BAC Information

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BAC

Clone NameB6Ng01-031H14
Chromosome2 (Build37)
Map Location 142,776,618 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031H14.g
ACCDH861076
length951
definitionDH861076|Mus musculus domesticus DNA, BAC clone: B6Ng01-031H14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccacaggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaaactttaggtcttcatattgattttcatagtggctgtact
agtattcatttccaccaaaaatggatgagagttatttcttcacatccttg
ctcaaatttgttatgtttaatttgttaatggtatccattctgactggcat
aaaatgaaatctcaaagtgattgtataatgcgtttctatggaggatgtgg
atgcaaagcatgttataaaatatttgtcagttctttgaggcagtgttgat
gaaattaatgaaatgcgggcaaaaagaattacataaagactctacaaaga
aaagtgtttgcttttttaaaaagataacagatgacagtctttagtcatgc
t
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776618_142777698
seq2: B6Ng01-031H14.g_69_689 (reverse)

seq1  GACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTG  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAAGTTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTG  50

seq1  GTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAA  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGATCCAGAAA  100

seq1  TGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACC  150

seq1  ATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTG  200
      |||| | |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTG  200

seq1  GTTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTA  250
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  GTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTA  250

seq1  CTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACA  300

seq1  CTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAC  350

seq1  AGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGA  400
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGA  400

seq1  GAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAA  450
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAA  450

seq1  GACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTT  500

seq1  TACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAAC  550

seq1  TCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGC  600

seq1  TCACAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCT  650
      ||| ||            ||| |||||    |||                
seq2  TCAGAA----------CTGAACAAAGA----ATTC---------------  621

seq1  GGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTA  700
                                                        
seq2  --------------------------------------------------  621

seq1  TCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAA  750
                                                        
seq2  --------------------------------------------------  621

seq1  ACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAG  800
                                                        
seq2  --------------------------------------------------  621

seq1  ATATGGGCACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCT  850
                                                        
seq2  --------------------------------------------------  621

seq1  GTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTG  900
                                                        
seq2  --------------------------------------------------  621

seq1  CAAGGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGG  950
                                                        
seq2  --------------------------------------------------  621

seq1  AAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATA  1000
                                                        
seq2  --------------------------------------------------  621

seq1  TATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAA  1050
                                                        
seq2  --------------------------------------------------  621

seq1  AAAATGGGGCTCAGAACTGAACAAAGAATTC  1081
                                     
seq2  -------------------------------  621