BAC Information

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BAC

Clone NameB6Ng01-030G11
Chromosome2 (Build37)
Map Location 142,776,531 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030G11.bB6Ng01-030G11.g
ACCDH860325DH860326
length9941,279
definitionDH860325|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G11, 5' end.DH860326|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagttctc
tatctgatttaggataggtaaagatcctttcccaatctattggtggcctt
tttgtcttattggcggtatcttttgccttacagaagctttgcagtttcat
taggtcccatttgtcaattcttgacctgacagcacaagccattgctcttc
tattcaggaagttttcccttgtgccaatatctttgaggctattccccact
ttgtcctctataagtttcagtgtctggttttatgtggagctccttaatcc
acttagatttgaccttagtacaaggagataggaatggatcaattcgcatt
cttctacatgataaccaccagttgtgccagcaccattcgttgaaaatgct
gtcttttttccactggatggttttagctcccttgtcgaagatcaagtgac
cataggtgtgtgggttcatttctgggtcttcaattctattccattggtct
acttttctgtcattataccagtaccatgccgtttttatcacaattgctct
gtagtaaagctttaggtcaggcatggtgattccaccagaggtacttttat
ccttgagaagagtttttgctatcctaggtttttttgttattccagatgaa
tttgcagattgttctttctaatttattgaagaattgagttggaattttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttaatttctttcttcagagtcttgaagttcttatcataca
gatctttcacttccttagagtcaccgtgtatctatttgccagaaatgact
acatgacttttcaccatgacataatttatctcacatttctactt
gaattctcctctgaggaaacagactgggaggaagaagcagcccattacca
gccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagccagc
gtactgttcaacctccgggcagtcggtttcaaggtccgccctatgcggag
cccccgccctgcgtagtgcgtcagcaatgcgcagagaggcagtgcgcaga
gagacaatgcgcagagaggcaatgcgcagagaggcagtgcacagagaggc
agtgcgcagagagacagtgcgcagagaggcagtgcgcagactcattcatt
cccagagaggaacaaaggaaaatacaacaggcatttccagtctttgaagg
agccgagggtgggcgtgtccacgttccggtagaatacgtgcagattaaag
aactcgccgagtcggtccgtaaatacggaaccaatgctaattttaccttg
gtgcagttagacaggctcgccggcatggcactaactcctgctgactggca
aacgattgtaaaagccgctctccctagtatgggcaaatatatggaatgga
gagctctttggcacgaagctgcacaagcgcaggcccgaacaaacgcagct
gctttgactccagagcagagagattggacttttgacttgttaacgggtca
gggagcttattctgctgatcagacaaactaccattggggagcttatgccc
aaatttcctccacggctattagggcctgaaaggcgctctcccgagcaggt
aaagccactgggcagttaacaagataatccagggacctcaggagtccttc
tcagattttgtgggccagaatgacagaggcagcagagcgtatttttggag
agtcagagcaagccgcgcctctgatagaacagctcatctatgagcaagcc
acaaaggagtgccgagcggccatagccccaagaaagaacaaaggcttaca
agactggctcaggttttgtcgagagcttgggggacctctcagcaatgcag
gtttagcgctgccatccttcaatcccaaaccgccccatgggcagaaataa
tcgaaaacatgtttaactgcggaaagcctggcattttagaaaagaatgcc
aaagctcctgaataacgggagggaccccactctttgctctaaagtatggc
caggtatcataagagcgcaccaggtggctctgctgaagatataagggaat
cttcccacgtatgttcactaccatattgccaactgggaatcaggctgcgt
ccgcgcctgaaaatgtgaaccacgagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776531_142777698
seq2: B6Ng01-030G11.b_46_751 (reverse)

seq1  TGCAAATTCATCTGGAATAAC-AAAAAACCTAGGATAGCAAAAAGTCTTC  49
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  TGCAAATTCATCTGGAATAACAAAAAAACCTAGGATAGCAAAAACTCTTC  50

seq1  TCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTT  99
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAAGGATAAAAGTACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTT  100

seq1  TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAG  149
      |||||||||||||||||||||||||| ||||||||||||||||  |||||
seq2  TACTACAGAGCAATTGTGATAAAAACGGCATGGTACTGGTATAATGACAG  150

seq1  ACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  199
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACA  200

seq1  CCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAG  249
      |||||||||||||||||||||||||||||||||||||||||||| |||| 
seq2  CCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAA  250

seq1  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATG  299
      |||||||||||||||||| | ||||||||||||||||||| |||||||||
seq2  AAAGACAGCATTTTCAACGAATGGTGCTGGCACAACTGGTGGTTATCATG  300

seq1  TAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAAT  349
      |||||||||| |||| ||||||| | ||||||||||||||||||||||||
seq2  TAGAAGAATGCGAATTGATCCATTCCTATCTCCTTGTACTAAGGTCAAAT  350

seq1  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATA  399
      |||||||||| ||||| || |||||||||||  |||||||||||||||||
seq2  CTAAGTGGATTAAGGAGCTCCACATAAAACC--AGACACTGAAACTTATA  398

seq1  GAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATT  449
      ||||| ||||||||||| |||||  ||||||| |||||| |||| || ||
seq2  GAGGACAAAGTGGGGAATAGCCTCAAAGATATTGGCACAAGGGAAAACTT  448

seq1  CCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAAT  499
      |||||| |||| |||||||||||||||||| || || |||||||||||||
seq2  CCTGAATAGAAGAGCAATGGCTTGTGCTGTCAGGTCAAGAATTGACAAAT  498

seq1  GGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAAT  549
      |||||||||||||||| ||||| ||||| ||||||||||| |||| ||||
seq2  GGGACCTAATGAAACTGCAAAGCTTCTGTAAGGCAAAAGATACCGCCAAT  548

seq1  AAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAA  599
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  AAGACAAAAAGGCCACCAATAGATTGGGAAAGGATCTTTACCTATCCTAA  598

seq1  ATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGG  649
      ||||||||| | |||||||||||| |||||||||||||||||||||||||
seq2  ATCAGATAGAGAACTAATATCCAATATATATAAAGAACTCAAGAAGGTGG  648

seq1  ACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCAT  699
      ||| |||||||||||||||||||||| ||||||||||||||         
seq2  ACTCCAGAAAATCAAATAACCCCATT-AAAAATGGGGCTCA---------  688

seq1  CCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGT  749
        ||   || |||||    |||                            
seq2  -GAGCTAAACAAAGA----ATTC---------------------------  706

seq1  TGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACT  799
                                                        
seq2  --------------------------------------------------  706

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACT  849
                                                        
seq2  --------------------------------------------------  706

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAG  899
                                                        
seq2  --------------------------------------------------  706

seq1  GGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGA  949
                                                        
seq2  --------------------------------------------------  706

seq1  ATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGA  999
                                                        
seq2  --------------------------------------------------  706

seq1  CACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTA  1049
                                                        
seq2  --------------------------------------------------  706

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTC  1099
                                                        
seq2  --------------------------------------------------  706

seq1  AAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTC  1149
                                                        
seq2  --------------------------------------------------  706

seq1  AGAACTGAACAAAGAATTC  1168
                         
seq2  -------------------  706