BAC Information

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BAC

Clone NameB6Ng01-026M12
Chromosome2 (Build37)
Map Location 42,863,286 - 42,864,295
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026M12.bB6Ng01-026M12.g
ACCDH857714DH857715
length9951,041
definitionDH857714|Mus musculus domesticus DNA, BAC clone: B6Ng01-026M12, 5' end.DH857715|Mus musculus domesticus DNA, BAC clone: B6Ng01-026M12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgtttgactgagagacactgccaccccaaaatttcaatgaag
tattaagataattttgacatcagtttgggctttcatatacacatgtaaaa
atgtgtatatacaaccatatattcttacatacatataaaagcatatatat
atatgtaaaaataatatatatgagagagaagtaaaaataggtatattatt
tagcataagtaatgctctagatctctagatcaatggagtagaagttccag
aagacagtgtatacagttacagccatctctttttttttgacaacactgcc
aaaaatgcattgcataacagacagcattgtcaaatcaggaaaactagata
tcttcacattgcagattgaaattagatatgtgcctctcaccatgctcaaa
agaaaaacccaaatcaatcaaggagctcagtgtaagatctgaaactctga
aattgctagagaaaaaaatagagtgcataccacaagatagaaacacaggt
aagtattttctgaatcggtccccagtttctcaggacagatggctaacatc
tacaaatgggacattgtaaaattaaaagacttctgcacaggaaaagatct
gggcaatcaaacaaagaggcattctgcagaatgagagagaaaccatgaaa
aaataaacaaataatccaatgagcaagctatgtaattgacaatatcctta
cttaactattttacttttatttatacttttattgaaatattcacaccatg
tgtttgatcagactgttcctctatcctagctgctctcagattctccctag
cactccatgcacatccccaagccttttgttactctctttaaaaaacaaac
aggggaacaaaacgaatgcaaaataagaaactcaaaatgtaaatgcactc
aacacactcactaaacactacagagcttctacaaaacactaaaccagaaa
ccttatacacagcaaagagtagcatgagtaaaagagatttaaaaa
gaattctctatttttatctgtaccatatttttaattggatgatttggggt
tttttgatcatctagtttttagagctctttagatattttggatactagtc
caatatcagatatatagttggtaaaatcttttcttgttttttagattact
attttgtcttgactgtgttgttctttcccaagaagaggcatctcagtttc
atgagatcctgtttattaatatttcattttaatatatgtgctaatagtgt
tctcctcagaaagtcttctcatgtgccaataagttcaaagattttgcaca
ctttctcttctataacattcagtatatctacttttatgttgaagtctttg
atgcatttggagttatttttgtgcaaggtaaaaattatgaatttatttgc
atttttctacttgcagacattcagtttgagtagcaccatttgtagaaaac
actgtctatttctggcttctttatccaaaatcaatttccatagtggtgtg
gatatattttcaggtgtttaaatctatcccattgatcaatattatgacaa
tactagactgtttttattactattagaacaagagccaataagttaaggtc
acaataataaagaatagagctaatatttactttattattaatggtatctt
tagaacaacctctgggagcaatcaatacttatccgtttcttccagtttac
taattattgtgaaaatggtgttctttctcttaatcttaccaattttggac
atcatatttctcactactcctctttgtcatcttattctatattatcctct
ttcccatttagtacttaacaggaaatgctgatagaaaaacaataatggcc
ttacttcaacttttagtcaatatttctttcttaatgctttgaaattaata
tatattaaaatcattgtcccctttcctttctactctataatgccttgcat
gcacactgcttccatttcataattctgcctctttttaattcgtggttata
tatttctaaaattattaaaaactatcttcttatgccctaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42863286_42864295
seq2: B6Ng01-026M12.b_47_1041

seq1  GAATTCTGTGTTTGACTGAGAGACACTGCCACCCCAAAATTTCAATGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTTTGACTGAGAGACACTGCCACCCCAAAATTTCAATGAAG  50

seq1  TATTAAGATAATTTTGACATCAGTTTGGGCTTTCATATACACATGTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGATAATTTTGACATCAGTTTGGGCTTTCATATACACATGTAAAA  100

seq1  ATGTGTATATACAACCATATATTCTTACATACATATAAAAGCATATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATATACAACCATATATTCTTACATACATATAAAAGCATATATAT  150

seq1  ATATGTAAAAATAATATATATGAGAGAGAAGTAAAAATAGGTATATTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAAAAATAATATATATGAGAGAGAAGTAAAAATAGGTATATTATT  200

seq1  TAGCATAAGTAATGCTCTAGATCTCTAGATCAATGGAGTAGAAGTTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAAGTAATGCTCTAGATCTCTAGATCAATGGAGTAGAAGTTCCAG  250

seq1  AAGACAGTGTATACAGTTACAGCCATCTCTTTTTTTTTGACAACACTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTGTATACAGTTACAGCCATCTCTTTTTTTTTGACAACACTGCC  300

seq1  AAAAATGCATTGCATAACAGACAGCATTGTCAAATCAGGAAAACTAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCATTGCATAACAGACAGCATTGTCAAATCAGGAAAACTAGATA  350

seq1  TCTTCACATTGCAGATTGAAATTAGATATGTGCCTCTCACCATGCTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACATTGCAGATTGAAATTAGATATGTGCCTCTCACCATGCTCAAA  400

seq1  AGAAAAACCCAAATCAATCAAGGAGCTCAGTGTAAGATCTGAAACTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACCCAAATCAATCAAGGAGCTCAGTGTAAGATCTGAAACTCTGA  450

seq1  AATTGCTAGAGAAAAAAATAGAGTGCATACCACAAGATAGAAACACAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTAGAGAAAAAAATAGAGTGCATACCACAAGATAGAAACACAGGT  500

seq1  AAGTATTTTCTGAATCGGTCCCCAGTTTCTCAGGACAGATGGCTAACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTTCTGAATCGGTCCCCAGTTTCTCAGGACAGATGGCTAACATC  550

seq1  TACAAATGGGACATTGTAAAATTAAAAGACTTCTGCACAGGAAAAGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGGGACATTGTAAAATTAAAAGACTTCTGCACAGGAAAAGATCT  600

seq1  GGGCAATCAAACAAAGAGGCATTCTGCAGAATGAGAGAGAAACCATGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATCAAACAAAGAGGCATTCTGCAGAATGAGAGAGAAACCATGAAA  650

seq1  AAATAAACAAATAATCCAATGAGCAAGCTATGTAATTGACAATATCCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACAAATAATCCAATGAGCAAGCTATGTAATTGACAATATCCTTA  700

seq1  CTTAACTATTTTACTTTTATTTATACTTTTATTGAAATATTCACACCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTATTTTACTTTTATTTATACTTTTATTGAAATATTCACACCATG  750

seq1  TGTTTGATCAGACTGTTCCTCTATCCTAGCTGCTCTCAGATTCTCCCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATCAGACTGTTCCTCTATCCTAGCTGCTCTCAGATTCTCCCTAG  800

seq1  CACTCCATGCACATCCCCAAGCCTTTTGTTACTCTCTTTAAAAAAACAAA  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CACTCCATGCACATCCCCAAGCCTTTTGTTACTCTCTTT-AAAAAACAAA  849

seq1  CAGGGGAACAAAAACGAATGCAAAAATAAGAAACTCAAAAATGTAAATGC  900
      ||||||||| ||||||||||| |||||||||||||| |||||||||||||
seq2  CAGGGGAAC-AAAACGAATGC-AAAATAAGAAACTC-AAAATGTAAATGC  896

seq1  ACTCAAACACACTCACTAAAACAACTACAGAGCTTCTACAAAAACACTAA  950
      |||| |||||||||||||||   |||||||||||||||| ||||||||||
seq2  ACTC-AACACACTCACTAAA--CACTACAGAGCTTCTAC-AAAACACTAA  942

seq1  ACCAGAAACCTTATTACACAAGCAAAAGAGGTAGCAATGAAGTAAAAGGA  1000
      ||||||||||||| ||||| ||| ||||| ||||| ||| ||||||| ||
seq2  ACCAGAAACCTTA-TACAC-AGC-AAAGA-GTAGC-ATG-AGTAAAA-GA  985

seq1  GATTTAAAAA  1010
      ||||||||||
seq2  GATTTAAAAA  995