BAC Information

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BAC

Clone NameB6Ng01-027O21
Chromosome2 (Build37)
Map Location 92,254,051 - 92,395,217
singlet/doubletdoublet
Overlap geneCry2, Slc35c1, LOC100042775
Upstream gene1110051M20Rik, Lrp4, LOC619941, Ckap5, F2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik, D030051N19Rik, Chrm4, Mdk, Dgkz, Creb3l1, Phf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1
Downstream geneLOC100043205, Chst1, Syt13, LOC100042784, Trp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027O21.bB6Ng01-027O21.g
ACCDH858542DH858543
length922278
definitionDH858542|Mus musculus domesticus DNA, BAC clone: B6Ng01-027O21, 5' end.DH858543|Mus musculus domesticus DNA, BAC clone: B6Ng01-027O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,394,294 - 92,395,217)(92,254,051 - 92,254,328)
sequence
gaattctgtccaaaggtcagagaaaagaacattccagaaagaagaaaata
gctaggcaaagttagtccctagggaaacaatgattttgggtgtattggga
ggctggaggcaagaaagtaggcaaatagtgaaggcaaagagataggctga
aagcactaaccatcttttaggtgtggcaaggaacttggatttcatcccaa
gcccagggagtcaccaggaaatgctttgaagaaaaaaacccaaacaaatt
ggatttgcatttttaaaggatggctctgctggttgtgtagggaaagcaca
aagctgttgagagatacatctaagctccctgtgatggtgtgaccttgtct
gaggatttgacagcagagctaatgaagaggagatgggtggagaatgtatt
cagaggcaacactagcaaggctggaaggtgaattcaatgtgggggtgtaa
agaaaggcaaaccaggagggacccaaatcaaggactgttcaggttcagac
actaggaacaaatggtggtccagttaccaagtggggaagagtgaagtgga
aacaacttaaagaggaggcagaaagaacgccccaagggcagtgttttaca
gcagagagcctgtgaaatgcctgtcatagacaggaaaatccagtgctcaa
cctagacctcacagagacctgaggttagagacaccaaactgaactgaatg
ggagaagatcctttaacacatgctctaaactcatgtgtctgagtaagaga
gggtggagatgcaaagtaaaagccctaggacccagcctgtcctgcagagg
tcactgagacatgacgaatgggatatatagtacgcagcaccagccctgcc
atctcctcagcttcttgacatcctgttctacacaacaacatctgaaggct
caggctgtcttatgttcattgt
tcgccacaggagttgtccaaataaggagagggggggtgtgctgttcctct
tcacctaaggggtgggcatggtacacagagatgagtgtctgcctggctct
tagcactgtgacgatgctcaggtctcctgcacagaacaacctggagtgtc
tcccaatcgccatggttccaaatccttgagatgtgcagcaggactagact
taaaagattctcagtgtacaacatgcagccctgccttgggcaccaagaat
ggcttcaggggtgggttggggtggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_92394294_92395217
seq2: B6Ng01-027O21.b_47_968 (reverse)

seq1  ACAATGACCCTGAGACAGCCCTGAGCCTTCAGTTGTTGTTGTGTAGAACA  50
      ||||||| | | |||||| ||||||||||||| |||||||||||||||||
seq2  ACAATGAACATAAGACAG-CCTGAGCCTTCAGATGTTGTTGTGTAGAACA  49

seq1  GGATGTTCATGAAGCTGAGGAGATGGCAGGGCTGGGTGCTGCGTACTATA  100
      ||||| ||| ||||||||||||||||||||||| ||||||||||||||||
seq2  GGATG-TCAAGAAGCTGAGGAGATGGCAGGGCT-GGTGCTGCGTACTATA  97

seq1  TATCCCATTCGTCATGTCTCGGTGACCTCTGCAGGACAGGCTGGGTCCTA  150
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATCCCATTCGTCATGTCTCAGTGACCTCTGCAGGACAGGCTGGGTCCTA  147

seq1  GGGCTTTTTACTTTGCATCTCCACCCTCTCTTACTCAGACACATGAGTTT  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGC-TTTTACTTTGCATCTCCACCCTCTCTTACTCAGACACATGAGTTT  196

seq1  AGAGCATGTGTT-AAGGATCTTCTCCCATTCAGTTCAGTTTGGTGTCTCT  249
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGTGTTAAAGGATCTTCTCCCATTCAGTTCAGTTTGGTGTCTCT  246

seq1  AACCTCAGGTCTCTGTGAGGTCTAGGTTGAGCACTGGA-TTTCCTGTCTA  298
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACCTCAGGTCTCTGTGAGGTCTAGGTTGAGCACTGGATTTTCCTGTCTA  296

seq1  TGACAGGCATTTCACAGGCTCTCTGCTGTAAAACACTGCCCTTGGGGCGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGCATTTCACAGGCTCTCTGCTGTAAAACACTGCCCTTGGGGCGT  346

seq1  TCTTTCTGCCTCCTCTTTAAGTTGTTTCCACTTCACTCTTCCCCACTTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGCCTCCTCTTTAAGTTGTTTCCACTTCACTCTTCCCCACTTGG  396

seq1  TAACTGGACCACCATTTGTTCCTAGTGTCTGAACCTGAACAGTCCTTGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGACCACCATTTGTTCCTAGTGTCTGAACCTGAACAGTCCTTGAT  446

seq1  TTGGGTCCCTCCTGGTTTGCCTTTCTTTACACCCCCACATTGAATTCACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCCCTCCTGGTTTGCCTTTCTTTACACCCCCACATTGAATTCACC  496

seq1  TTCCAGCCTTGCTAGTGTTGCCTCTGAATACATTCTCCACCCATCTCCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCCTTGCTAGTGTTGCCTCTGAATACATTCTCCACCCATCTCCTC  546

seq1  TTCATTAGCTCTGCTGTCAAATCCTCAGACAAGGTCACACCATCACAGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAGCTCTGCTGTCAAATCCTCAGACAAGGTCACACCATCACAGGG  596

seq1  AGCTTAGATGTATCTCTCAACAGCTTTGTGCTTTCCCTACACAACCAGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGATGTATCTCTCAACAGCTTTGTGCTTTCCCTACACAACCAGCA  646

seq1  GAGCCATCCTTTAAAAATGCAAATCCAATTTGTTTGGGTTTTTTTCTTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCCTTTAAAAATGCAAATCCAATTTGTTTGGGTTTTTTTCTTCA  696

seq1  AAGCATTTCCTGGTGACTCCCTGGGCTTGGGATGAAATCCAAGTTCCTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTCCTGGTGACTCCCTGGGCTTGGGATGAAATCCAAGTTCCTTG  746

seq1  CCACACCTAAAAGATGGTTAGTGCTTTCAGCCTATCTCTTTGCCTTCACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCTAAAAGATGGTTAGTGCTTTCAGCCTATCTCTTTGCCTTCACT  796

seq1  ATTTGCCTACTTTCTTGCCTCCAGCCTCCCAATACACCCAAAATCATTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTACTTTCTTGCCTCCAGCCTCCCAATACACCCAAAATCATTGT  846

seq1  TTCCCTAGGGACTAACTTTGCCTAGCTATTTTCTTCTTTCTGGAATGTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAGGGACTAACTTTGCCTAGCTATTTTCTTCTTTCTGGAATGTTC  896

seq1  TTTTCTCTGACCTTTGGACAGAATTC  924
      ||||||||||||||||||||||||||
seq2  TTTTCTCTGACCTTTGGACAGAATTC  922

seq1: chr2_92254051_92254328
seq2: B6Ng01-027O21.g_75_352

seq1  TCGCCACAGGAGTTGTCCAAATAAGGAGAGGGGGGGTGTGCTGTTCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCACAGGAGTTGTCCAAATAAGGAGAGGGGGGGTGTGCTGTTCCTCT  50

seq1  TCACCTAAGGGGTGGGCATGGTACACAGAGATGAGTGTCTGCCTGGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAAGGGGTGGGCATGGTACACAGAGATGAGTGTCTGCCTGGCTCT  100

seq1  TAGCACTGTGACGATGCTCAGGTCTCCTGCACAGAACAACCTGGAGTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTGTGACGATGCTCAGGTCTCCTGCACAGAACAACCTGGAGTGTC  150

seq1  TCCCAATCGCCATGGTTCCAAATCCTTGAGATGTGCAGCAGGACTAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATCGCCATGGTTCCAAATCCTTGAGATGTGCAGCAGGACTAGACT  200

seq1  TAAAAGATTCTCAGTGTACAACATGCAGCCCTGCCTTGGGCACCAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATTCTCAGTGTACAACATGCAGCCCTGCCTTGGGCACCAAGAAT  250

seq1  GGCTTCAGGGGTGGGTTGGGGTGGGGGA  278
      ||||||||||||||||||||||||||||
seq2  GGCTTCAGGGGTGGGTTGGGGTGGGGGA  278