BAC Information

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BAC

Clone NameB6Ng01-028K10
Chromosome2 (Build37)
Map Location 84,441,483 - 84,599,441
singlet/doubletdoublet
Overlap geneCtnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4
Upstream geneZc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi, LOC672763
Downstream geneSerping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028K10.bB6Ng01-028K10.g
ACCDH859073DH859074
length988868
definitionDH859073|Mus musculus domesticus DNA, BAC clone: B6Ng01-028K10, 5' end.DH859074|Mus musculus domesticus DNA, BAC clone: B6Ng01-028K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,598,856 - 84,599,441)(84,441,483 - 84,442,351)
sequence
gaattctttaaaaacattttgttgacatcataatactaagaacaaatttg
atacattcagctgtaggctgattgctttggtttttcttctgctgctgaca
tccttaatcccagttccagcaacacgtgtatttttgaaaaagacaagcgt
gttgcagagaaagacatatactcctaaaatacccaccttgaagccctact
ttagggcagacagggtcttataaatcagcaaacccactcccatgatcctg
ttcccaaccaagcacctgtgtgacattctaataaagatcagtgggtcgtg
gtttctgtacaattagcatttctgccacatgatggagctattgaagcttt
gtcttgcatactcacgtggccattacccttgaattttggttggtccagac
taatttccttctctcttctttcaaaaaatgaaaaatctcaggaattggca
tacaggttttgtatggggccatgacatctccatatagttctggtttgttg
ttgttgtttgtttgtttgtttgttttactgtgtatgggtgtttggccttc
atgcctgtatgtctgtgtaccacatgcatgcctggtgaccacagaggcca
aaagagggtgttagattgaagaacctgcctgcctccatcttaggctcaaa
aaccatcttacagtagaaataaactaggttcatttctgtttatgattaaa
ctgtttttcatgaattgggctatgccccacctgtaaccttaacaggttca
ggttctgtactgcctgtttcaagaatggtagtcacgtctttgtttcaaaa
agttagtaatcatttgcaaccctgtctttgtttcaaaggggttgttatag
ctaccttgtcaggactacctgttgttacaactaccttgtaatcatgtttt
tgtttctgaagttgttataactaacaagttatgcttatgttctgctcctg
taagcccgcctatttttctgccaaatccccatttggaa
gaattccagttgcattgaatagagcttttagattaaggaaagaaaataag
gaaaaatgtttaaaaaaaattgcacccacatagtagctgcttctctagcc
aagctgtaacactcactacaacagaaaagggtgtaatggaggcatggcct
gattccctgtagcctttcagagatgatgggaactggggacgactaaggag
tcagagtcacagcactccctcctaacagcctcactttgagacttatcggg
atggattttcaccaatcccaactgcacactgttaagcagaagcctgttgt
ggctatgtcagaggctttaacaacacccagtagggacgtgaagttcccta
agttaccactcctcttctttgcttcagctactgggggtcaacagtgggta
agaaaataacaaggtctaacttgcaaaatcatgagaaatgagactgcaga
ggcaaagaaaggcacctggaagagagggaggagatgcaccccaggccaaa
ggcacaaagaagaggcaaagccagggcaactcctaccttacaagggcaaa
gggggaggagctatgtacaagtcttgtaagttggccaacaaatccaggga
aggggaggagagggaggacaagcttataaaggacgaagagagatggggtg
agggggctgaggaaagccagctctgaagcttcctgccagtttcagactaa
ccacttcatgtacattcctcccagaggttcatcttctcaatagacaatct
tttctgtttcttctcaaccagggggttccatggcattctcctttttacaa
atatcttgcaaaacagccaggtcaattatcaggtttatctcaggggtaga
gaggagggttaaggacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84598856_84599441
seq2: B6Ng01-028K10.b_46_631 (reverse)

seq1  ACCAGGCATGCATGTGGTACACAGACATACAGGCATGAAGGCCAAACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCATGCATGTGGTACACAGACATACAGGCATGAAGGCCAAACACC  50

seq1  CATACACAGTAAAACAAACAAACAAACAAACAACAACAACAAACCAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACAGTAAAACAAACAAACAAACAAACAACAACAACAAACCAGAAC  100

seq1  TATATGGAGATGTCATGGCCCCATACAAAACCTGTATGCCAATTCCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGAGATGTCATGGCCCCATACAAAACCTGTATGCCAATTCCTGAG  150

seq1  ATTTTTCATTTTTTGAAAGAAGAGAGAAGGAAATTAGTCTGGACCAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATTTTTTGAAAGAAGAGAGAAGGAAATTAGTCTGGACCAACCA  200

seq1  AAATTCAAGGGTAATGGCCACGTGAGTATGCAAGACAAAGCTTCAATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGGGTAATGGCCACGTGAGTATGCAAGACAAAGCTTCAATAGC  250

seq1  TCCATCATGTGGCAGAAATGCTAATTGTACAGAAACCACGACCCACTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCATGTGGCAGAAATGCTAATTGTACAGAAACCACGACCCACTGAT  300

seq1  CTTTATTAGAATGTCACACAGGTGCTTGGTTGGGAACAGGATCATGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTAGAATGTCACACAGGTGCTTGGTTGGGAACAGGATCATGGGAG  350

seq1  TGGGTTTGCTGATTTATAAGACCCTGTCTGCCCTAAAGTAGGGCTTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTGCTGATTTATAAGACCCTGTCTGCCCTAAAGTAGGGCTTCAAG  400

seq1  GTGGGTATTTTAGGAGTATATGTCTTTCTCTGCAACACGCTTGTCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTATTTTAGGAGTATATGTCTTTCTCTGCAACACGCTTGTCTTTTT  450

seq1  CAAAAATACACGTGTTGCTGGAACTGGGATTAAGGATGTCAGCAGCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATACACGTGTTGCTGGAACTGGGATTAAGGATGTCAGCAGCAGAA  500

seq1  GAAAAACCAAAGCAATCAGCCTACAGCTGAATGTATCAAATTTGTTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCAAAGCAATCAGCCTACAGCTGAATGTATCAAATTTGTTCTTA  550

seq1  GTATTATGATGTCAACAAAATGTTTTTAAAGAATTC  586
      ||||||||||||||||||||||||||||||||||||
seq2  GTATTATGATGTCAACAAAATGTTTTTAAAGAATTC  586

seq1: chr2_84441483_84442351
seq2: B6Ng01-028K10.g_67_934

seq1  GAATTCCAGTTGCATTGAATAGAGCTTTTAGATTAAGGAAAGAAAATAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTGCATTGAATAGAGCTTTTAGATTAAGGAAAGAAAATAAG  50

seq1  GAAAAATGTTTAAAAAAAATTGCACCCACATAGTAGCTGCTTCTCTAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGTTTAAAAAAAATTGCACCCACATAGTAGCTGCTTCTCTAGCC  100

seq1  AAGCTGTAACACTCACTACAACAGAAAAGGGTGTAATGGAGGCATGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTAACACTCACTACAACAGAAAAGGGTGTAATGGAGGCATGGCCT  150

seq1  GATTCCCTGTAGCCTTTCAGAGATGATGGGAACTGGGGACGACTAAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCTGTAGCCTTTCAGAGATGATGGGAACTGGGGACGACTAAGGAG  200

seq1  TCAGAGTCACAGCACTCCCTCCTAACAGCCTCACTTTGAGACTTATCGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTCACAGCACTCCCTCCTAACAGCCTCACTTTGAGACTTATCGGG  250

seq1  ATGGATTTTCACCAATCCCAACTGCACACTGTTAAGCAGAAGCCTGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTTCACCAATCCCAACTGCACACTGTTAAGCAGAAGCCTGTTGT  300

seq1  GGCTATGTCAGAGGCTTTAACAACACCCAGTAGGGACGTGAAGTTCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGTCAGAGGCTTTAACAACACCCAGTAGGGACGTGAAGTTCCCTA  350

seq1  AGTTACCACTCCTCTTCTTTGCTTCAGCTACTGGGGGTCAACAGTGGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCACTCCTCTTCTTTGCTTCAGCTACTGGGGGTCAACAGTGGGTA  400

seq1  AGAAAATAACAAGGTCTAACTTGCAAAATCATGAGAAATGAGACTGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAACAAGGTCTAACTTGCAAAATCATGAGAAATGAGACTGCAGA  450

seq1  GGCAAAGAAAGGCACCTGGAAGAGAGGGAGGAGATGCACCCCAGGCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGAAAGGCACCTGGAAGAGAGGGAGGAGATGCACCCCAGGCCAAA  500

seq1  GGCACAAAGAAGAGGCAAAGCCAGGGCAACTCCTACCTTACAAGGGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAAGAAGAGGCAAAGCCAGGGCAACTCCTACCTTACAAGGGCAAA  550

seq1  GGGGGAGGAGCTATGTACAAGTCTTGTAAGTTGGCCAACAAATCCAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGGAGCTATGTACAAGTCTTGTAAGTTGGCCAACAAATCCAGGGA  600

seq1  AGGGGAGGAGAGGGAGGACAAGCTTATAAAGGACGAAGAGAGATGGGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGAGAGGGAGGACAAGCTTATAAAGGACGAAGAGAGATGGGGTG  650

seq1  AGGGGGCTGAGGAAAGCCAGCTCTGAAGCTTCCTGCCAGTTTCAGACTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCTGAGGAAAGCCAGCTCTGAAGCTTCCTGCCAGTTTCAGACTAA  700

seq1  CCACTTCATGTACATTCCTCCTAGAGGTTCATCTTCTCAATAGACAATC-  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  CCACTTCATGTACATTCCTCCCAGAGGTTCATCTTCTCAATAGACAATCT  750

seq1  TTTCTGTTTCTTCTCAACCAGGGGGTTCCATGGCATTCTCCTTTTTACAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTCTTCTCAACCAGGGGGTTCCATGGCATTCTCCTTTTTACAA  800

seq1  AGCATCTTGCAAAACAGCCAGGTCAAGTTAGCAGGTTTATCACAGGGTAG  849
      |  ||||||||||||||||||||||| ||| |||||||||| |||||   
seq2  A-TATCTTGCAAAACAGCCAGGTCAA-TTATCAGGTTTATCTCAGGGGTA  848

seq1  GAGAGGAGGGTTAAGGACAG  869
      ||||||||||||||||||||
seq2  GAGAGGAGGGTTAAGGACAG  868