BAC Information

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BAC

Clone NameB6Ng01-030M24
Chromosome2 (Build37)
Map Location 137,608,624 - 137,756,261
singlet/doubletdoublet
Overlap genenone
Upstream geneMkks, 2210009G21Rik, Jag1
Downstream geneBtbd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030M24.bB6Ng01-030M24.g
ACCDH860604DH860605
length1,112709
definitionDH860604|Mus musculus domesticus DNA, BAC clone: B6Ng01-030M24, 5' end.DH860605|Mus musculus domesticus DNA, BAC clone: B6Ng01-030M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,608,624 - 137,609,743)(137,755,553 - 137,756,261)
sequence
gaattcctccttagaacatcctaaaaccctgatcattgttcatgacttag
tgtactgtccatttgtgtggttggctgtgcagtaagaagacaatagtggt
attggctagattctctcacggtgtgatggcgctctagaacattctttgta
tggacagcctccattaaccgtacatgggcttgccattggttagtcatatt
tgttctggaggtagattaaaaattccagaatagtaaattgtccacgtgac
tagtacagttattgtgaccagaacatttgaggacagttaaaaaaaaattt
tttggtatgtttccagaaagttctatccatgtgggttttgcatcaagcac
ttaaccagccatcacagaagtgcaagtgtgtggcaccagataattgttat
ttgttgtgtggaacaaacagagaatagggcatgcaaacactgtcctgact
gttctgattatatggtgccacttctattcagagtgtgtgtttatagtcag
ttaatgatctttgggaaggctcttcatagacatgagtagatttgtattct
aaccacccatctttcccttaaatggtggaattagagagatgactatacat
ttttacttaaaatcaggtagcaaaatacaatgaatctaaagtaatgcatg
gagaattttatcatatactaggaaacataggcaaatactagtgaatggag
tacacttgagtgatagtttcaaaaattagttttaaattttacaaattaaa
aaaaaaccctagtggttctacgtggcacacaaaatctaacaactcagaat
aagacattatattaatctacttggaatatttacaataatcaaacttaatg
agacagttaaagaaagttcgatcacttcagaaagttaagagttcagcttg
ttgtcagatgaagggttggagcaaaataatacaaaaataactgaattcat
ccagatagagctcaaaccaggagaatgaagctgcctgcatagtttgcctc
ctggtaaggagggaagcagatgtgatgagagtcataccgagatgagaaac
agcatggcttggcagaatgcatccacctttgcactgcgaaggacagcata
cctgcctgtttt
gaattccagtattcttgaccatagttatcagttgtttctcttcttgtttc
atatgcacaagttttctggacactttgatatttaaattattcaatccccc
ttctttcaactttttcaatgtagttcttgatgccctagctacagaaataa
gacaagaaaaagaaatcaaaataatataagaggaaaaagtaagccatctc
tgtttccaggtgatataatattgcacataagcaactaactataatctcga
ggaaaacatgtaactctgtgaagaacaaattctctcacatattgcgtgca
gaaatgaccatgtcccattcaatctactttgtagaactggaagtccacta
tttaattttaatccattataatcaaattcctggccccacatgatatacag
gtgtcagagatgttctacttcttaattcaggtagactagtctcaattttt
gtgtttctgactgcaacaactagtatctacctctctatttccactaatat
aatgaaatcaacaatgctaagttatttatatacacagagagtttatgcag
tgaatagttttggggaatagaatatctatatgggtgttgccagctgtcgt
attagtcaatccagacttcatcacttcattgtgtttggcatcatgaagaa
gaggaataaaaaggaagaaggaagaaggaggaggtgatggaggagaagaa
ggaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_137608624_137609743
seq2: B6Ng01-030M24.b_45_1156

seq1  GAATTCCTCCTTAGAACATCCTAAAACCCTGATCATTGTTCATGACTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTTAGAACATCCTAAAACCCTGATCATTGTTCATGACTTAG  50

seq1  TGTACTGTCCATTTGTGTGGTTGGCTGTGCAGTAAGAAGACAATAGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTCCATTTGTGTGGTTGGCTGTGCAGTAAGAAGACAATAGTGGT  100

seq1  ATTGGCTAGATTCTCTCACGGTGTGATGGCGCTCTAGAACATTCTTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTAGATTCTCTCACGGTGTGATGGCGCTCTAGAACATTCTTTGTA  150

seq1  TGGACAGCCTCCATTAACCGTACATGGGCTTGCCATTGGTTAGTCATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGCCTCCATTAACCGTACATGGGCTTGCCATTGGTTAGTCATATT  200

seq1  TGTTCTGGAGGTAGATTAAAAATTCCAGAATAGTAAATTGTCCACGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGGAGGTAGATTAAAAATTCCAGAATAGTAAATTGTCCACGTGAC  250

seq1  TAGTACAGTTATTGTGACCAGAACATTTGAGGACAGTTAAAAAAAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACAGTTATTGTGACCAGAACATTTGAGGACAGTTAAAAAAAAATTT  300

seq1  TTTGGTATGTTTCCAGAAAGTTCTATCCATGTGGGTTTTGCATCAAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATGTTTCCAGAAAGTTCTATCCATGTGGGTTTTGCATCAAGCAC  350

seq1  TTAACCAGCCATCACAGAAGTGCAAGTGTGTGGCACCAGATAATTGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAGCCATCACAGAAGTGCAAGTGTGTGGCACCAGATAATTGTTAT  400

seq1  TTGTTGTGTGGAACAAACAGAGAATAGGGCATGCAAACACTGTCCTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGTGGAACAAACAGAGAATAGGGCATGCAAACACTGTCCTGACT  450

seq1  GTTCTGATTATATGGTGCCACTTCTATTCAGAGTGTGTGTTTATAGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGATTATATGGTGCCACTTCTATTCAGAGTGTGTGTTTATAGTCAG  500

seq1  TTAATGATCTTTGGGAAGGCTCTTCATAGACATGAGTAGATTTGTATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATCTTTGGGAAGGCTCTTCATAGACATGAGTAGATTTGTATTCT  550

seq1  AACCACCCATCTTTCCCTTAAATGGTGGAATTAGAGAGATGACTATACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCCATCTTTCCCTTAAATGGTGGAATTAGAGAGATGACTATACAT  600

seq1  TTTTACTTAAAATCAGGTAGCAAAATACAATGAATCTAAAGTAATGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTAAAATCAGGTAGCAAAATACAATGAATCTAAAGTAATGCATG  650

seq1  GAGAATTTTATCATATACTAGGAAACATAGGCAAATACTAGTGAATGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTTATCATATACTAGGAAACATAGGCAAATACTAGTGAATGGAG  700

seq1  TACACTTGAGTGATAGTTTCAAAAATTAGTTTTAAATTTTACAAATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTGAGTGATAGTTTCAAAAATTAGTTTTAAATTTTACAAATTAAA  750

seq1  AAAAAACCCTAGTGGTTCTACGTGGCACACAAAATCTAACAACTCAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCCTAGTGGTTCTACGTGGCACACAAAATCTAACAACTCAGAAT  800

seq1  AAGACATTATATTAATCTACTTGGAATATTTACAATAATCAAACTTAAAT  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGACATTATATTAATCTACTTGGAATATTTACAATAATCAAACTT-AAT  849

seq1  GAGACAG-TAAAGAAAGTTCGATCACTTCAGAAAGTTAAGAGTTCAGCTT  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGTTAAAGAAAGTTCGATCACTTCAGAAAGTTAAGAGTTCAGCTT  899

seq1  GTTGTCAGATGAAGGGTTGGAGCAAATAAATACATAAAT-ACTGAATTTC  948
      ||||||||||||||||||||||||||  |||||| |||| |||||| |||
seq2  GTTGTCAGATGAAGGGTTGGAGCAAAATAATACAAAAATAACTGAA-TTC  948

seq1  ATCCAGATAGAGCTCAAACCAGGAAGAATGAAGCTGCCTTGCATAGGTTT  998
      ||||||||||||||||||||||| |||||||||||||| |||||| ||||
seq2  ATCCAGATAGAGCTCAAACCAGG-AGAATGAAGCTGCC-TGCATA-GTTT  995

seq1  GCCTCCTTGGTAAGGAGGGAAGCAGATAGTGATGAGAGTCGATACAGAGA  1048
      |||||| |||||||||||||||||||| |||||||||||| |||| ||||
seq2  GCCTCC-TGGTAAGGAGGGAAGCAGAT-GTGATGAGAGTC-ATACCGAGA  1042

seq1  TGAGAAACAGCAT-GCTTTGCAGAATGCATCCACCTTTTGCACTGCAGAG  1097
      ||||||||||||| |||| |||||||||||||||| ||||||||||  | 
seq2  TGAGAAACAGCATGGCTTGGCAGAATGCATCCACC-TTTGCACTGCGAA-  1090

seq1  TGAACAGCATTACCTG-CTGTTTT  1120
       | |||||| |||||| |||||||
seq2  -GGACAGCA-TACCTGCCTGTTTT  1112

seq1: chr2_137755553_137756261
seq2: B6Ng01-030M24.g_68_776 (reverse)

seq1  TCCTCCTCCTTCTTCTCCTCCATCACCTCCTCCTTCTTCCTTCTTCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTTCTTCTCCTCCATCACCTCCTCCTTCTTCCTTCTTCCTTT  50

seq1  TTATTCCTCTTCTTCATGATGCCAAACACAATGAAGTGATGAAGTCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTCTTCTTCATGATGCCAAACACAATGAAGTGATGAAGTCTGGA  100

seq1  TTGACTAATACGACAGCTGGCAACACCCATATAGATATTCTATTCCCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTAATACGACAGCTGGCAACACCCATATAGATATTCTATTCCCCAA  150

seq1  AACTATTCACTGCATAAACTCTCTGTGTATATAAATAACTTAGCATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTCACTGCATAAACTCTCTGTGTATATAAATAACTTAGCATTGTT  200

seq1  GATTTCATTATATTAGTGGAAATAGAGAGGTAGATACTAGTTGTTGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATTATATTAGTGGAAATAGAGAGGTAGATACTAGTTGTTGCAGT  250

seq1  CAGAAACACAAAAATTGAGACTAGTCTACCTGAATTAAGAAGTAGAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACACAAAAATTGAGACTAGTCTACCTGAATTAAGAAGTAGAACAT  300

seq1  CTCTGACACCTGTATATCATGTGGGGCCAGGAATTTGATTATAATGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACACCTGTATATCATGTGGGGCCAGGAATTTGATTATAATGGATT  350

seq1  AAAATTAAATAGTGGACTTCCAGTTCTACAAAGTAGATTGAATGGGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAATAGTGGACTTCCAGTTCTACAAAGTAGATTGAATGGGACAT  400

seq1  GGTCATTTCTGCACGCAATATGTGAGAGAATTTGTTCTTCACAGAGTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTTCTGCACGCAATATGTGAGAGAATTTGTTCTTCACAGAGTTAC  450

seq1  ATGTTTTCCTCGAGATTATAGTTAGTTGCTTATGTGCAATATTATATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCCTCGAGATTATAGTTAGTTGCTTATGTGCAATATTATATCAC  500

seq1  CTGGAAACAGAGATGGCTTACTTTTTCCTCTTATATTATTTTGATTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAACAGAGATGGCTTACTTTTTCCTCTTATATTATTTTGATTTCTT  550

seq1  TTTCTTGTCTTATTTCTGTAGCTAGGGCATCAAGAACTACATTGAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTCTTATTTCTGTAGCTAGGGCATCAAGAACTACATTGAAAAAG  600

seq1  TTGAAAGAAGGGGGATTGAATAATTTAAATATCAAAGTGTCCAGAAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAAGGGGGATTGAATAATTTAAATATCAAAGTGTCCAGAAAACT  650

seq1  TGTGCATATGAAACAAGAAGAGAAACAACTGATAACTATGGTCAAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATATGAAACAAGAAGAGAAACAACTGATAACTATGGTCAAGAATA  700

seq1  CTGGAATTC  709
      |||||||||
seq2  CTGGAATTC  709