaactgggtggtgaatagatgcaatgcctctcagacatgaagt
acccacaggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142228540_142228683
seq2: B6Ng01-023C19.b_33_176 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGAGAATATCTC  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGTGAGGAGAGAGAGAGAGAGAGAGAATATCTC  50

seq1  ACCATTCTTCAGGCCATCTTCCATCATTATTATTATCCTAGGTTTAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCTTCAGGCCATCTTCCATCATTATTATTATCCTAGGTTTAGGAA  100

seq1  CCTAGTAGGTGTACTTTTCACCAGCCCCTTAGATACTGTTGAAT  144
      ||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTAGTAGGTGTAATTTTCACCAGCCCCTTAGATACTGTTGAAT  144

seq1: chr2_142041057_142042176
seq2: B6Ng01-023C19.g_69_1181

seq1  GAATTCTGGAATGAGCGAACAGCTGCTGAGAGAATAAGAATTAGGCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAATGAGCGAACAGCTGCTGAGAGAATAAGAATTAGGCATAG  50

seq1  ACCTATTAGATCTTAGACTTAAAGAAAGGACCAGTGAAGCAAAAATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATTAGATCTTAGACTTAAAGAAAGGACCAGTGAAGCAAAAATAAAA  100

seq1  TAGACTCTAAAATGAAATCCTCACTGTACTGCTCAGCACCAAGGATACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCTAAAATGAAATCCTCACTGTACTGCTCAGCACCAAGGATACAG  150

seq1  GGGGGATTCGAAAAGAGAAGTGCCCTTTGCTCACAGAATTTAGAGTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGATTCGAAAAGAGAAGTGCCCTTTGCTCACAGAATTTAGAGTTGGT  200

seq1  TGAATGTGTATATAAATGTACAAAAAAGACATAAACAAAGGAGCAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTGTATATAAATGTACAAAAAAGACATAAACAAAGGAGCAAGATA  250

seq1  ATTCCAGATCCAAGTGGTGGGTTTTTGAAAAGCTTCACTGATAGGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGATCCAAGTGGTGGGTTTTTGAAAAGCTTCACTGATAGGTGTTT  300

seq1  TACAGTATGGAATTAGGGAAAGCTTTTCTAGGGCAGGGTTGGTGGGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTATGGAATTAGGGAAAGCTTTTCTAGGGCAGGGTTGGTGGGACTG  350

seq1  AATTTACCCTGGAAAACAAAGTAAAACAACAACAACAACAACAAAAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACCCTGGAAAACAAAGTAAAACAACAACAACAACAACAAAAAGAC  400

seq1  CCAAAGTAGGCAGAAATGTAATGGAGATACTGGAGTAGAGACAGCAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTAGGCAGAAATGTAATGGAGATACTGGAGTAGAGACAGCAGAAA  450

seq1  AAATCCTGAGGGCAGGAATCAGCCTAACTGTGGTTCAAACATAAAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGAGGGCAGGAATCAGCCTAACTGTGGTTCAAACATAAAATTAA  500

seq1  ATTAAAGAGGGGCTGAAGAGATAGTTCAGCAGTTATGAACACTGGCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAGGGGCTGAAGAGATAGTTCAGCAGTTATGAACACTGGCTGTT  550

seq1  CTTCCAGAGGCCCCAGGTTCAATTCTCAGCACCCATATAGCAGAGCTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGGCCCCAGGTTCAATTCTCAGCACCCATATAGCAGAGCTCAC  600

seq1  AACTATCTGTAACTCTAGTTCTAGGGAAGCCTACACCTTCTGTAGCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCTGTAACTCTAGTTCTAGGGAAGCCTACACCTTCTGTAGCTTCT  650

seq1  ATGGACACTGCACACATGTGGTACACAGACATACATGCATTTAAAACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACACTGCACACATGTGGTACACAGACATACATGCATTTAAAACATC  700

seq1  CATGAATATAAAATAGAAATGAGGAAAATACAAAAGGCAAATGAAAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATATAAAATAGAAATGAGGAAAATACAAAAGGCAAATGAAAGATG  750

seq1  AAACTATAGATGCCAACAGGGCCACATGACACATTGTGTTCTGGAGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAGATGCCAACAGGGCCACATGACACATTGTGTTCTGGAGCAGA  800

seq1  AGTAGATGAGGATGTCACCCTAAGTAGTGATTTCAAACAGGTGAGCACCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATGAGGATGTCACCCTAAGTAGTGATTTCAAACAGGTGAGCACCC  850

seq1  CACATCTGCTCTATGTTTTCAAAGCTCACTATGTGGAGAAGCAGAAGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGCTCTATGTTTTCAAAGCTCACTATGTGGAGAAGCAGAAGCAC  900

seq1  AGTTCTTAGAAGAGGAGAGCAGAAGGCTAGAGACACAGAAGGCCAGGAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAGAAGAGGAGAGCAGAAGGCTAGAGACACAGAAGGCCAGGAGG  950

seq1  TTCTGCTGACTCGAGTGCCAGCACAATTCCTAATAGATGGGTCTAGGATA  1000
      |||||||||||||||||||||||||  | |||||||||||||||||||||
seq2  TTCTGCTGACTCGAGTGCCAGCACA--TTCTAATAGATGGGTCTAGGATA  998

seq1  TGTTAGAGCAGAGATGGCAGCAGGTGAGCCTAGGTTTGGATGGTGATACC  1050
      ||||||||||||||| |||||| ||||||||| |||||||||||||||| 
seq2  TGTTAGAGCAGAGAT-GCAGCA-GTGAGCCTAAGTTTGGATGGTGATACT  1046

seq1  TAGGTTTTAGTTTAAACTGGTTGGTAGATAGTATGCAATGCCATCCAGAC  1100
      |||| || ||||| |||||| ||||  |||| ||||||||||   |||||
seq2  TAGG-TTAAGTTT-AACTGGGTGGTGAATAG-ATGCAATGCCTCTCAGAC  1093

seq1  ATGGAGTA-CCACAGAGAGAA  1120
      ||| |||| |||||| |||||
seq2  ATGAAGTACCCACAG-GAGAA  1113