BAC Information

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BAC

Clone NameB6Ng01-029O17
Chromosome2 (Build37)
Map Location 142,776,511 - 142,777,220
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029O17.bB6Ng01-029O17.g
ACCDH859977DH859978
length1,253883
definitionDH859977|Mus musculus domesticus DNA, BAC clone: B6Ng01-029O17, 5' end.DH859978|Mus musculus domesticus DNA, BAC clone: B6Ng01-029O17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagttactatagatggagaaaccaaagtattccattacaaaac
caaattcatataatatctttccacaaatccagcccttcaaaggatagtaa
agggaaaactccaacacaaggatggaaatgaccccctagaaaaagcaaga
atgtaaccctttaacaaacctaaaaaacgatagccacaagaacactatgc
cactcgagccccgggctaccttgccagcagagtctcgcccaacaccctca
agggcccacacaggactccccacgggatcctaagacctctggtgagtgga
acacagcgcctgccccaatccaatcacgcggaacctgagactgaggtaca
tagggaagcaggctaccagggcttgacctggggcacaagccccttccact
ccactcgagccccgggctaccttgccagcggagtctcacacaacacctgc
aagggcccacacaggaatccccacgggatgctaagacctctggtgagtgg
aacacagcgccagccccaatccaatcgcgctgaacctgagactgaggtac
atagggaaggaggctgcccgggcctgatctggggcacaagccctttccgc
tccactcgagccccgggctaccttgccagcggagtcgcctgacacccgca
agggcccacacaggattccacacgggatcctaagacctctagtaagtgga
acacaacttctgccaggagtctggttcgaacaccagatatctgggtacct
tccctgcaagaagagagcttgcctgcagagaatactctgcccactgaaac
taaggagagtgataccctccaggtctgcttatggaggctaacagagtcac
ctgaagaacaagctcttaacagtgacaactaaaacagctagcttcggagt
ttaccagatggcgaaaggcaaacataagaatcctactaacagaaatcaga
ccactcaccatcatcagaacgcagcactcccaccccacctagtcctggac
acaccacacaaccgaaaatctagacccagatttaaaaatttctcatgatg
atgatgaggacatcaggaggactttcataagtcactttaagaattaagga
gagccctgctaagagtaattcctaagaaagcggaaacagcaacgtggatc
taagaacgaacctcaaacggttgatgacacatctgactaggggatgacat
gaccacgtaactggatgactggagctgactattgcgactccgatacaatg
aga
gaattctttgttcatctttgagccccattttttaatggggttatttgatt
ttctggagctcaccttcttgaattctttatatatattggatattagtccc
ctgtctgatttggaataggtaaagattcttttccaatctgtaggtggtct
ttctgtcttattgacggtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatcgatcctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcacctgtacccatatcatcgaggcttttccctac
tttctcctctataagtatcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaattctc
attcttctacatgataactgccatttgtgcaccatttgttgaaaatgctg
tcttccccaccccccccccccacgggatggttttagctcccttgtcaaag
atcaagtgaccataggtgtgtgggttcatctctgggtcttcaattctgtt
ccattggtctacttgtctgtcactataccggtaccatgcagtttttatca
caattgctctgtagtgcagctttagttcaggcatggtgattccaccagag
gttcttttatccttgataagagtttttgctatcctatgttttttgttatt
ccagatgaatctgccgattgccctttctaattcgtgctgtattgacagca
tttatcatgtctcatggctgaatattgtgtataatcattcctattgtatt
ttacctgttttgcttataattcatgcttcatttggtcatttctcttccta
ttctttccaacggtaaatctgaagattctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776511_142777220
seq2: B6Ng01-029O17.g_86_802 (reverse)

seq1  ACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACCT  50
      ||||||||||| | |||||  ||| ||||||||||||||||||||||| |
seq2  ACGAATTAGAAAGGGCAATCGGCAGATTCATCTGGAATAACAAAAAACAT  50

seq1  AGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCAC  100
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  AGGATAGCAAAAACTCTTATCAAGGATAAAAGAACCTCTGGTGGAATCAC  100

seq1  CATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCAT  150
      ||||||||| ||||||||  ||||||||||||||||||||||||||||||
seq2  CATGCCTGAACTAAAGCTGCACTACAGAGCAATTGTGATAAAAACTGCAT  150

seq1  GGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGAC  200
      ||||| ||||||| ||||||||||||||||||||||| ||||||||||||
seq2  GGTACCGGTATAGTGACAGACAAGTAGACCAATGGAACAGAATTGAAGAC  200

seq1  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  250
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGC  250

seq1  TAAAACCATCCAGAGG-----------AAGAAAGACAGCATTTTCAACAA  289
      ||||||||||| | ||             | |||||||||||||||||||
seq2  TAAAACCATCCCGTGGGGGGGGGGGGTGGGGAAGACAGCATTTTCAACAA  300

seq1  TTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATC  339
       ||||    |||||| |||  ||||||||||||||||||| |||| ||||
seq2  ATGGT----GCACAAATGGCAGTTATCATGTAGAAGAATGAGAATTGATC  346

seq1  CATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTT  389
      ||| | |||||||||||||||||||||||||||||||||| |||||||| 
seq2  CATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTC  396

seq1  CACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAG  439
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  CACATAAAACCAGAGACACTGATACTTATAGAGGAGAAAGTAGGGAAAAG  446

seq1  CCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGG  489
      ||| || |||||||| ||||| || ||||||||||| |||||||||||||
seq2  CCTCGATGATATGGGTACAGGTGAAAAATTCCTGAATAGAACAGCAATGG  496

seq1  CTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAA  539
      ||||||||||||||||||| || || ||||||||||| || ||| | |||
seq2  CTTGTGCTGTAAGATCGAGGATCGATAAATGGGACCTCATAAAATTGCAA  546

seq1  AGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAAC  589
      || ||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  AGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAGAAAGACCACCTAC  596

seq1  AGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATAT  639
      ||||||| |||| |||||||||||| | |||||||| |||||||||||||
seq2  AGATTGGAAAAGAATCTTTACCTATTCCAAATCAGACAGGGGACTAATAT  646

seq1  CCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAAC  689
      |||| |||||||||||| |||||||||||  || ||||||||||||||||
seq2  CCAATATATATAAAGAATTCAAGAAGGTGAGCTCCAGAAAATCAAATAAC  696

seq1  CCCATTAAAAAATGGGGCTCA  710
      |||||||||||||||||||||
seq2  CCCATTAAAAAATGGGGCTCA  717