BAC Information

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BAC

Clone NameB6Ng01-025M23
Chromosome2 (Build37)
Map Location 100,097,541 - 100,098,394
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386, LOC668702
Downstream geneLOC100042907, LOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025M23.bB6Ng01-025M23.g
ACCDH857037DH857038
length837620
definitionDH857037|Mus musculus domesticus DNA, BAC clone: B6Ng01-025M23, 5' end.DH857038|Mus musculus domesticus DNA, BAC clone: B6Ng01-025M23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctaaactctcttctgggtcacaaaggatctagttcaaaact
ctgatattatagaacatggttaaagaaggttaagattcctaaggtatttt
aaagagtaaaactacatatccctcccttaaattccatcaaactactattg
ctaattttctgttgtgttgaaattactttcctcaatgaactgacccacat
gtctatctatcattgaaagtaatttgacaaatatatacctggtaaagacc
aacattaccctattttcttttataatattatttgaaagaagttaaatgtt
aagagaactcttgtatcctactgtcaaataaaatcaattcaagcctttcc
agaagccctgcttttcccctggagagagaaaccctgagttttgttttgtt
ttgttttgtttcctgatatactttctttccataagatctactaagtttac
acaaatagtgttttgaaaactccaacctccaaaggtccttctgttaattt
accagtgaacatttatgcataatctcagtgaccagtgatctccaatttta
ttggttcttgagttctgaatattttagggtatcttggcactcttttttct
gtctttcatgcttcaacctttgttttcagaaccccacttaaggccttttt
tcttttttcttgattacaaatgtttgattattccttcccatcccatattt
tacccaggaaataatataacttttagcaaaataatatgtggcttgaaaat
attaggggttatatttcttcatcataatcacaggctgtaatcaaagagag
gaagaaaagaatgagaagaaaaagagagagaagaagg

gaattccatatattaaactatccctggatccctgggatgaagcctacttg
gtcatgatggatgatcgttttgatgtgttcttggaatcgatttgcgagga
tattattgagaatttttgcattgatattcataagggaattgttctgaagt
tctctttctttgttggatctttgtgtggtttagatatcagagtaattgta
gcttcattgaatgaattgggtagattcattcatagaatgaatctgtttct
atttggtggaatagtttgagaagagttggaattaggtcttctttgaaggt
ctgatagaactctgcactaaacccatctggtcctgggttttttttgtttt
ttgttttttggtttttggtttttttttttttttttttggttgggggactg
ttgatgactgcttctaattctttagaggaaatgggaaactttagattgtt
aacctgatcctgattttaactttggtacctggtatctgtctaggaagttt
gtccatttcttctagattttctagtttttgttaagtatagtcttttgtag
taggatctgataatgtttttagatttcctcagttttctgttgttatgtct
ttttcgttttagattttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100097541_100098394
seq2: B6Ng01-025M23.b_47_883 (reverse)

seq1  CCTTCTCCTCTTTTTCCTCTTCCTCCTCCTCCCTCTCTTTCTCCTTCTCC  50
                                 ||| | ||||| |||  |||| |
seq2  ---------------------------CCTTCTTCTCTCTCTTTTTCTTC  23

seq1  TCATTTCTCTCTTCTTCTCCCTCTTCTTTGATTTACAGGCTGTTGATTAT  100
      ||||     |||| |||| |||| ||||||| |||||| ||| |||||||
seq2  TCAT-----TCTT-TTCTTCCTC-TCTTTGA-TTACAGCCTG-TGATTAT  64

seq1  GATGAAGAAATATAACCCCT-ATATTTTCAAGCCACATATTATTTTGCTA  149
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATGAAGAAATATAACCCCTAATATTTTCAAGCCACATATTATTTTGCTA  114

seq1  AA--GTATATTATGTCCTGGGT-AAATATGGGGATGGGA--GGATAATCA  194
      ||   |||||||| |||||||| |||||| |||||||||  | |||||||
seq2  AAAGTTATATTATTTCCTGGGTAAAATAT-GGGATGGGAAGGAATAATCA  163

seq1  AACA-TTGTAATCAAGAAAAA--GAAAAAGGCCTT-AGTGGGG-TCTGAA  239
      |||| ||||||||||||||||   ||||||||||| ||||||| ||||||
seq2  AACATTTGTAATCAAGAAAAAAGAAAAAAGGCCTTAAGTGGGGTTCTGAA  213

seq1  A--CAAGGTTGAAGCATG-AAGACAG-AAAAAGAGTGACAAGATACCCTA  285
      |   |||||||||||||| ||||||| |||||||||| ||||||||||||
seq2  AACAAAGGTTGAAGCATGAAAGACAGAAAAAAGAGTGCCAAGATACCCTA  263

seq1  AAATATTCAGAACTCAAGAA-CAATAAA--TTGAGATCACTGGTCACTGA  332
      |||||||||||||||||||| |||||||  | ||||||||||||||||||
seq2  AAATATTCAGAACTCAAGAACCAATAAAATTGGAGATCACTGGTCACTGA  313

seq1  GATTATGCAT-AATGTTCACTGGTAAA-TAACAGAAGGACCTTTGGAGGT  380
      |||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  GATTATGCATAAATGTTCACTGGTAAATTAACAGAAGGACCTTTGGAGGT  363

seq1  TGGAGTTTTCAAAACACTATTTGTGTAAACTTAGTAGATCTTATGGAAAG  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTTTCAAAACACTATTTGTGTAAACTTAGTAGATCTTATGGAAAG  413

seq1  AAAGTATATCAGGAAACAAAACAAAACAAAACAAAACTCAGGGTTTCTCT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATATCAGGAAACAAAACAAAACAAAACAAAACTCAGGGTTTCTCT  463

seq1  CTCCAGGGGAAAAGCAGGGCTTCTGGAAAGGCTTGAATTGATTTTATTTG  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGGAAAAGCAGGGCTTCTGGAAAGGCTTGAATTGATTTTATTTG  513

seq1  ACAGTAGGATACAAGAGTTCTCTTAACATTTAACTTCTTTCAAATAATAT  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGATACAAGAGTTCTCTTAACATTTAACTTCTTTCAAATAATAT  563

seq1  TATAAAAGAAAATAGGGTAATGTTGGTCTTTACCAGGTATATATTTGTCA  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGAAAATAGGGTAATGTTGGTCTTTACCAGGTATATATTTGTCA  613

seq1  AATTACTTTCAATGATAGATAGACATGTGGGTCAGTTCATTGAGGAAAGT  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTTCAATGATAGATAGACATGTGGGTCAGTTCATTGAGGAAAGT  663

seq1  AATTTCAACACAACAGAAAATTAGCAATAGTAGTTTGATGGAATTTAAGG  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAACACAACAGAAAATTAGCAATAGTAGTTTGATGGAATTTAAGG  713

seq1  GAGGGATATGTAGTTTTACTCTTTAAAATACCTTAGGAATCTTAACCTTC  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATATGTAGTTTTACTCTTTAAAATACCTTAGGAATCTTAACCTTC  763

seq1  TTTAACCATGTTCTATAATATCAGAGTTTTGAACTAGATCCTTTGTGACC  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCATGTTCTATAATATCAGAGTTTTGAACTAGATCCTTTGTGACC  813

seq1  CAGAAGAGAGTTTAGAGTGAATTC  854
      ||||||||||||||||||||||||
seq2  CAGAAGAGAGTTTAGAGTGAATTC  837


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