BAC Information

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BAC

Clone NameB6Ng01-024I13
Chromosome2 (Build37)2 (Build37)
Map Location 142,775,260 - 142,775,79199,273,281 - 99,273,853
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024I13.bB6Ng01-024I13.g
ACCDH856138DH856139
length606938
definitionDH856138|Mus musculus domesticus DNA, BAC clone: B6Ng01-024I13, 5' end.DH856139|Mus musculus domesticus DNA, BAC clone: B6Ng01-024I13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,775,260 - 142,775,791)(99,273,281 - 99,273,853)
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacatcgatagattttcgtatattaaacc
atccctgcatccctggaataaaacctagttggtcaggatggatgattgct
ttaatgtgttcttggattcggttatcgagaattttattgaggatttttgc
atctatattcataagagaaattggtctgaagttctctatctttgttggat
ctctctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttatgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagatctctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgtttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttg
gaattcagattaccagcaatcacaggatagtcagggacatttacaacact
agaagctacaggatgcagaatgacagagatctacatgctccatccagtct
agctaagtagtaagttctaactctagagaaaccttatttcagaaactaag
atagagggcaatggtggaggacaaatacaacccatggcctgcaagtatat
gtgtgcataagtgcatttatcatacataccacatatatacatacatacac
ataccctcatatacactacatatgtgcacaaacaggtacatacatttaca
acacacaaaagcatacactttaaaaatttggaaggtgggcatggtttcaa
aatagaaggagaaagagggatgaaagacaaattacaataaagatttttta
aaaaattcatggaatcatattacctatttacataaaattacacataaaat
ataattgggtgtacatacacacacatacacacacatatacatatacacat
acacacatacatgtccatatacatacatatatatgtatataaaatgaagt
ccttccatttgcattttcagtgttcctcaccaaagagaccgatgataaaa
acaaaacctcagtacaaggcttagagtcttcctttcaaatagttgatgag
ggaaatacaagtgatccctcaataatgtagactatcttgtatcccatcat
tgccttccagagtataaaggtaagtttctaatgttgaagacattatattt
gagacacaggactttagaagattcgagctgttatttacctgaaaactttt
accctgaggacaaagttacaataagatgctatgtcatctgtaaagggagg
aaagaaaccacttgtcctactcagttgtaatggctatgaaccacaaaatg
gcatcatgttccttaagtgtgcaccgtgacacctcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142775260_142775791
seq2: B6Ng01-024I13.b_107_638 (reverse)

seq1  CAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAG  50

seq1  GTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATC  100

seq1  CCCTAGAGAAATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAAAGCC  150
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  CCCTAAAGAAATAGAAACAGTTATAAATAGTCTCCCAGCCAAAAAAAGCC  150

seq1  CAGGACCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGAT  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGGACCAGACGGGTTTAGTGCAGAGATCTATCAGACCTTCAAAGAAGAT  200

seq1  CTAATTCCAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTAC  250
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTAATTCCAGTTCTGCACAAACTTTTTCATAAGATAGAAGTAGAAGGTAC  250

seq1  TCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCAC  300

seq1  AGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAAT  350
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAAT  350

seq1  ATCGATGTAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGAACA  400
      || |||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  ATAGATGCAAAAATCCTCAATAAAATTCTCGATAACCGAATCCAAGAACA  400

seq1  CATTAAAGCAATCATCCATACTGACCAAGTAGGTTTTATTCCAGGGATGC  450
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  CATTAAAGCAATCATCCATCCTGACCAACTAGGTTTTATTCCAGGGATGC  450

seq1  AGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAAC  500
      ||||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  AGGGATGGTTTAATATACGAAAATCTATCGATGTAATCCATTATATAAAC  500

seq1  AAACTCAAAGACAAAAACCACATGATCATCTC  532
      ||||||||||||||||||||||||||||||||
seq2  AAACTCAAAGACAAAAACCACATGATCATCTC  532

seq1: chr2_99273281_99273853
seq2: B6Ng01-024I13.g_68_640 (reverse)

seq1  ACACTGAAAATGCAAATGGAAGGACTTCATTTTATATACATATATATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAAAATGCAAATGGAAGGACTTCATTTTATATACATATATATGTA  50

seq1  TGTATATGGACATGTATGTGTGTATGTGTATATGTATATGTGTGTGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGGACATGTATGTGTGTATGTGTATATGTATATGTGTGTGTATG  100

seq1  TGTGTGTATGTACACCCAATTATATTTTATGTGTAATTTTATGTAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATGTACACCCAATTATATTTTATGTGTAATTTTATGTAAATAG  150

seq1  GTAATATGATTCCATGAATTTTTTAAAAAATCTTTATTGTAATTTGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATGATTCCATGAATTTTTTAAAAAATCTTTATTGTAATTTGTCTT  200

seq1  TCATCCCTCTTTCTCCTTCTATTTTGAAACCATGCCCACCTTCCAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTCTTTCTCCTTCTATTTTGAAACCATGCCCACCTTCCAAATTT  250

seq1  TTAAAGTGTATGCTTTTGTGTGTTGTAAATGTATGTACCTGTTTGTGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTGTATGCTTTTGTGTGTTGTAAATGTATGTACCTGTTTGTGCAC  300

seq1  ATATGTAGTGTATATGAGGGTATGTGTATGTATGTATATATGTGGTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGTGTATATGAGGGTATGTGTATGTATGTATATATGTGGTATGT  350

seq1  ATGATAAATGCACTTATGCACACATATACTTGCAGGCCATGGGTTGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAATGCACTTATGCACACATATACTTGCAGGCCATGGGTTGTATT  400

seq1  TGTCCTCCACCATTGCCCTCTATCTTAGTTTCTGAAATAAGGTTTCTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCCACCATTGCCCTCTATCTTAGTTTCTGAAATAAGGTTTCTCTA  450

seq1  GAGTTAGAACTTACTACTTAGCTAGACTGGATGGAGCATGTAGATCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAGAACTTACTACTTAGCTAGACTGGATGGAGCATGTAGATCTCTG  500

seq1  TCATTCTGCATCCTGTAGCTTCTAGTGTTGTAAATGTCCCTGACTATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGCATCCTGTAGCTTCTAGTGTTGTAAATGTCCCTGACTATCCT  550

seq1  GTGATTGCTGGTAATCTGAATTC  573
      |||||||||||||||||||||||
seq2  GTGATTGCTGGTAATCTGAATTC  573